MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 55944 bp
Accession: NZ_CP017011 Location: 1..55944 Organism: Pseudomonas syringae pv. actinidiae strain NZ-47 Replicon: plasmid pPsa22180b
Accession: NZ_CP017011 Location: 1..55944 Organism: Pseudomonas syringae pv. actinidiae strain NZ-47 Replicon: plasmid pPsa22180b
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PsaNZ47_RS32045 () | 2269..3822 | - | 1554 | WP_074321341.1 | type IV secretion system DNA-binding domain-containing protein | - |
| PsaNZ47_RS32050 () | 3823..4209 | - | 387 | WP_074321342.1 | hypothetical protein | - |
| PsaNZ47_RS32055 () | 4640..5095 | + | 456 | WP_074321343.1 | hypothetical protein | - |
| PsaNZ47_RS32060 () | 5092..5817 | + | 726 | WP_074321344.1 | plasmid stabilization protein | - |
| PsaNZ47_RS32065 () | 5826..6221 | + | 396 | WP_074321345.1 | hypothetical protein | - |
| PsaNZ47_RS32070 () | 6343..7140 | + | 798 | WP_074321346.1 | SprT-like domain-containing protein | - |
| PsaNZ47_RS34615 () | 7813..8163 | - | 351 | WP_074321347.1 | hypothetical protein | - |
| PsaNZ47_RS34620 () | 9358..9534 | - | 177 | WP_155296573.1 | hypothetical protein | - |
| PsaNZ47_RS32090 () | 9899..10264 | - | 366 | WP_074322273.1 | hypothetical protein | - |
| PsaNZ47_RS32095 () | 10355..10807 | - | 453 | WP_074321593.1 | hypothetical protein | - |
| PsaNZ47_RS32100 () | 10953..11264 | - | 312 | WP_074321591.1 | hypothetical protein | - |
| PsaNZ47_RS32105 () | 11348..11779 | - | 432 | WP_074321589.1 | hypothetical protein | - |
| PsaNZ47_RS32110 () | 12715..13011 | - | 297 | WP_074321550.1 | hypothetical protein | - |
| PsaNZ47_RS32115 () | 13146..13583 | - | 438 | WP_074321552.1 | hypothetical protein | - |
| PsaNZ47_RS32120 () | 13641..14477 | - | 837 | WP_074321554.1 | DUF945 domain-containing protein | - |
| PsaNZ47_RS32125 () | 14666..15103 | - | 438 | WP_139301616.1 | hypothetical protein | - |
| PsaNZ47_RS32130 () | 15222..15524 | + | 303 | WP_074321559.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PsaNZ47_RS32135 () | 15521..15814 | + | 294 | WP_074321561.1 | putative addiction module antidote protein | Antitoxin Detail |
| PsaNZ47_RS32145 () | 16826..17131 | - | 306 | WP_074321288.1 | hypothetical protein | - |
| PsaNZ47_RS32155 () | 17612..17851 | - | 240 | WP_019333459.1 | hypothetical protein | - |
| PsaNZ47_RS32160 () | 18160..18339 | - | 180 | Protein_21 | hypothetical protein | - |
| PsaNZ47_RS32165 () | 18405..18692 | - | 288 | WP_074321290.1 | hypothetical protein | - |
| PsaNZ47_RS32175 () | 18962..19168 | - | 207 | WP_074321348.1 | hypothetical protein | - |
| PsaNZ47_RS32180 () | 19336..19626 | - | 291 | WP_074321292.1 | hypothetical protein | - |
| PsaNZ47_RS32185 () | 19623..20057 | - | 435 | WP_074321293.1 | hypothetical protein | - |
| PsaNZ47_RS32190 () | 20314..20523 | - | 210 | WP_074321294.1 | hypothetical protein | - |
| PsaNZ47_RS32205 () | 21104..21514 | - | 411 | WP_074321297.1 | hypothetical protein | - |
| PsaNZ47_RS32210 () | 21511..21954 | - | 444 | WP_074321298.1 | hypothetical protein | - |
| PsaNZ47_RS32215 () | 21947..22204 | - | 258 | WP_074321299.1 | hypothetical protein | - |
| PsaNZ47_RS32220 () | 22268..22705 | - | 438 | WP_074321300.1 | hypothetical protein | - |
| PsaNZ47_RS32225 () | 22749..24422 | - | 1674 | WP_074321349.1 | DNA cytosine methyltransferase | - |
| PsaNZ47_RS34625 () | 24603..25115 | - | 513 | WP_139301603.1 | hypothetical protein | - |
| PsaNZ47_RS32235 () | 25178..25387 | - | 210 | WP_074321302.1 | hypothetical protein | - |
| PsaNZ47_RS32240 () | 25575..25775 | - | 201 | WP_074321303.1 | hypothetical protein | - |
