MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 73029 bp
Accession: NZ_CP016946 Location: 1..73029 Organism: Yersinia enterocolitica strain YE1 Replicon: plasmid unnamed1
Accession: NZ_CP016946 Location: 1..73029 Organism: Yersinia enterocolitica strain YE1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BFS78_RS21565 () | 1224..2144 | + | 921 | WP_010891207.1 | Protein YopD | VF |
| BFS78_RS24285 () | 2369..2875 | + | 507 | Protein_3 | transposase | - |
| BFS78_RS21580 () | 2918..4084 | - | 1167 | WP_013749452.1 | Outer membrane protein YopM | VF |
| BFS78_RS24290 () | 4792..5078 | + | 287 | Protein_5 | DDE-type integrase/transposase/recombinase | - |
| BFS78_RS21590 () | 5374..5511 | + | 138 | WP_002212997.1 | hypothetical protein | - |
| BFS78_RS21595 () | 5686..6775 | - | 1090 | Protein_7 | IS3 family transposase ISYal1 | Transposase |
| BFS78_RS24295 () | 6847..7004 | - | 158 | Protein_8 | DDE-type integrase/transposase/recombinase | - |
| BFS78_RS21600 () | 7410..7802 | - | 393 | WP_010891204.1 | Chaperone protein SycT | VF |
| BFS78_RS21605 () | 7802..8770 | - | 969 | WP_069009717.1 | Cysteine protease YopT | VF |
| BFS78_RS21610 () | 9291..9839 | + | 549 | WP_010891202.1 | hypothetical protein | VF |
| BFS78_RS24300 () | 9998..10284 | + | 287 | Protein_12 | IS3 family transposase | - |
| BFS78_RS21620 () | 10321..11058 | + | 738 | WP_071890449.1 | complement resistance protein TraT | - |
| BFS78_RS21625 () | 11582..12448 | - | 867 | WP_057618955.1 | Effector protein YopJ | VF |
| BFS78_RS21630 () | 12929..15118 | - | 2190 | WP_069009721.1 | Protein kinase YpkA | VF |
| BFS78_RS21635 () | 15126..15575 | - | 450 | WP_050294025.1 | hypothetical protein | VF |
| BFS78_RS24305 () | 15737..15826 | + | 90 | WP_069009728.1 | IS3 family transposase ISEam1 | Transposase |
| BFS78_RS23815 () | 15888..16728 | + | 841 | Protein_18 | IS3 family transposase | - |
| BFS78_RS21655 () | 16928..17716 | - | 789 | Protein_19 | Tn3 family transposase ISPsy39 | Transposase |
| BFS78_RS21660 () | 17716..17967 | - | 252 | Protein_20 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| BFS78_RS21665 () | 17973..18560 | - | 588 | WP_080357947.1 | Adenosine monophosphate-protein transferase SoFic | VF |
| BFS78_RS21670 () | 18697..19242 | + | 546 | WP_050294028.1 | hypothetical protein | - |
| BFS78_RS21675 () | 20232..21110 | - | 879 | WP_162467786.1 | incFII family plasmid replication initiator RepA | - |
| BFS78_RS23460 () | 21091..21165 | - | 75 | WP_071598612.1 | RepA leader peptide Tap | - |
| BFS78_RS21680 () | 21407..21661 | - | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| BFS78_RS21685 () | 21799..22344 | - | 546 | WP_050294029.1 | Phospholipase D | VF |
| BFS78_RS24310 () | 22530..22857 | - | 328 | Protein_27 | DDE-type integrase/transposase/recombinase | - |
| BFS78_RS24315 () | 22942..23079 | + | 138 | Protein_28 | transposase | - |
| BFS78_RS21695 () | 23148..24237 | + | 1090 | Protein_29 | IS3 family transposase ISYal1 | Transposase |
| BFS78_RS21700 () | 24253..24919 | - | 667 | Protein_30 | Multifunctional conjugation protein TraI | Relaxase |
