MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 92642 bp
Accession: NZ_CP017099 Location: 5362518..5455159 Organism: Pseudomonas aeruginosa strain DN1 Replicon: chromosome
Accession: NZ_CP017099 Location: 5362518..5455159 Organism: Pseudomonas aeruginosa strain DN1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG483_RS25710 () | 5358142..5362287 | + | 4146 | WP_023101567.1 | two-partner secretion system exoprotein TpsA4 | - |
| BG483_RS25715 () | 5362668..5363528 | + | 861 | WP_003157048.1 | ParA family protein | - |
| BG483_RS25720 () | 5363530..5364267 | + | 738 | WP_023108754.1 | hypothetical protein | - |
| BG483_RS25725 () | 5364264..5364761 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| BG483_RS25730 () | 5364767..5365219 | + | 453 | Protein_4965 | hypothetical protein | - |
| BG483_RS25735 () | 5365280..5365909 | + | 630 | WP_044060901.1 | hypothetical protein | - |
| BG483_RS25740 () | 5365909..5366610 | + | 702 | WP_023082648.1 | DUF2786 domain-containing protein | - |
| BG483_RS25745 () | 5366607..5367314 | + | 708 | WP_031693900.1 | HNH endonuclease | - |
| BG483_RS25750 () | 5367298..5367516 | + | 219 | WP_003122068.1 | hypothetical protein | - |
| BG483_RS25755 () | 5367513..5368856 | + | 1344 | WP_016852967.1 | replicative DNA helicase | - |
| BG483_RS25760 () | 5368913..5369533 | + | 621 | WP_033179081.1 | hypothetical protein | - |
| BG483_RS25765 () | 5369628..5370215 | + | 588 | WP_023093612.1 | hypothetical protein | - |
| BG483_RS25770 () | 5371346..5371783 | - | 438 | WP_023093613.1 | hypothetical protein | - |
| BG483_RS25775 () | 5372373..5372798 | - | 426 | WP_031693901.1 | hypothetical protein | - |
| BG483_RS25780 () | 5372976..5373161 | + | 186 | WP_031693902.1 | hypothetical protein | - |
| BG483_RS25785 () | 5373151..5373678 | + | 528 | WP_031693903.1 | hypothetical protein | - |
| BG483_RS34305 () | 5373675..5373842 | + | 168 | WP_162977344.1 | hypothetical protein | - |
| BG483_RS33930 () | 5373835..5374329 | + | 495 | WP_124183384.1 | hypothetical protein | - |
| BG483_RS25795 () | 5374322..5374555 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| BG483_RS25800 () | 5374555..5375577 | + | 1023 | WP_031693906.1 | nucleoid-associated protein YejK | - |
| BG483_RS25805 () | 5375574..5376464 | + | 891 | WP_003157039.1 | DNA adenine methylase | - |
| BG483_RS25810 () | 5376485..5376754 | + | 270 | WP_003157038.1 | Arc family DNA-binding protein | - |
| BG483_RS25815 () | 5376751..5378484 | + | 1734 | WP_031693907.1 | ParB family protein | - |
| BG483_RS25820 () | 5378512..5379267 | + | 756 | WP_031693908.1 | DUF2857 domain-containing protein | - |
| BG483_RS25825 () | 5379270..5380595 | + | 1326 | WP_069382851.1 | hypothetical protein | - |
| BG483_RS25835 () | 5381397..5381594 | + | 198 | WP_003105756.1 | hypothetical protein | - |
| BG483_RS25840 () | 5381751..5382479 | + | 729 | WP_003448749.1 | TIGR03761 family integrating conjugative element protein | - |
| BG483_RS25845 () | 5382485..5383033 | + | 549 | WP_069382829.1 | DUF3158 family protein | - |
| BG483_RS25850 () | 5383081..5383911 | + | 831 | WP_003120975.1 | Rha family transcriptional regulator | - |
| BG483_RS25855 () | 5383941..5384429 | + | 489 | WP_031693911.1 | single-stranded DNA-binding protein | - |
| BG483_RS25860 () | 5384537..5384890 | + | 354 | WP_003120979.1 | helix-turn-helix domain-containing protein | - |
| BG483_RS34310 () | 5384841..5385164 | + | 324 | WP_170869300.1 | CrpP family protein | - |
| BG483_RS25870 () | 5385280..5387199 | + | 1920 | WP_031693912.1 | type I DNA topoisomerase | - |
| BG483_RS25875 () | 5387208..5387960 | + | 753 | WP_031693913.1 | hypothetical protein | - |
| BG483_RS25885 () | 5388261..5390150 | + | 1890 | WP_023101908.1 | hypothetical protein | - |
