MGE detailed information
MGE type: Prophage MGE length: 67613 bp
Accession: NZ_CP017236 Location: 1566752..1634364 Organism: Yersinia ruckeri strain QMA0440 isolate 14/0165-5k Replicon: chromosome
Accession: NZ_CP017236 Location: 1566752..1634364 Organism: Yersinia ruckeri strain QMA0440 isolate 14/0165-5k Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMA0440_RS07165 () | 1563286..1563609 | + | 324 | WP_004721744.1 | YebG family protein | - |
| QMA0440_RS07170 () | 1563650..1563958 | + | 309 | WP_004721742.1 | N(4)-acetylcytidine aminohydrolase | - |
| QMA0440_RS07175 () | 1564042..1564407 | + | 366 | WP_004721741.1 | hypothetical protein | - |
| QMA0440_RS07180 () | 1564716..1566746 | + | 2031 | WP_004721737.1 | prolyl oligopeptidase family serine peptidase | - |
| QMA0440_RS07185 () | 1566752..1567414 | - | 663 | WP_038243340.1 | exodeoxyribonuclease X | - |
| QMA0440_RS07190 () | 1568281..1569231 | + | 951 | WP_038243342.1 | prolyl aminopeptidase | - |
| QMA0440_RS07195 () | 1569354..1569584 | - | 231 | WP_038243344.1 | DNA polymerase III subunit theta | - |
| QMA0440_RS07200 () | 1569987..1570502 | + | 516 | WP_004721727.1 | non-heme ferritin | - |
| QMA0440_RS07205 () | 1570907..1571293 | + | 387 | WP_038243346.1 | CopC domain-containing protein YobA | - |
| QMA0440_RS07210 () | 1571295..1572179 | + | 885 | WP_004721723.1 | copper homeostasis membrane protein CopD | - |
| QMA0440_RS07215 () | 1572274..1572615 | + | 342 | WP_004721721.1 | YebY family protein | - |
| - () | 1572725..1572875 | - | 151 | - | - | Antitoxin Detail |
| - () | 1572774..1572867 | + | 94 | - | - | Toxin Detail |
| QMA0440_RS07220 () | 1572943..1574052 | - | 1110 | WP_038243348.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| QMA0440_RS07225 () | 1574027..1574296 | - | 270 | WP_038243350.1 | excisionase | - |
| QMA0440_RS07230 () | 1574653..1575165 | - | 513 | WP_038243351.1 | hypothetical protein | - |
| QMA0440_RS18145 () | 1575165..1575338 | - | 174 | WP_170854680.1 | hypothetical protein | - |
| QMA0440_RS07235 () | 1575423..1575677 | - | 255 | WP_038243353.1 | hypothetical protein | - |
| QMA0440_RS07240 () | 1575674..1576210 | - | 537 | WP_038243354.1 | hypothetical protein | - |
| QMA0440_RS07245 () | 1576210..1576689 | - | 480 | WP_051847014.1 | hypothetical protein | - |
| QMA0440_RS07250 () | 1576686..1576922 | - | 237 | WP_038243357.1 | hypothetical protein | - |
| QMA0440_RS07255 () | 1576919..1577254 | - | 336 | WP_038243358.1 | hypothetical protein | - |
| QMA0440_RS07260 () | 1577268..1578071 | - | 804 | WP_051847017.1 | hypothetical protein | - |
| QMA0440_RS07265 () | 1578160..1578588 | - | 429 | WP_038243361.1 | hypothetical protein | - |
| QMA0440_RS07270 () | 1578585..1579724 | - | 1140 | WP_038243363.1 | hypothetical protein | - |
| QMA0440_RS07275 () | 1579769..1581373 | - | 1605 | WP_038243366.1 | YqaJ viral recombinase family protein | - |
| QMA0440_RS07280 () | 1581360..1582163 | - | 804 | WP_087931105.1 | phage recombination protein Bet | - |
