MGE detailed information
MGE type: Prophage MGE length: 27209 bp
Accession: NZ_CP017007 Location: 5249257..5276465 Organism: Pseudomonas syringae pv. actinidiae strain ICMP 20586 Replicon: chromosome
Accession: NZ_CP017007 Location: 5249257..5276465 Organism: Pseudomonas syringae pv. actinidiae strain ICMP 20586 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PsaNZ45_RS25480 () | 5244433..5244996 | + | 564 | WP_017684735.1 | tyrosine-type recombinase/integrase | - |
| PsaNZ45_RS25495 () | 5245679..5246122 | + | 444 | WP_017684732.1 | transcriptional regulator | - |
| PsaNZ45_RS34660 () | 5246272..5246487 | + | 216 | WP_020360176.1 | hypothetical protein | - |
| PsaNZ45_RS25505 () | 5246706..5249135 | - | 2430 | Protein_4647 | TonB-dependent siderophore receptor | - |
| PsaNZ45_RS25510 () | 5249257..5250195 | - | 939 | WP_017684729.1 | FecR domain-containing protein | - |
| PsaNZ45_RS25515 () | 5250199..5250708 | - | 510 | WP_003382231.1 | hypothetical protein | VF |
| PsaNZ45_RS25520 () | 5251058..5252677 | - | 1620 | WP_017684728.1 | hypothetical protein | VF |
| PsaNZ45_RS25525 () | 5252970..5253104 | + | 135 | Protein_4651 | aldo/keto reductase | - |
| PsaNZ45_RS25530 () | 5253134..5254201 | - | 1068 | WP_074556939.1 | IS630 family transposase ISPsy32 | Transposase |
| PsaNZ45_RS25535 () | 5254280..5255131 | + | 852 | Protein_4653 | aldo/keto reductase | - |
| PsaNZ45_RS25540 () | 5255128..5255718 | + | 591 | WP_017685061.1 | flavodoxin | - |
| PsaNZ45_RS25545 () | 5255743..5256735 | + | 993 | WP_017685060.1 | aldo/keto reductase | - |
| PsaNZ45_RS25550 () | 5256795..5257262 | + | 468 | WP_020304130.1 | cupin domain-containing protein | - |
| PsaNZ45_RS25560 () | 5257531..5258708 | + | 1178 | WP_164706461.1 | IS3 family transposase ISPsy28 | Transposase |
| PsaNZ45_RS25565 () | 5258865..5259695 | + | 831 | WP_017684104.1 | hypothetical protein | - |
| PsaNZ45_RS25570 () | 5259721..5261076 | - | 1356 | WP_074556941.1 | hypothetical protein ; Integrase | Integrase |
| PsaNZ45_RS25575 () | 5261317..5262384 | + | 1068 | WP_032685463.1 | IS630 family transposase ISPsy32 | Transposase |
| PsaNZ45_RS25585 () | 5263058..5264068 | - | 1011 | WP_024533178.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PsaNZ45_RS25590 () | 5264196..5264971 | + | 776 | Protein_4662 | carboxymuconolactone decarboxylase family protein | - |
| PsaNZ45_RS25595 () | 5265096..5266040 | + | 945 | WP_017683362.1 | alpha/beta fold hydrolase | - |
| PsaNZ45_RS25600 () | 5266090..5267145 | + | 1056 | WP_017683361.1 | alpha/beta hydrolase | - |
| PsaNZ45_RS25605 () | 5267227..5268120 | + | 894 | WP_003382245.1 | HTH-type transcriptional regulator ArgP | VF |
| PsaNZ45_RS25610 () | 5268364..5268627 | + | 264 | WP_017683360.1 | hypothetical protein | - |
| PsaNZ45_RS25615 () | 5268755..5270635 | - | 1881 | WP_003382247.1 | hypothetical protein | VF |
| PsaNZ45_RS25620 () | 5270994..5272916 | + | 1923 | WP_017683359.1 | hypothetical protein | VF |
| PsaNZ45_RS25625 () | 5273081..5273347 | + | 267 | WP_003382249.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| PsaNZ45_RS25630 () | 5273347..5273622 | + | 276 | WP_017683357.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PsaNZ45_RS25640 () | 5274194..5275462 | + | 1269 | WP_007244158.1 | OprD family porin | - |
| PsaNZ45_RS25645 () | 5275641..5276465 | + | 825 | WP_003380380.1 | NAD(P)-dependent oxidoreductase | - |
| PsaNZ45_RS25650 () | 5276525..5277409 | + | 885 | WP_003380378.1 | SMP-30/gluconolactonase/LRE family protein | - |
| PsaNZ45_RS25655 () | 5277466..5278505 | + | 1040 | Protein_4674 | TRAP transporter substrate-binding protein | - |
| PsaNZ45_RS25660 () | 5278569..5279096 | + | 528 | WP_003380373.1 | TRAP transporter small permease | - |
| PsaNZ45_RS25665 () | 5279097..5280377 | + | 1281 | WP_003380372.1 | TRAP transporter large permease | - |
| PsaNZ45_RS25670 () | 5280461..5281431 | + | 971 | Protein_4677 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|