MGE detailed information
MGE type: Genomic_island MGE length: 30286 bp
Accession: NZ_CP017311 Location: 4578820..4609105 Organism: Hydrogenophaga sp. PBC Replicon: chromosome
Accession: NZ_CP017311 Location: 4578820..4609105 Organism: Hydrogenophaga sp. PBC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Q5W_RS21740 () | 4574238..4575350 | - | 1113 | WP_009519422.1 | alanine racemase | - |
| Q5W_RS21745 () | 4575540..4576811 | + | 1272 | WP_009519423.1 | lysophospholipid transporter LplT | - |
| Q5W_RS21750 () | 4576821..4578101 | - | 1281 | WP_009519424.1 | response regulator transcription factor | - |
| Q5W_RS21755 () | 4578275..4578760 | + | 486 | WP_009519425.1 | glutathione peroxidase | - |
| Q5W_RS21760 () | 4578820..4579602 | - | 783 | WP_009519426.1 | hypothetical protein | - |
| Q5W_RS21765 () | 4579842..4580264 | + | 423 | WP_009519427.1 | CesT family type III secretion system chaperone | - |
| Q5W_RS21770 () | 4580281..4581021 | - | 741 | WP_009519428.1 | LrgB family protein | - |
| Q5W_RS21775 () | 4581018..4581380 | - | 363 | WP_009519429.1 | CidA/LrgA family protein | - |
| Q5W_RS21780 () | 4581387..4582619 | - | 1233 | WP_009519430.1 | glycolate oxidase subunit GlcF | - |
| Q5W_RS21785 () | 4582621..4583778 | - | 1158 | WP_009519431.1 | glycolate oxidase subunit GlcE | - |
| Q5W_RS21790 () | 4583860..4584102 | - | 243 | WP_009519432.1 | hypothetical protein | - |
| Q5W_RS21795 () | 4584264..4585673 | - | 1410 | WP_009519433.1 | ammonium transporter | - |
| Q5W_RS21800 () | 4585710..4586048 | - | 339 | WP_035621567.1 | P-II family nitrogen regulator | - |
| Q5W_RS25495 () | 4586326..4586571 | + | 246 | Protein_4369 | ATP-dependent protease | - |
| Q5W_RS21810 () | 4587030..4587428 | + | 399 | WP_009519436.1 | hypothetical protein | - |
| Q5W_RS26065 () | 4587915..4588433 | + | 519 | Protein_4371 | hypothetical protein | - |
| Q5W_RS21815 () | 4588572..4589477 | - | 906 | Protein_4372 | IS21 family transposase ISAlisp1 | Transposase |
| Q5W_RS21820 () | 4589572..4590798 | + | 1227 | WP_158515856.1 | IS66 family transposase ISPpu19 | Transposase |
| Q5W_RS21825 () | 4590795..4591286 | + | 492 | WP_009520310.1 | hypothetical protein | - |
| Q5W_RS21830 () | 4591268..4591504 | - | 237 | WP_148663200.1 | hypothetical protein | - |
| Q5W_RS21835 () | 4591533..4591952 | - | 420 | WP_009520625.1 | hypothetical protein | - |
| Q5W_RS21840 () | 4592169..4592516 | - | 348 | WP_009520626.1 | KTSC domain-containing protein | - |
| Q5W_RS21845 () | 4592717..4593341 | + | 625 | Protein_4378 | tyrosine-type recombinase/integrase | - |
| Q5W_RS21850 () | 4593580..4594023 | - | 444 | WP_039879158.1 | helix-turn-helix domain-containing protein | - |
| Q5W_RS21855 () | 4594198..4594635 | - | 438 | WP_009520629.1 | HU family DNA-binding protein | - |
| Q5W_RS21860 () | 4594925..4595170 | + | 246 | WP_148663214.1 | hypothetical protein | - |
| Q5W_RS21865 () | 4595156..4596364 | - | 1209 | WP_009520631.1 | hypothetical protein ; Integrase | Integrase |
| Q5W_RS21870 () | 4596532..4599447 | - | 2916 | WP_069903069.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| Q5W_RS21875 () | 4599608..4600240 | + | 633 | WP_069903070.1 | MCP four helix bundle domain-containing protein | - |
| Q5W_RS21880 () | 4600300..4600566 | + | 267 | WP_009520731.1 | hypothetical protein | - |
| Q5W_RS21890 () | 4601620..4601940 | + | 321 | WP_009520730.1 | hypothetical protein | - |
| Q5W_RS21895 () | 4601990..4602823 | - | 834 | WP_009520741.1 | IS21 family transposase ISLisp1 | Transposase |
| Q5W_RS21900 () | 4602820..4604343 | - | 1524 | WP_030093096.1 | IS21 family transposase ISAlisp1 | Transposase |
| Q5W_RS21905 () | 4604514..4604969 | + | 456 | WP_069903071.1 | hypothetical protein | - |
| Q5W_RS25895 () | 4605101..4605280 | - | 180 | WP_009515042.1 | hypothetical protein | - |
| Q5W_RS21915 () | 4605587..4606927 | - | 1341 | WP_009515044.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| Q5W_RS21920 () | 4606933..4607247 | - | 315 | WP_009515046.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| Q5W_RS21925 () | 4607473..4607967 | - | 495 | WP_039877498.1 | hypothetical protein | - |
| Q5W_RS21930 () | 4607967..4608407 | - | 441 | WP_009515050.1 | hypothetical protein | - |
| Q5W_RS21935 () | 4608563..4609105 | - | 543 | WP_009515052.1 | helix-turn-helix domain-containing protein | - |
| Q5W_RS21940 () | 4609380..4610657 | + | 1278 | WP_081921957.1 | YifB family Mg chelatase-like AAA ATPase | - |
| Q5W_RS21945 () | 4610662..4613358 | - | 2697 | WP_035622173.1 | methionine synthase | - |
| Q5W_RS21950 () | 4613623..4614069 | + | 447 | WP_009515055.1 | hemerythrin-like metal-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|