| PsaNZ47_RS32245 () | 25772..26092 | - | 321 | WP_074321304.1 | hypothetical protein | - |
| PsaNZ47_RS32250 () | 26092..26517 | - | 426 | WP_139301604.1 | hypothetical protein | - |
| PsaNZ47_RS32255 () | 27077..27505 | + | 429 | WP_074321306.1 | UV resistance protein | - |
| PsaNZ47_RS32260 () | 27495..28781 | + | 1287 | WP_074321307.1 | Y-family DNA polymerase | - |
| PsaNZ47_RS32265 () | 28805..29119 | - | 315 | WP_074321308.1 | hypothetical protein | - |
| PsaNZ47_RS32270 () | 29135..29521 | - | 387 | WP_074321309.1 | hypothetical protein | - |
| PsaNZ47_RS32275 () | 29581..30018 | - | 438 | WP_074321310.1 | hypothetical protein | - |
| PsaNZ47_RS32295 () | 31937..32641 | - | 705 | WP_074321314.1 | replication initiation protein | - |
| PsaNZ47_RS32300 () | 33149..34417 | - | 1269 | WP_074321315.1 | DUF1173 family protein | - |
| PsaNZ47_RS32305 () | 34428..35183 | - | 756 | WP_074321316.1 | hypothetical protein | - |
| PsaNZ47_RS32310 () | 35205..35819 | - | 615 | WP_074321317.1 | Tn3 family transposase TnBth3 | Transposase |
| PsaNZ47_RS32315 () | 35964..36182 | - | 219 | WP_074321318.1 | hypothetical protein | - |
| PsaNZ47_RS32320 () | 36220..36582 | - | 363 | WP_074321319.1 | hypothetical protein | - |
| PsaNZ47_RS32325 () | 36579..36893 | - | 315 | WP_074321320.1 | hypothetical protein | - |
| PsaNZ47_RS32330 () | 36928..37275 | - | 348 | WP_074321321.1 | hypothetical protein | - |
| PsaNZ47_RS32335 () | 37316..38107 | - | 792 | WP_080495396.1 | hypothetical protein | - |
| PsaNZ47_RS32340 () | 38122..38541 | - | 420 | WP_074321351.1 | hypothetical protein | - |
| PsaNZ47_RS32345 () | 39100..39381 | - | 282 | WP_074321322.1 | hypothetical protein | - |
| PsaNZ47_RS32350 () | 39374..39742 | - | 369 | WP_074321323.1 | ParR | - |
| PsaNZ47_RS32355 () | 39739..40686 | - | 948 | WP_074321324.1 | ParB/RepB/Spo0J family partition protein | - |
| PsaNZ47_RS32360 () | 40697..41464 | - | 768 | WP_074321325.1 | ParA family protein | - |
| PsaNZ47_RS32365 () | 42363..42635 | + | 273 | WP_074321326.1 | hypothetical protein | - |
| PsaNZ47_RS32370 () | 42652..43113 | + | 462 | WP_074321327.1 | TrbC/VirB2 family protein | - |
| PsaNZ47_RS32375 () | 43117..43410 | + | 294 | WP_074321328.1 | VirB3 family type IV secretion system protein | - |
| PsaNZ47_RS32380 () | 43445..46087 | + | 2643 | WP_074321352.1 | type VI secretion protein | - |
| PsaNZ47_RS32385 () | 46096..46776 | + | 681 | WP_074321353.1 | type IV secretion system protein | - |
| PsaNZ47_RS32390 () | 46806..47018 | + | 213 | WP_074321329.1 | hypothetical protein | - |
| PsaNZ47_RS32395 () | 47011..47397 | + | 387 | WP_074321330.1 | hypothetical protein | - |
| PsaNZ47_RS32400 () | 47385..48248 | + | 864 | WP_074321331.1 | type IV secretion system protein | - |
| PsaNZ47_RS32405 () | 48248..48910 | + | 663 | WP_074321332.1 | type IV secretion system protein | - |
| PsaNZ47_RS32410 () | 48939..49721 | + | 783 | WP_074321333.1 | Type IV secretion system protein virB9 | VF |
| PsaNZ47_RS32415 () | 50165..51001 | + | 837 | WP_170870132.1 | Type IV secretion system protein PtlG | VF |
| PsaNZ47_RS32420 () | 51011..52039 | + | 1029 | WP_074321335.1 | Type IV secretion system protein VirB11 | VF |
| PsaNZ47_RS32425 () | 52023..53018 | + | 996 | WP_074321336.1 | Type IV secretion system protein virB1 | VF |
| PsaNZ47_RS32430 () | 53048..53377 | + | 330 | WP_074321337.1 | hypothetical protein | - |
| PsaNZ47_RS32435 () | 53427..53966 | + | 540 | WP_074321354.1 | Phospholipase D | VF |
| PsaNZ47_RS32440 () | 53983..54582 | + | 600 | WP_080495397.1 | hypothetical protein | - |
| PsaNZ47_RS32445 () | 54666..55097 | - | 432 | WP_074321339.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|