| BG483_RS25890 () | 5390147..5392123 | + | 1977 | WP_031693914.1 | DEAD/DEAH box helicase | - |
| BG483_RS25895 () | 5392264..5392608 | + | 345 | WP_016851612.1 | hypothetical protein | - |
| BG483_RS25900 () | 5392679..5392969 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| BG483_RS25905 () | 5392966..5393265 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BG483_RS25910 () | 5393467..5394591 | + | 1125 | WP_012076859.1 | hypothetical protein | VF |
| BG483_RS25915 () | 5394591..5396300 | + | 1710 | WP_012076860.1 | hypothetical protein | VF |
| BG483_RS25920 () | 5396304..5397629 | + | 1326 | WP_058343417.1 | type 4b pilus protein PilO2 | - |
| BG483_RS25925 () | 5397619..5398152 | + | 534 | WP_023875934.1 | type IV pilus biogenesis protein PilP | - |
| BG483_RS25930 () | 5398161..5399741 | + | 1581 | WP_033864491.1 | hypothetical protein | VF |
| BG483_RS25935 () | 5399741..5400820 | + | 1080 | WP_058343418.1 | hypothetical protein | VF |
| BG483_RS25940 () | 5400842..5401372 | + | 531 | WP_023093674.1 | hypothetical protein | VF |
| BG483_RS25945 () | 5401369..5402325 | + | 957 | WP_003117051.1 | hypothetical protein | VF |
| BG483_RS25950 () | 5402318..5403697 | + | 1380 | WP_034081814.1 | hypothetical protein | VF |
| BG483_RS25955 () | 5403715..5404152 | + | 438 | WP_003120998.1 | hypothetical protein | VF |
| BG483_RS25965 () | 5405157..5406155 | + | 999 | WP_022579633.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| BG483_RS25975 () | 5406465..5407031 | + | 567 | WP_023110988.1 | hypothetical protein | - |
| BG483_RS34315 () | 5407108..5407284 | + | 177 | WP_003149538.1 | hypothetical protein | - |
| BG483_RS25980 () | 5407746..5408234 | + | 489 | WP_023875942.1 | DUF3577 domain-containing protein | - |
| BG483_RS34320 () | 5408372..5408530 | + | 159 | WP_023875943.1 | hypothetical protein | - |
| BG483_RS25985 () | 5408604..5408801 | + | 198 | WP_009315817.1 | hypothetical protein | - |
| BG483_RS25995 () | 5409286..5409993 | + | 708 | WP_023102687.1 | hypothetical protein | - |
| BG483_RS26000 () | 5410229..5410579 | + | 351 | WP_004347949.1 | hypothetical protein | - |
| BG483_RS26005 () | 5410636..5411427 | + | 792 | WP_031693918.1 | DUF3275 family protein | - |
| BG483_RS26010 () | 5411530..5411892 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| BG483_RS26015 () | 5411960..5412214 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| BG483_RS26020 () | 5412307..5412615 | + | 309 | Protein_5021 | hypothetical protein | - |
| BG483_RS33750 () | 5412813..5413289 | - | 477 | Protein_5022 | IS3 family transposase ISPa32 | Transposase |
| BG483_RS26030 () | 5413362..5413885 | + | 524 | Protein_5023 | IS5 family transposase ISPs1 | Transposase |
| BG483_RS26035 () | 5413919..5415019 | - | 1101 | WP_023102692.1 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
| BG483_RS26040 () | 5415003..5416244 | - | 1242 | WP_023102693.1 | MFS transporter | - |
| BG483_RS26045 () | 5416241..5417602 | - | 1362 | WP_073937414.1 | glycoside hydrolase family 65 protein | - |
| BG483_RS26050 () | 5418499..5419545 | - | 1047 | WP_023102695.1 | GDP-L-fucose synthase | VF |
| BG483_RS33935 () | 5419538..5420212 | - | 675 | WP_023102696.1 | hypothetical protein | - |
| BG483_RS26060 () | 5420224..5420706 | - | 483 | WP_078451656.1 | adenylyltransferase/cytidyltransferase family protein | - |
| BG483_RS26065 () | 5420714..5421217 | - | 504 | WP_073937386.1 | GNAT family N-acetyltransferase | - |
| BG483_RS26070 () | 5421207..5422607 | - | 1401 | WP_078451657.1 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
| BG483_RS26075 () | 5422997..5423548 | + | 552 | Protein_5032 | IS5 family transposase IS2000 | Transposase |
