MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 73034 bp
Accession: NZ_CP016939 Location: 1..73034 Organism: Yersinia enterocolitica strain YE5 Replicon: plasmid unnamed1
Accession: NZ_CP016939 Location: 1..73034 Organism: Yersinia enterocolitica strain YE5 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BED32_RS00015 () | 1224..2144 | + | 921 | WP_010891207.1 | Protein YopD | VF |
| BED32_RS23575 () | 2369..2875 | + | 507 | Protein_3 | transposase | - |
| BED32_RS00030 () | 2918..4021 | - | 1104 | WP_010891206.1 | Outer membrane protein YopM | VF |
| BED32_RS23580 () | 4792..5078 | + | 287 | Protein_5 | DDE-type integrase/transposase/recombinase | - |
| BED32_RS00040 () | 5374..5511 | + | 138 | WP_002212997.1 | hypothetical protein | - |
| BED32_RS00045 () | 5686..6775 | - | 1090 | Protein_7 | IS3 family transposase ISYal1 | Transposase |
| BED32_RS23585 () | 6847..7004 | - | 158 | Protein_8 | DDE-type integrase/transposase/recombinase | - |
| BED32_RS00050 () | 7410..7802 | - | 393 | WP_010891204.1 | Chaperone protein SycT | VF |
| BED32_RS00055 () | 7802..8770 | - | 969 | WP_069009717.1 | Cysteine protease YopT | VF |
| BED32_RS00060 () | 9291..9839 | + | 549 | WP_010891202.1 | hypothetical protein | VF |
| BED32_RS23590 () | 9998..10284 | + | 287 | Protein_12 | IS3 family transposase | - |
| BED32_RS00070 () | 10321..11058 | + | 738 | WP_071890449.1 | complement resistance protein TraT | - |
| BED32_RS00075 () | 11582..12448 | - | 867 | WP_057618955.1 | Effector protein YopJ | VF |
| BED32_RS00080 () | 12929..15118 | - | 2190 | WP_069009721.1 | Protein kinase YpkA | VF |
| BED32_RS00085 () | 15126..15575 | - | 450 | WP_050294025.1 | hypothetical protein | VF |
| BED32_RS23595 () | 15737..15826 | + | 90 | WP_069009728.1 | IS3 family transposase ISEam1 | Transposase |
| BED32_RS23270 () | 15888..16728 | + | 841 | Protein_18 | IS3 family transposase | - |
| BED32_RS00105 () | 16928..17716 | - | 789 | Protein_19 | Tn3 family transposase ISPsy39 | Transposase |
| BED32_RS00110 () | 17716..17967 | - | 252 | Protein_20 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| BED32_RS00115 () | 17973..18560 | - | 588 | WP_080357947.1 | Adenosine monophosphate-protein transferase SoFic | VF |
| BED32_RS00120 () | 18697..19242 | + | 546 | WP_050294028.1 | hypothetical protein | - |
| BED32_RS00125 () | 20232..21110 | - | 879 | WP_162467786.1 | incFII family plasmid replication initiator RepA | - |
| BED32_RS22235 () | 21091..21165 | - | 75 | WP_071598612.1 | RepA leader peptide Tap | - |
| BED32_RS00130 () | 21407..21661 | - | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| BED32_RS00135 () | 21799..22344 | - | 546 | WP_050294029.1 | Phospholipase D | VF |
| BED32_RS23600 () | 22530..22857 | - | 328 | Protein_27 | DDE-type integrase/transposase/recombinase | - |
| BED32_RS23605 () | 22942..23079 | + | 138 | Protein_28 | transposase | - |
| BED32_RS00140 () | 23148..24237 | + | 1090 | Protein_29 | IS3 family transposase ISYal1 | Transposase |
| BED32_RS00145 () | 24253..24919 | - | 667 | Protein_30 | Multifunctional conjugation protein TraI | Relaxase |
| BED32_RS00155 () | 25210..25572 | - | 363 | Protein_31 | hypothetical protein | - |
| BED32_RS00160 () | 25684..26382 | - | 699 | WP_050294038.1 | arsenic resistance NADPH-dependent reductase ArsH | - |
| BED32_RS00165 () | 26468..26788 | + | 321 | WP_013749489.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| BED32_RS00170 () | 26834..28122 | + | 1289 | Protein_34 | arsenite efflux transporter membrane subunit ArsB | - |
| BED32_RS00175 () | 28135..28560 | + | 426 | WP_010891244.1 | glutaredoxin-dependent arsenate reductase | - |
| BED32_RS00180 () | 28578..29159 | - | 582 | WP_050294040.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| BED32_RS00185 () | 29320..30171 | + | 852 | WP_050294041.1 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| BED32_RS00190 () | 30327..30779 | + | 453 | WP_010891241.1 | PprA | - |
| BED32_RS00195 () | 31101..31976 | - | 876 | WP_013749484.1 | DMT family transporter | - |
| BED32_RS00200 () | 32046..33464 | - | 1419 | WP_050294042.1 | Adhesin YadA | VF |
| BED32_RS23285 () | 34062..34623 | + | 562 | Protein_41 | transposase family protein | - |
| BED32_RS00210 () | 34719..35552 | - | 834 | Protein_42 | Tn3 family transposase TnpA_Tn3 | Transposase |
| BED32_RS00215 () | 35725..36075 | - | 351 | WP_016266427.1 | Yop proteins translocation protein M | VF |
| BED32_RS00225 () | 36167..37295 | - | 1129 | Protein_44 | IS3 family transposase ISYal1 | Transposase |
| BED32_RS00230 () | 37331..38444 | - | 1114 | Protein_45 | IS3 family transposase ISYal1 | Transposase |
