MGE detailed information
MGE type: Genomic_island MGE length: 21646 bp
Accession: NZ_CP017311 Location: 4113155..4134800 Organism: Hydrogenophaga sp. PBC Replicon: chromosome
Accession: NZ_CP017311 Location: 4113155..4134800 Organism: Hydrogenophaga sp. PBC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Q5W_RS19525 () | 4108326..4110122 | + | 1797 | WP_069903044.1 | branched-chain amino acid ABC transporter ATP-binding protein/permease | - |
| Q5W_RS19530 () | 4110125..4110853 | + | 729 | WP_009517734.1 | ABC transporter ATP-binding protein | - |
| Q5W_RS19535 () | 4110864..4112540 | + | 1677 | WP_009517733.1 | acyl-CoA dehydrogenase family protein | - |
| Q5W_RS19545 () | 4113155..4113655 | - | 501 | WP_003098996.1 | DUF305 domain-containing protein | - |
| Q5W_RS19550 () | 4114108..4114854 | + | 747 | WP_009517731.1 | hypothetical protein | - |
| Q5W_RS19555 () | 4114973..4115185 | + | 213 | WP_003090093.1 | AlpA family transcriptional regulator | - |
| Q5W_RS19560 () | 4115228..4116103 | + | 876 | WP_009517730.1 | Sporulation initiation inhibitor protein Soj | VF |
| Q5W_RS19565 () | 4116087..4116356 | + | 270 | WP_009517729.1 | hypothetical protein | - |
| Q5W_RS19570 () | 4116349..4118028 | + | 1680 | WP_009517728.1 | ParB family protein | - |
| Q5W_RS19575 () | 4118043..4118603 | + | 561 | WP_009517727.1 | DUF2857 domain-containing protein | - |
| Q5W_RS19580 () | 4118607..4119818 | + | 1212 | WP_009517726.1 | hypothetical protein | - |
| Q5W_RS19585 () | 4119959..4121482 | + | 1524 | WP_030093096.1 | IS21 family transposase ISAlisp1 | Transposase |
| Q5W_RS19590 () | 4121479..4122312 | + | 834 | WP_009520741.1 | IS21 family transposase ISLisp1 | Transposase |
| Q5W_RS19595 () | 4122385..4122699 | - | 315 | Protein_3927 | ATPase | - |
| Q5W_RS19600 () | 4122709..4123434 | - | 726 | WP_003050273.1 | CBASS effector endonuclease NucC | - |
| Q5W_RS19605 () | 4123473..4124375 | - | 903 | WP_003090158.1 | nucleotidyltransferase domain-containing protein | - |
| Q5W_RS19610 () | 4124375..4124719 | - | 345 | Protein_3930 | HORMA domain containing protein | - |
| Q5W_RS19615 () | 4124795..4125487 | + | 693 | WP_009520510.1 | IS6 family transposase ISYps1 | Transposase |
| Q5W_RS19620 () | 4125547..4127037 | - | 1491 | Protein_3932 | conjugative transfer ATPase | - |
| Q5W_RS19625 () | 4127037..4127486 | - | 450 | WP_009516217.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| Q5W_RS19630 () | 4127467..4128897 | - | 1431 | WP_009516218.1 | TIGR03752 family integrating conjugative element protein | - |
| Q5W_RS19635 () | 4128887..4129795 | - | 909 | WP_009516219.1 | TIGR03749 family integrating conjugative element protein | - |
| Q5W_RS19640 () | 4129792..4130484 | - | 693 | WP_009516220.1 | TIGR03746 family integrating conjugative element protein | - |
| Q5W_RS19645 () | 4130481..4130879 | - | 399 | WP_009516221.1 | TIGR03750 family conjugal transfer protein | - |
| Q5W_RS19650 () | 4130891..4131250 | - | 360 | WP_003090173.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| Q5W_RS19655 () | 4131267..4131500 | - | 234 | WP_003050225.1 | TIGR03758 family integrating conjugative element protein | - |
| Q5W_RS19660 () | 4131497..4131880 | - | 384 | WP_009516222.1 | RAQPRD family integrative conjugative element protein | - |
| Q5W_RS19665 () | 4132084..4132554 | + | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| Q5W_RS19670 () | 4132551..4133126 | + | 576 | WP_003153636.1 | PIN domain-containing protein | Toxin Detail |
| Q5W_RS19675 () | 4133144..4134058 | + | 915 | WP_003050256.1 | AAA family ATPase | - |
| Q5W_RS19680 () | 4134055..4134525 | + | 471 | WP_003090160.1 | hypothetical protein | - |
| Q5W_RS25430 () | 4134522..4134683 | + | 162 | Protein_3945 | HORMA domain containing protein | - |
| Q5W_RS19685 () | 4134742..4135434 | - | 693 | WP_009520510.1 | IS6 family transposase | - |
| Q5W_RS19690 () | 4135545..4136300 | + | 756 | WP_084463011.1 | LysR family transcriptional regulator | - |
| Q5W_RS19695 () | 4136392..4137474 | + | 1083 | WP_009515030.1 | TRAP transporter substrate-binding protein DctP | - |
| Q5W_RS19700 () | 4137566..4137817 | + | 252 | WP_009515028.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| Q5W_RS19705 () | 4137854..4138243 | + | 390 | WP_050980552.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Q5W_RS19710 () | 4138248..4139171 | + | 924 | WP_009515023.1 | delta(1)-pyrroline-2-carboxylate reductase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|