MGE detailed information
MGE type: Prophage MGE length: 33658 bp
Accession: NZ_CP017099 Location: 5237533..5271190 Organism: Pseudomonas aeruginosa strain DN1 Replicon: chromosome
Accession: NZ_CP017099 Location: 5237533..5271190 Organism: Pseudomonas aeruginosa strain DN1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG483_RS25070 () | 5232899..5233696 | - | 798 | WP_003094341.1 | lipid asymmetry maintenance ABC transporter permease subunit MlaE | - |
| BG483_RS25075 () | 5233696..5234505 | - | 810 | WP_003094343.1 | ABC transporter ATP-binding protein | - |
| BG483_RS25080 () | 5234919..5235899 | + | 981 | WP_003094347.1 | arabinose-5-phosphate isomerase KdsD | - |
| BG483_RS25085 () | 5235899..5236438 | + | 540 | WP_003094350.1 | HAD family hydrolase | - |
| BG483_RS25090 () | 5236447..5237019 | + | 573 | WP_003094353.1 | LPS export ABC transporter periplasmic protein LptC | - |
| BG483_RS25095 () | 5237006..5237533 | + | 528 | WP_003120916.1 | lipopolysaccharide transport periplasmic protein LptA | - |
| BG483_RS25100 () | 5237533..5238258 | + | 726 | WP_003094355.1 | LPS export ABC transporter ATP-binding protein | - |
| BG483_RS25105 () | 5238484..5239977 | + | 1494 | WP_003094357.1 | RNA polymerase factor sigma-54 | - |
| BG483_RS25110 () | 5240055..5240363 | + | 309 | WP_003094359.1 | ribosome-associated translation inhibitor RaiA | - |
| BG483_RS25115 () | 5240377..5240841 | + | 465 | WP_003098853.1 | PTS IIA-like nitrogen regulatory protein PtsN | - |
| BG483_RS25120 () | 5240843..5241703 | + | 861 | WP_003094361.1 | RNase adapter RapZ | - |
| BG483_RS25125 () | 5241733..5242005 | + | 273 | WP_003094362.1 | HPr family phosphocarrier protein | - |
| BG483_RS25130 () | 5242036..5243151 | - | 1116 | WP_012077216.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| BG483_RS25135 () | 5243156..5243392 | - | 237 | WP_012077217.1 | helix-turn-helix domain-containing protein | - |
| BG483_RS25140 () | 5243487..5243717 | + | 231 | WP_012077218.1 | hypothetical protein | - |
| BG483_RS25145 () | 5243728..5246421 | + | 2694 | WP_012077219.1 | toprim domain-containing protein | - |
| BG483_RS25150 () | 5246852..5247052 | + | 201 | WP_012074157.1 | hypothetical protein | - |
| BG483_RS25155 () | 5247024..5247425 | + | 402 | WP_012077220.1 | hypothetical protein | - |
| BG483_RS25160 () | 5247441..5247797 | + | 357 | WP_012074155.1 | hypothetical protein | - |
| BG483_RS34295 () | 5247865..5248278 | + | 414 | WP_025297579.1 | hypothetical protein | - |
| BG483_RS25170 () | 5248265..5248480 | + | 216 | WP_012074154.1 | hypothetical protein | - |
| BG483_RS25175 () | 5248477..5248707 | + | 231 | WP_012074153.1 | hypothetical protein | - |
| BG483_RS25180 () | 5248704..5248985 | + | 282 | WP_012074152.1 | hypothetical protein | - |
| BG483_RS25190 () | 5249529..5249789 | - | 261 | WP_023122741.1 | ogr/Delta-like zinc finger family protein | - |
| BG483_RS25195 () | 5249835..5250689 | - | 855 | WP_025297580.1 | phage portal protein | - |
| BG483_RS25200 () | 5250601..5252649 | - | 2049 | WP_025297581.1 | terminase family protein | - |