| BED32_RS00235 () | 38757..38975 | + | 219 | WP_013749479.1 | hypothetical protein | - |
| BED32_RS00240 () | 39036..39506 | - | 471 | WP_010891240.1 | IS481 family transposase ISAzs36 | Transposase |
| BED32_RS00250 () | 39948..41114 | + | 1167 | WP_010891239.1 | Sporulation initiation inhibitor protein Soj | VF |
| BED32_RS00255 () | 41111..42076 | + | 966 | WP_050294053.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| BED32_RS23290 () | 42456..42748 | + | 293 | Protein_50 | IS6 family transposase ISEas1 | Transposase |
| BED32_RS00260 () | 42914..43156 | + | 243 | WP_005176524.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| BED32_RS00265 () | 43149..43448 | + | 300 | WP_014609469.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BED32_RS00270 () | 43589..44248 | - | 660 | WP_072089396.1 | Outer membrane virulence protein YopE | VF |
| BED32_RS00275 () | 44441..44833 | + | 393 | WP_010891236.1 | YopE regulator | VF |
| BED32_RS23295 () | 45068..46240 | + | 1173 | Protein_55 | IS3 family transposase | - |
| BED32_RS00290 () | 46444..46869 | + | 426 | WP_010891235.1 | hypothetical protein | VF |
| BED32_RS00295 () | 47097..48503 | - | 1407 | WP_069009740.1 | Tyrosine-protein phosphatase YopH | VF |
| BED32_RS00300 () | 49187..49534 | - | 348 | WP_050293994.1 | Yop proteins translocation protein M | VF |
| BED32_RS00305 () | 49734..50405 | - | 672 | WP_080478656.1 | Yop proteins translocation protein L | VF |
| BED32_RS00310 () | 50351..50980 | - | 630 | WP_057618913.1 | Yop proteins translocation protein K | VF |
| BED32_RS00315 () | 50980..51714 | - | 735 | WP_005176483.1 | Yop proteins translocation lipoprotein J | VF |
| BED32_RS00320 () | 51721..52068 | - | 348 | WP_005176480.1 | Yop proteins translocation protein I | VF |
| BED32_RS00325 () | 52069..52566 | - | 498 | WP_005176477.1 | Yop proteins translocation protein H | VF |
| BED32_RS00330 () | 52563..52910 | - | 348 | WP_014609476.1 | Putative Yop proteins translocation protein G | VF |
| BED32_RS00335 () | 52912..53175 | - | 264 | WP_014609477.1 | Yop proteins translocation protein F | VF |
| BED32_RS00340 () | 53172..53375 | - | 204 | WP_050293995.1 | Putative Yop proteins translocation protein E | VF |
| BED32_RS00345 () | 53372..54628 | - | 1257 | WP_050293996.1 | Yop proteins translocation protein D | VF |
| BED32_RS00350 () | 54625..56448 | - | 1824 | WP_050293997.1 | Yop proteins translocation protein C | VF |
| BED32_RS00355 () | 56454..56867 | - | 414 | WP_050293998.1 | Chaperone protein YscB | VF |
| BED32_RS00360 () | 57093..57191 | - | 99 | WP_010891223.1 | type III secretion system protein YscA | - |
| BED32_RS00365 () | 57271..58086 | - | 816 | WP_013749464.1 | Virulence regulon transcriptional activator VirF | VF |
| BED32_RS00370 () | 58210..58605 | - | 396 | WP_005176443.1 | Exoenzyme S synthesis protein B | VF |
| BED32_RS00375 () | 59181..60245 | - | 1065 | WP_010891221.1 | Yop proteins translocation protein U | VF |
| BED32_RS00380 () | 60245..61030 | - | 786 | WP_013749462.1 | Surface presentation of antigens protein SpaR | VF |
| BED32_RS00385 () | 61027..61293 | - | 267 | WP_057618912.1 | hypothetical protein | VF |
| BED32_RS00390 () | 61295..61948 | - | 654 | WP_005176829.1 | Surface presentation of antigens protein SpaP | VF |
| BED32_RS00395 () | 61945..62868 | - | 924 | WP_005176825.1 | Yop proteins translocation protein Q | VF |
| BED32_RS23610 () | 62865..63458 | - | 594 | Protein_78 | hypothetical protein | VF |
| BED32_RS23615 () | 63633..64517 | - | 885 | Protein_79 | hypothetical protein | VF |
| BED32_RS00405 () | 64517..64981 | - | 465 | WP_005176819.1 | Yop proteins translocation protein O | VF |
| BED32_RS00410 () | 64978..66296 | - | 1319 | Protein_81 | putative ATP synthase YscN | VF |
| BED32_RS00415 () | 66494..67375 | + | 882 | WP_050293999.1 | Outer membrane protein YopN | VF |
| BED32_RS00420 () | 67356..67634 | + | 279 | WP_002212965.1 | Protein TyeA | VF |
| BED32_RS00425 () | 67621..67992 | + | 372 | WP_010891215.1 | Chaperone protein SycN | VF |
| BED32_RS00430 () | 67989..68357 | + | 369 | WP_010891214.1 | Yop proteins translocation protein X | VF |
| BED32_RS00435 () | 68354..68698 | + | 345 | WP_002229791.1 | Chaperone protein YscY | VF |
| BED32_RS00440 () | 68685..70799 | + | 2115 | WP_057618910.1 | Invasion protein InvA | VF |
| BED32_RS00445 () | 70796..71236 | + | 441 | WP_010891212.1 | hypothetical protein | VF |
| BED32_RS00450 () | 71278..71565 | + | 288 | WP_010891211.1 | hypothetical protein | VF |
| BED32_RS00455 () | 71567..72547 | + | 981 | WP_069009749.1 | Virulence-associated V antigen | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|