| BG483_RS26090 () | 5424968..5425660 | + | 693 | WP_023102701.1 | hypothetical protein | - |
| BG483_RS26095 () | 5425670..5426422 | + | 753 | WP_023102702.1 | TIGR03759 family integrating conjugative element protein | - |
| BG483_RS26100 () | 5426407..5426988 | + | 582 | WP_023102703.1 | hypothetical protein | VF |
| BG483_RS26105 () | 5426985..5427485 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| BG483_RS26110 () | 5427494..5427763 | + | 270 | WP_034081434.1 | hypothetical protein | - |
| BG483_RS26115 () | 5427767..5429998 | + | 2232 | WP_069382830.1 | type IV conjugative transfer system coupling protein TraD | - |
| BG483_RS26120 () | 5429998..5430744 | + | 747 | WP_069382831.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| BG483_RS26125 () | 5430762..5431253 | + | 492 | WP_069382832.1 | hypothetical protein | - |
| BG483_RS26130 () | 5431494..5432975 | + | 1482 | WP_022579644.1 | UvrD-helicase domain-containing protein | - |
| BG483_RS26135 () | 5433083..5433388 | + | 306 | WP_022579645.1 | hypothetical protein | - |
| BG483_RS26140 () | 5433481..5433819 | + | 339 | WP_033989538.1 | RAQPRD family integrative conjugative element protein | - |
| BG483_RS26145 () | 5433816..5434055 | + | 240 | WP_069382833.1 | TIGR03758 family integrating conjugative element protein | - |
| BG483_RS26150 () | 5434073..5434429 | + | 357 | WP_003109398.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| BG483_RS26155 () | 5434440..5434826 | + | 387 | WP_009316296.1 | TIGR03750 family conjugal transfer protein | - |
| BG483_RS26160 () | 5434823..5435482 | + | 660 | WP_015648292.1 | TIGR03746 family integrating conjugative element protein | - |
| BG483_RS26165 () | 5435479..5436363 | + | 885 | WP_033948693.1 | TIGR03749 family integrating conjugative element protein | - |
| BG483_RS26170 () | 5436347..5437852 | + | 1506 | WP_043502676.1 | TIGR03752 family integrating conjugative element protein | - |
| BG483_RS26175 () | 5437830..5438273 | + | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| BG483_RS26180 () | 5438273..5441215 | + | 2943 | WP_031299041.1 | conjugative transfer ATPase | - |
| BG483_RS26185 () | 5441212..5441496 | + | 285 | WP_003099860.1 | hypothetical protein | - |
| BG483_RS26190 () | 5441493..5442152 | + | 660 | WP_003109405.1 | DsbA family protein | - |
| BG483_RS26195 () | 5442149..5442367 | - | 219 | WP_003109406.1 | hypothetical protein | - |
| BG483_RS26210 () | 5444509..5444940 | + | 432 | WP_003111736.1 | TIGR03757 family integrating conjugative element protein | - |
| BG483_RS26215 () | 5444940..5445878 | + | 939 | WP_016851627.1 | TIGR03756 family integrating conjugative element protein | - |
| BG483_RS26220 () | 5445896..5447287 | + | 1392 | WP_034005321.1 | integrating conjugative element protein | - |
| BG483_RS26225 () | 5447287..5447652 | + | 366 | WP_003156419.1 | hypothetical protein | - |
| BG483_RS26230 () | 5447649..5449181 | + | 1533 | WP_034005323.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| BG483_RS26235 () | 5449216..5449569 | - | 354 | WP_069382834.1 | hypothetical protein | - |
| BG483_RS26245 () | 5449894..5450808 | - | 915 | WP_034005325.1 | hypothetical protein | - |
| BG483_RS26250 () | 5450834..5451073 | - | 240 | WP_034005327.1 | hypothetical protein | - |
| BG483_RS26255 () | 5451516..5453405 | + | 1890 | WP_034005329.1 | helicase/relaxase domain-containing protein | - |
| BG483_RS26260 () | 5453402..5454742 | + | 1341 | WP_003150279.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| BG483_RS26280 () | 5455597..5458161 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| BG483_RS26285 () | 5458317..5459045 | - | 729 | WP_015503650.1 | peptidoglycan editing factor PgeF | - |
| BG483_RS26290 () | 5459042..5460004 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|