| QMA0440_RS07285 () | 1582530..1583162 | + | 633 | WP_051847015.1 | hypothetical protein | - |
| QMA0440_RS07290 () | 1583151..1583441 | - | 291 | WP_038243372.1 | hypothetical protein | - |
| QMA0440_RS07295 () | 1583500..1583760 | - | 261 | WP_038243374.1 | KTSC domain-containing protein | - |
| QMA0440_RS07300 () | 1583836..1584081 | - | 246 | WP_038243377.1 | hypothetical protein | - |
| QMA0440_RS07305 () | 1584603..1585217 | - | 615 | WP_038243379.1 | zinc ribbon domain-containing protein | - |
| QMA0440_RS07310 () | 1585228..1585914 | - | 687 | WP_038243382.1 | helix-turn-helix domain-containing protein | - |
| QMA0440_RS07315 () | 1586045..1586290 | + | 246 | WP_038243385.1 | hypothetical protein | - |
| QMA0440_RS07320 () | 1586372..1586677 | - | 306 | WP_038243388.1 | hypothetical protein | - |
| QMA0440_RS07325 () | 1586763..1587125 | + | 363 | WP_038243391.1 | hypothetical protein | - |
| QMA0440_RS07330 () | 1587122..1587301 | + | 180 | WP_038243394.1 | hypothetical protein | - |
| QMA0440_RS07335 () | 1587310..1588155 | + | 846 | WP_038243397.1 | hypothetical protein | - |
| QMA0440_RS07340 () | 1588158..1588931 | + | 774 | WP_038243398.1 | hypothetical protein | - |
| QMA0440_RS07345 () | 1588935..1590071 | + | 1137 | WP_038243401.1 | recombination-associated protein RdgC | - |
| QMA0440_RS07350 () | 1590071..1590427 | + | 357 | WP_038243404.1 | hypothetical protein | - |
| QMA0440_RS07355 () | 1590420..1591085 | + | 666 | WP_038243407.1 | phage N-6-adenine-methyltransferase | - |
| QMA0440_RS07360 () | 1591082..1591729 | + | 648 | WP_087931051.1 | DUF1367 family protein | - |
| QMA0440_RS07365 () | 1591740..1592174 | + | 435 | WP_038245410.1 | hypothetical protein | - |
| QMA0440_RS07370 () | 1592167..1592475 | + | 309 | WP_071665737.1 | DUF1364 domain-containing protein | - |
| QMA0440_RS07375 () | 1592498..1593088 | + | 591 | WP_038245411.1 | hypothetical protein | - |
| QMA0440_RS07380 () | 1593126..1593593 | + | 468 | WP_051847065.1 | VRR-NUC domain-containing protein | - |
| QMA0440_RS07385 () | 1593637..1593966 | + | 330 | WP_038246022.1 | hypothetical protein | - |
| QMA0440_RS07390 () | 1593988..1594599 | - | 612 | WP_038246024.1 | hypothetical protein | - |
| QMA0440_RS07395 () | 1594725..1595534 | + | 810 | WP_038245275.1 | hypothetical protein | - |
| QMA0440_RS07400 () | 1595707..1595919 | + | 213 | WP_038245276.1 | class II holin family protein | - |
| QMA0440_RS07405 () | 1595919..1596407 | + | 489 | WP_087931052.1 | lysozyme | - |
| QMA0440_RS07410 () | 1596539..1597081 | + | 543 | WP_038245278.1 | DUF2570 domain-containing protein | - |
| QMA0440_RS07415 () | 1597078..1597422 | + | 345 | WP_051847063.1 | hypothetical protein | - |
| QMA0440_RS07420 () | 1597488..1598345 | + | 858 | WP_038245280.1 | hypothetical protein | - |
| QMA0440_RS07425 () | 1598332..1600047 | + | 1716 | WP_038245282.1 | terminase | - |
