MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 36931 bp
Accession: NZ_CP017263 Location: 1..36931 Organism: Lacticaseibacillus paracasei strain FAM18149 Replicon: plasmid pFAM18149.22
Accession: NZ_CP017263 Location: 1..36931 Organism: Lacticaseibacillus paracasei strain FAM18149 Replicon: plasmid pFAM18149.22
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FAM18149p_RS14720 () | 471..2150 | + | 1680 | WP_003603889.1 | alpha-glucosidase | - |
| FAM18149p_RS14725 () | 2552..3714 | + | 1163 | WP_096836623.1 | IS3 family transposase ISL1 | Transposase |
| FAM18149p_RS14730 () | 4405..4773 | + | 369 | WP_016386228.1 | YxeA family protein | - |
| FAM18149p_RS14735 () | 4901..5143 | + | 243 | WP_016363783.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| FAM18149p_RS14740 () | 5136..5417 | + | 282 | WP_096836625.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| FAM18149p_RS14745 () | 5554..5871 | + | 318 | Protein_6 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| FAM18149p_RS14750 () | 5932..6099 | - | 168 | Protein_7 | IS256 family transposase | - |
| FAM18149p_RS14760 () | 6954..7310 | + | 357 | Protein_9 | DDE-type integrase/transposase/recombinase | - |
| FAM18149p_RS14765 () | 7547..8497 | + | 951 | WP_096836630.1 | magnesium transporter CorA family protein | - |
| FAM18149p_RS14775 () | 8825..9126 | + | 302 | Protein_11 | IS3 family transposase IS153 | Transposase |
| FAM18149p_RS14780 () | 9164..9655 | + | 492 | WP_096836632.1 | replication protein | - |
| FAM18149p_RS14785 () | 9678..10352 | + | 675 | WP_096836633.1 | hypothetical protein | - |
| FAM18149p_RS14790 () | 10368..11783 | - | 1416 | WP_096836402.1 | IS5 family transposase ISLca2 | Transposase |
| FAM18149p_RS14795 () | 12449..12844 | + | 396 | WP_096836635.1 | hypothetical protein | - |
| FAM18149p_RS14800 () | 12858..13019 | + | 162 | WP_096836637.1 | Plasmid recombination enzyme | Relaxase |
| FAM18149p_RS14805 () | 13150..13248 | + | 99 | WP_096836640.1 | Ltp family lipoprotein | - |
| FAM18149p_RS14810 () | 13324..14133 | + | 810 | WP_096836643.1 | DUF3800 domain-containing protein | - |
| FAM18149p_RS14815 () | 14154..14639 | + | 486 | WP_096836645.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| FAM18149p_RS14820 () | 14859..15770 | - | 912 | Protein_20 | ISL3 family transposase ISL3 | Transposase |
| FAM18149p_RS14825 () | 15770..16513 | + | 744 | Protein_21 | IS30 family transposase ISApl1 | Transposase |
| FAM18149p_RS14830 () | 16618..17175 | - | 558 | WP_016372361.1 | YdhK family protein | - |
| FAM18149p_RS14835 () | 17357..17608 | - | 252 | WP_016383003.1 | PspC domain-containing protein | - |
| FAM18149p_RS14840 () | 17711..18238 | + | 528 | Protein_24 | IS30 family transposase ISSag3 | Transposase |
| FAM18149p_RS14845 () | 18257..20317 | - | 2061 | WP_096836648.1 | Mobilization protein A | Relaxase |
| FAM18149p_RS14850 () | 20569..20796 | + | 228 | WP_183406791.1 | hypothetical protein | - |
| FAM18149p_RS14855 () | 20819..21097 | + | 279 | WP_070792629.1 | hypothetical protein | - |
| FAM18149p_RS14860 () | 21087..21767 | - | 681 | WP_096836651.1 | zeta toxin family protein | - |
| FAM18149p_RS14865 () | 21764..21949 | - | 186 | WP_010620892.1 | hypothetical protein | - |
| FAM18149p_RS14870 () | 21996..22277 | - | 282 | WP_010014831.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| FAM18149p_RS14875 () | 22504..23010 | - | 507 | Protein_31 | plasmid replication initiation protein | - |
| FAM18149p_RS14885 () | 23164..23847 | + | 684 | WP_096836653.1 | IS6 family transposase ISBth20 | Transposase |
| FAM18149p_RS14890 () | 24004..25074 | - | 1071 | WP_020751785.1 | replication initiator protein A | - |
| FAM18149p_RS14895 () | 25497..26264 | + | 768 | WP_020751805.1 | Sporulation initiation inhibitor protein Soj | VF |
| FAM18149p_RS14900 () | 26275..26658 | + | 384 | WP_016370074.1 | hypothetical protein | - |
| FAM18149p_RS14905 () | 26733..27095 | - | 363 | WP_020751804.1 | hypothetical protein | - |
| FAM18149p_RS14910 () | 27088..27333 | - | 246 | Protein_37 | DNA polymerase | - |
| FAM18149p_RS14915 () | 27402..28085 | + | 684 | WP_002816607.1 | IS6 family transposase ISBth20 | Transposase |
| FAM18149p_RS16105 () | 28196..28990 | + | 795 | WP_123018129.1 | IS3 family transposase ISBce13 | Transposase |
| FAM18149p_RS14925 () | 29195..30874 | + | 1680 | WP_096836656.1 | D-lactate dehydrogenase | - |
| FAM18149p_RS14930 () | 31016..31771 | + | 756 | WP_096836659.1 | hypothetical protein | - |
| FAM18149p_RS14935 () | 31895..33310 | + | 1416 | WP_016377552.1 | IS5 family transposase ISLca2 | Transposase |
| FAM18149p_RS14940 () | 33324..33989 | + | 666 | Protein_43 | D-2-hydroxyacid dehydrogenase | - |
| FAM18149p_RS14950 () | 34061..34744 | + | 684 | WP_002816607.1 | IS6 family transposase ISBth20 | Transposase |
| FAM18149p_RS14955 () | 34936..35886 | - | 951 | WP_003592282.1 | LacI family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|