| BFS78_RS21710 () | 25210..25572 | - | 363 | Protein_31 | hypothetical protein | - |
| BFS78_RS21715 () | 25684..26382 | - | 699 | WP_050294038.1 | arsenic resistance NADPH-dependent reductase ArsH | - |
| BFS78_RS21720 () | 26468..26788 | + | 321 | WP_013749489.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| BFS78_RS21725 () | 26834..28123 | + | 1290 | WP_057618950.1 | arsenite efflux transporter membrane subunit ArsB | - |
| BFS78_RS21730 () | 28136..28561 | + | 426 | WP_010891244.1 | glutaredoxin-dependent arsenate reductase | - |
| BFS78_RS21735 () | 28579..29160 | - | 582 | WP_050294040.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| BFS78_RS21740 () | 29321..30172 | + | 852 | WP_050294041.1 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| BFS78_RS21745 () | 30328..30780 | + | 453 | WP_010891241.1 | PprA | - |
| BFS78_RS21750 () | 31102..31977 | - | 876 | WP_013749484.1 | DMT family transporter | - |
| BFS78_RS21755 () | 32047..33465 | - | 1419 | WP_050294042.1 | Adhesin YadA | VF |
| BFS78_RS23830 () | 34063..34624 | + | 562 | Protein_41 | transposase family protein | - |
| BFS78_RS21765 () | 34720..35553 | - | 834 | Protein_42 | Tn3 family transposase TnpA_Tn3 | Transposase |
| BFS78_RS21770 () | 35726..36076 | - | 351 | WP_016266427.1 | Yop proteins translocation protein M | VF |
| BFS78_RS21780 () | 36168..37296 | - | 1129 | Protein_44 | IS3 family transposase ISYal1 | Transposase |
| BFS78_RS21785 () | 37332..38445 | - | 1114 | Protein_45 | IS3 family transposase ISYal1 | Transposase |
| BFS78_RS21790 () | 38758..38976 | + | 219 | WP_013749479.1 | hypothetical protein | - |
| BFS78_RS21795 () | 39037..39507 | - | 471 | WP_010891240.1 | IS481 family transposase ISAzs36 | Transposase |
| BFS78_RS21800 () | 39948..41114 | + | 1167 | WP_010891239.1 | Sporulation initiation inhibitor protein Soj | VF |
| BFS78_RS21805 () | 41111..42076 | + | 966 | WP_050294053.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| BFS78_RS23835 () | 42456..42748 | + | 293 | Protein_50 | IS6 family transposase ISEas1 | Transposase |
| BFS78_RS21810 () | 42914..43156 | + | 243 | WP_005176524.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| BFS78_RS21815 () | 43149..43448 | + | 300 | WP_014609469.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BFS78_RS21820 () | 43589..44248 | - | 660 | WP_072089396.1 | Outer membrane virulence protein YopE | VF |
| BFS78_RS21825 () | 44441..44833 | + | 393 | WP_010891236.1 | YopE regulator | VF |
| BFS78_RS23840 () | 45068..46240 | + | 1173 | Protein_55 | IS3 family transposase | - |
| BFS78_RS21840 () | 46444..46869 | + | 426 | WP_010891235.1 | hypothetical protein | VF |
| BFS78_RS21845 () | 47097..48503 | - | 1407 | WP_069009740.1 | Tyrosine-protein phosphatase YopH | VF |
| BFS78_RS21850 () | 49186..49532 | - | 347 | Protein_58 | Yop proteins translocation protein M | VF |
| BFS78_RS21855 () | 49732..50402 | - | 671 | Protein_59 | Yop proteins translocation protein L | VF |
| BFS78_RS21860 () | 50348..50977 | - | 630 | WP_057618913.1 | Yop proteins translocation protein K | VF |
