MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 43945 bp
Accession: NZ_CP017022 Location: 1..43945 Organism: Xanthomonas citri pv. malvacearum strain MSCT Replicon: plasmid pMSCT44kb
Accession: NZ_CP017022 Location: 1..43945 Organism: Xanthomonas citri pv. malvacearum strain MSCT Replicon: plasmid pMSCT44kb
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BGK55_RS21600 () | 1269..1754 | - | 486 | Protein_1 | IS3 family transposase IS1389-B | Transposase |
| BGK55_RS21605 () | 1794..2880 | - | 1087 | Protein_2 | IS3 family transposase ISXac2 | Transposase |
| BGK55_RS21615 () | 3160..4281 | + | 1122 | WP_011347382.1 | type III secretion system YopJ family effector XopJ | - |
| BGK55_RS23815 () | 5985..6326 | - | 342 | Protein_5 | recombinase family protein | - |
| BGK55_RS21635 () | 6370..7068 | - | 699 | WP_005918428.1 | UPF0149 family protein | - |
| BGK55_RS21640 () | 7087..10062 | - | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| BGK55_RS21645 () | 10067..10486 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| BGK55_RS21650 () | 10486..10725 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| BGK55_RS21655 () | 10940..11863 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| BGK55_RS23825 () | 12464..12769 | + | 306 | WP_178383298.1 | hypothetical protein | - |
| BGK55_RS23830 () | 12924..13928 | - | 1005 | WP_005918486.1 | Abi family protein | - |
| BGK55_RS21660 () | 14143..14793 | - | 651 | WP_005918483.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| BGK55_RS21665 () | 15112..19626 | - | 4515 | WP_069288204.1 | TAL effector repeat-containing protein | - |
| BGK55_RS23840 () | 19906..20850 | - | 945 | Protein_15 | TAL effector repeat-containing protein | - |
| BGK55_RS21675 () | 21167..22414 | - | 1248 | WP_005918211.1 | replication initiation protein | - |
| BGK55_RS21680 () | 22662..22976 | - | 315 | WP_005918227.1 | hypothetical protein | - |
| BGK55_RS21685 () | 23121..23444 | - | 324 | WP_005918229.1 | hypothetical protein | - |
| BGK55_RS21690 () | 23441..24067 | - | 627 | WP_005918230.1 | Chromosome-partitioning ATPase Soj | VF |
| BGK55_RS25310 () | 24236..24373 | + | 138 | WP_005918231.1 | hypothetical protein | - |
| BGK55_RS21695 () | 24786..25163 | - | 378 | Protein_21 | hypothetical protein | - |
| BGK55_RS21710 () | 26402..26665 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| BGK55_RS21715 () | 26690..27091 | - | 402 | WP_005917849.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BGK55_RS21720 () | 27088..27348 | - | 261 | WP_005917852.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| BGK55_RS23855 () | 27533..27754 | + | 222 | WP_005917854.1 | antitoxin MazE family protein | Antitoxin Detail |
| BGK55_RS21725 () | 27751..28074 | + | 324 | WP_005917856.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| BGK55_RS21730 () | 28100..28387 | + | 288 | WP_029220894.1 | hypothetical protein | - |
| BGK55_RS21735 () | 28394..29581 | + | 1188 | WP_005917859.1 | zeta toxin family protein | - |
| BGK55_RS21740 () | 29767..30051 | - | 285 | WP_003490829.1 | hypothetical protein | - |
| BGK55_RS21745 () | 30341..33325 | - | 2985 | WP_005917862.1 | Multifunctional conjugation protein TraI | Relaxase |
| BGK55_RS21750 () | 33339..34913 | - | 1575 | WP_005917865.1 | type IV secretion system DNA-binding domain-containing protein | - |
| BGK55_RS25460 () | 35054..35395 | - | 342 | WP_078566025.1 | hypothetical protein | - |
| BGK55_RS21760 () | 35594..36214 | - | 621 | WP_033837730.1 | hypothetical protein | - |
| BGK55_RS21765 () | 36431..40333 | + | 3903 | WP_069288206.1 | TAL effector repeat-containing protein | - |
| BGK55_RS21780 () | 41973..43250 | + | 1278 | WP_069288207.1 | lytic murein transglycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|