| BG483_RS25205 () | 5252807..5253760 | + | 954 | WP_025297582.1 | GPO family capsid scaffolding protein | - |
| BG483_RS25210 () | 5253760..5254782 | + | 1023 | WP_012074147.1 | phage major capsid protein, P2 family | - |
| BG483_RS25215 () | 5254779..5255516 | + | 738 | WP_025297583.1 | terminase | - |
| BG483_RS25220 () | 5255614..5256075 | + | 462 | WP_012074145.1 | head completion/stabilization protein | - |
| BG483_RS25225 () | 5256077..5256514 | + | 438 | WP_012074144.1 | phage tail protein | - |
| BG483_RS25230 () | 5256507..5257172 | + | 666 | WP_012074143.1 | virion morphogenesis protein | - |
| BG483_RS25235 () | 5257184..5258299 | + | 1116 | WP_012074142.1 | DUF2586 family protein | - |
| BG483_RS25240 () | 5258321..5258752 | + | 432 | WP_029771257.1 | DUF2597 family protein | - |
| BG483_RS25245 () | 5258752..5258961 | + | 210 | WP_012074140.1 | TraR/DksA family transcriptional regulator | - |
| BG483_RS25250 () | 5258961..5259266 | + | 306 | WP_025297585.1 | hypothetical protein | - |
| BG483_RS25255 () | 5259263..5259724 | + | 462 | WP_012074138.1 | lysozyme | - |
| BG483_RS25260 () | 5259721..5260206 | + | 486 | WP_012074137.1 | lysis system i-spanin subunit Rz | - |
| BG483_RS25265 () | 5260203..5260490 | + | 288 | WP_012074136.1 | hypothetical protein | - |
| BG483_RS34300 () | 5260514..5260654 | + | 141 | WP_012074135.1 | hypothetical protein | - |
| BG483_RS25270 () | 5260669..5262723 | + | 2055 | WP_012074134.1 | phage tail tape measure protein | - |
| BG483_RS25275 () | 5262720..5263040 | + | 321 | WP_012074133.1 | DUF2590 family protein | - |
| BG483_RS25280 () | 5263037..5264209 | + | 1173 | WP_012074132.1 | baseplate J/gp47 family protein | - |
| BG483_RS25285 () | 5264202..5264726 | + | 525 | WP_012074131.1 | phage tail protein | - |
| BG483_RS25290 () | 5264738..5266702 | + | 1965 | WP_025297588.1 | phage tail protein | - |
| BG483_RS25295 () | 5266716..5267426 | + | 711 | WP_012074129.1 | hypothetical protein | - |
| BG483_RS25300 () | 5267423..5268343 | + | 921 | WP_012074128.1 | hypothetical protein | - |
| BG483_RS25305 () | 5268340..5268879 | + | 540 | WP_012074127.1 | hypothetical protein | - |
| BG483_RS25310 () | 5268879..5269577 | + | 699 | WP_033896049.1 | hypothetical protein | - |
| BG483_RS25315 () | 5269562..5270533 | + | 972 | WP_012077228.1 | hypothetical protein | - |
| BG483_RS25320 () | 5270576..5270980 | - | 405 | WP_012077229.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| BG483_RS25325 () | 5271008..5271190 | - | 183 | WP_071534354.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| BG483_RS25330 () | 5271733..5272665 | - | 933 | WP_003120918.1 | ZIP family metal transporter | - |
| BG483_RS25335 () | 5272684..5273295 | - | 612 | WP_003098862.1 | superoxide dismutase | - |
| BG483_RS25340 () | 5273308..5273757 | - | 450 | WP_003094369.1 | hypothetical protein | - |
| BG483_RS25345 () | 5273785..5275161 | - | 1377 | WP_023101553.1 | class II fumarate hydratase | - |
| BG483_RS25350 () | 5275154..5275549 | - | 396 | WP_003094374.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|