| BFS78_RS21865 () | 50977..51711 | - | 735 | WP_005176483.1 | Yop proteins translocation lipoprotein J | VF |
| BFS78_RS21870 () | 51711..52064 | - | 354 | WP_084743453.1 | Yop proteins translocation protein I | VF |
| BFS78_RS21875 () | 52065..52562 | - | 498 | WP_005176477.1 | Yop proteins translocation protein H | VF |
| BFS78_RS21880 () | 52559..52906 | - | 348 | WP_014609476.1 | Putative Yop proteins translocation protein G | VF |
| BFS78_RS21885 () | 52908..53171 | - | 264 | WP_014609477.1 | Yop proteins translocation protein F | VF |
| BFS78_RS21890 () | 53168..53371 | - | 204 | WP_050293995.1 | Putative Yop proteins translocation protein E | VF |
| BFS78_RS21895 () | 53368..54624 | - | 1257 | WP_050293996.1 | Yop proteins translocation protein D | VF |
| BFS78_RS21900 () | 54621..56444 | - | 1824 | WP_050293997.1 | Yop proteins translocation protein C | VF |
| BFS78_RS21905 () | 56450..56863 | - | 414 | WP_050293998.1 | Chaperone protein YscB | VF |
| BFS78_RS21910 () | 57089..57187 | - | 99 | WP_010891223.1 | type III secretion system protein YscA | - |
| BFS78_RS21915 () | 57267..58082 | - | 816 | WP_013749464.1 | Virulence regulon transcriptional activator VirF | VF |
| BFS78_RS21920 () | 58206..58600 | - | 395 | Protein_72 | Exoenzyme S synthesis protein B | VF |
| BFS78_RS21925 () | 59176..60240 | - | 1065 | WP_010891221.1 | Yop proteins translocation protein U | VF |
| BFS78_RS21930 () | 60240..61025 | - | 786 | WP_013749462.1 | Surface presentation of antigens protein SpaR | VF |
| BFS78_RS21935 () | 61022..61288 | - | 267 | WP_057618912.1 | hypothetical protein | VF |
| BFS78_RS21940 () | 61290..61942 | - | 653 | Protein_76 | Surface presentation of antigens protein SpaP | VF |
| BFS78_RS21945 () | 61939..62862 | - | 924 | WP_005176825.1 | Yop proteins translocation protein Q | VF |
| BFS78_RS24320 () | 62859..63452 | - | 594 | Protein_78 | hypothetical protein | VF |
| BFS78_RS24325 () | 63627..64511 | - | 885 | Protein_79 | hypothetical protein | VF |
| BFS78_RS21955 () | 64511..64975 | - | 465 | WP_005176819.1 | Yop proteins translocation protein O | VF |
| BFS78_RS21960 () | 64972..66291 | - | 1320 | WP_010891217.1 | putative ATP synthase YscN | VF |
| BFS78_RS21965 () | 66489..67370 | + | 882 | WP_050293999.1 | Outer membrane protein YopN | VF |
| BFS78_RS21970 () | 67351..67629 | + | 279 | WP_002212965.1 | Protein TyeA | VF |
| BFS78_RS21975 () | 67616..67987 | + | 372 | WP_010891215.1 | Chaperone protein SycN | VF |
| BFS78_RS21980 () | 67984..68352 | + | 369 | WP_010891214.1 | Yop proteins translocation protein X | VF |
| BFS78_RS21985 () | 68349..68693 | + | 345 | WP_002229791.1 | Chaperone protein YscY | VF |
| BFS78_RS21990 () | 68680..70794 | + | 2115 | WP_057618910.1 | Invasion protein InvA | VF |
| BFS78_RS21995 () | 70791..71231 | + | 441 | WP_010891212.1 | hypothetical protein | VF |
| BFS78_RS22000 () | 71273..71560 | + | 288 | WP_010891211.1 | hypothetical protein | VF |
| BFS78_RS22005 () | 71562..72542 | + | 981 | WP_069009749.1 | Virulence-associated V antigen | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|