| QMA0440_RS07430 () | 1600047..1602173 | + | 2127 | WP_038245283.1 | hypothetical protein | - |
| QMA0440_RS07435 () | 1602444..1603493 | + | 1050 | WP_038245284.1 | hypothetical protein | - |
| QMA0440_RS07440 () | 1603554..1604777 | + | 1224 | WP_038245287.1 | N4-gp56 family major capsid protein | - |
| QMA0440_RS07445 () | 1604840..1605223 | + | 384 | WP_038245289.1 | hypothetical protein | - |
| QMA0440_RS07450 () | 1605278..1605718 | + | 441 | WP_038245291.1 | hypothetical protein | - |
| QMA0440_RS07455 () | 1605721..1606308 | + | 588 | WP_038245293.1 | hypothetical protein | - |
| QMA0440_RS07460 () | 1606308..1606961 | + | 654 | WP_038245295.1 | hypothetical protein | - |
| QMA0440_RS07465 () | 1606958..1609327 | + | 2370 | WP_087931054.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QMA0440_RS18150 () | 1609712..1609858 | + | 147 | WP_157836125.1 | hypothetical protein | - |
| QMA0440_RS07475 () | 1611351..1612979 | + | 1629 | WP_038246006.1 | hypothetical protein | - |
| QMA0440_RS07480 () | 1612976..1614190 | + | 1215 | WP_038246004.1 | DUF1983 domain-containing protein | - |
| QMA0440_RS07485 () | 1614257..1615285 | + | 1029 | WP_087931056.1 | hypothetical protein | - |
| QMA0440_RS07490 () | 1615260..1615634 | + | 375 | WP_087931057.1 | hypothetical protein | - |
| QMA0440_RS07495 () | 1615890..1616549 | + | 660 | WP_038242749.1 | hypothetical protein | - |
| QMA0440_RS07500 () | 1616552..1616935 | + | 384 | WP_038242747.1 | hypothetical protein | - |
| QMA0440_RS07505 () | 1616935..1617195 | + | 261 | WP_038242746.1 | hypothetical protein | - |
| QMA0440_RS07510 () | 1617208..1618596 | + | 1389 | WP_038242745.1 | hypothetical protein | - |
| QMA0440_RS18155 () | 1618671..1618832 | + | 162 | WP_157836120.1 | hypothetical protein | - |
| QMA0440_RS07515 () | 1619098..1627338 | + | 8241 | WP_051847002.1 | hypothetical protein | - |
| QMA0440_RS07520 () | 1627574..1628935 | - | 1362 | WP_038242744.1 | hypothetical protein | - |
| QMA0440_RS07525 () | 1629671..1629919 | + | 249 | WP_038242742.1 | hypothetical protein | - |
| QMA0440_RS07530 () | 1629941..1630594 | + | 654 | WP_038242741.1 | hypothetical protein | - |
| QMA0440_RS07545 () | 1631261..1631740 | - | 480 | WP_131474293.1 | hypothetical protein | - |
| QMA0440_RS07550 () | 1632015..1632182 | - | 168 | WP_170854656.1 | hypothetical protein | - |
| QMA0440_RS07555 () | 1632492..1633100 | - | 609 | WP_038242736.1 | hypothetical protein ; Integrase | Integrase |
| QMA0440_RS07560 () | 1633219..1634364 | - | 1146 | WP_038242735.1 | YRC family class C beta-lactamase | - |
| QMA0440_RS07565 () | 1635105..1635791 | - | 687 | WP_038242734.1 | hypothetical protein | - |
| QMA0440_RS07570 () | 1635998..1636627 | - | 630 | WP_004721714.1 | hypothetical protein | - |
| QMA0440_RS07575 () | 1637810..1638217 | + | 408 | WP_051847005.1 | hypothetical protein | - |
| QMA0440_RS07580 () | 1638757..1638936 | - | 180 | WP_038242732.1 | GhoT/OrtT family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|