MGE detailed information
MGE type: Prophage MGE length: 52173 bp
Accession: NZ_CP016904 Location: 3002412..3054584 Organism: Ralstonia solanacearum strain KACC 10709 Replicon: chromosome
Accession: NZ_CP016904 Location: 3002412..3054584 Organism: Ralstonia solanacearum strain KACC 10709 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LBM341_RS13955 () | 2999557..3002247 | - | 2691 | WP_081326683.1 | RHS repeat protein | - |
| LBM341_RS13960 () | 3002412..3003355 | - | 944 | Protein_2781 | IS3 family transposase ISRso10 | Transposase |
| LBM341_RS13965 () | 3003636..3004655 | - | 1020 | WP_019719041.1 | IS110 family transposase ISBcen4 | Transposase |
| LBM341_RS13970 () | 3004720..3004986 | - | 267 | Protein_2783 | IS3 family transposase ISRso10 | Transposase |
| LBM341_RS25770 () | 3005319..3005435 | - | 117 | Protein_2784 | DNA-binding protein | - |
| LBM341_RS13980 () | 3005664..3006437 | + | 774 | Protein_2785 | hypothetical protein ; Integrase | Integrase |
| LBM341_RS13985 () | 3006434..3006808 | + | 375 | WP_069079209.1 | site-specific recombinase resolvase | - |
| LBM341_RS13990 () | 3006805..3007278 | + | 474 | WP_069079210.1 | hypothetical protein | - |
| LBM341_RS25775 () | 3007336..3007995 | - | 660 | WP_157774207.1 | hypothetical protein | - |
| LBM341_RS25780 () | 3008147..3008296 | - | 150 | WP_155738951.1 | hypothetical protein | - |
| LBM341_RS14000 () | 3008293..3009258 | - | 966 | WP_016721735.1 | IS5 family transposase IS1405 | Transposase |
| LBM341_RS24730 () | 3009263..3009640 | - | 378 | WP_081326686.1 | AAA family ATPase | - |
| LBM341_RS14005 () | 3009682..3010638 | - | 957 | WP_069078857.1 | IS5 family transposase IS1420 | Transposase |
| LBM341_RS25785 () | 3010746..3011501 | + | 756 | WP_157774208.1 | hypothetical protein | - |
| LBM341_RS25425 () | 3011670..3011801 | - | 132 | Protein_2794 | IS5 family transposase IS1405 | Transposase |
| LBM341_RS14010 () | 3011850..3012083 | - | 234 | WP_081326699.1 | hypothetical protein | - |
| LBM341_RS24735 () | 3012108..3012380 | - | 273 | Protein_2796 | hypothetical protein | - |
| LBM341_RS14015 () | 3012460..3012711 | + | 252 | WP_019717749.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LBM341_RS14020 () | 3012708..3013121 | + | 414 | WP_016727753.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LBM341_RS14025 () | 3013193..3014215 | - | 1023 | WP_081326687.1 | DNA cytosine methyltransferase | - |
| LBM341_RS14030 () | 3014839..3015126 | + | 288 | WP_019717747.1 | DNA-binding protein Bv3F | VF |
| LBM341_RS14035 () | 3015169..3015813 | - | 645 | WP_069079212.1 | hypothetical protein | - |
| LBM341_RS14040 () | 3015788..3016009 | - | 222 | WP_069079338.1 | hypothetical protein | - |
| LBM341_RS14045 () | 3016006..3016401 | - | 396 | WP_069079213.1 | hypothetical protein | - |
| LBM341_RS14050 () | 3016410..3017183 | - | 774 | WP_069079214.1 | hypothetical protein | - |
| LBM341_RS14055 () | 3017306..3017752 | - | 447 | WP_069079215.1 | hypothetical protein | - |
| LBM341_RS14060 () | 3017758..3018060 | - | 303 | WP_069079216.1 | hypothetical protein | - |
| LBM341_RS14065 () | 3018063..3019067 | - | 1005 | WP_069079217.1 | major capsid protein | - |
| LBM341_RS14070 () | 3019074..3019451 | - | 378 | WP_069079218.1 | head decoration protein | - |
| LBM341_RS14075 () | 3019461..3020720 | - | 1260 | WP_069079219.1 | S49 family peptidase | - |
| LBM341_RS14080 () | 3020730..3022277 | - | 1548 | WP_069079220.1 | phage portal protein | - |
| LBM341_RS14085 () | 3022277..3022498 | - | 222 | WP_016727771.1 | hypothetical protein | - |
| LBM341_RS14090 () | 3022499..3022891 | - | 393 | WP_069079221.1 | hypothetical protein | - |
| LBM341_RS14095 () | 3022902..3023411 | - | 510 | WP_016727881.1 | hypothetical protein | - |
| LBM341_RS14100 () | 3023455..3025425 | - | 1971 | WP_069079222.1 | phage terminase large subunit family protein | - |
| LBM341_RS14105 () | 3025425..3025961 | - | 537 | WP_069079223.1 | elements of external origin | - |
| LBM341_RS14110 () | 3026058..3026552 | + | 495 | WP_069079224.1 | DUF3489 domain-containing protein | - |
| LBM341_RS14115 () | 3026680..3027030 | + | 351 | WP_069079339.1 | hypothetical protein | - |
| LBM341_RS14120 () | 3027127..3027315 | + | 189 | WP_069079225.1 | hypothetical protein | - |
| LBM341_RS14125 () | 3027540..3027905 | + | 366 | WP_058908873.1 | hypothetical protein | - |
| LBM341_RS14130 () | 3028159..3028815 | + | 657 | WP_011003873.1 | type III secretion system effector protein | - |
| LBM341_RS14135 () | 3028823..3030091 | - | 1269 | WP_069079226.1 | site-specific DNA-methyltransferase | - |
| LBM341_RS14140 () | 3030088..3031488 | - | 1401 | WP_069079227.1 | site-specific DNA-methyltransferase | - |
| LBM341_RS14145 () | 3032138..3032437 | - | 300 | WP_021154680.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LBM341_RS14150 () | 3032437..3032703 | - | 267 | WP_016725341.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| LBM341_RS14155 () | 3032758..3033141 | - | 384 | WP_011003114.1 | hypothetical protein | - |
| LBM341_RS14160 () | 3033134..3033343 | - | 210 | WP_016725629.1 | hypothetical protein | - |
| LBM341_RS14165 () | 3033345..3033809 | - | 465 | WP_016725339.1 | hypothetical protein | - |
| LBM341_RS14170 () | 3033940..3036228 | - | 2289 | WP_069079228.1 | hypothetical protein | - |
| LBM341_RS14175 () | 3036225..3036485 | - | 261 | WP_016725337.1 | DNA-binding protein | - |
| LBM341_RS14180 () | 3036482..3037240 | - | 759 | WP_069079229.1 | hypothetical protein | - |
| LBM341_RS14185 () | 3037227..3037775 | - | 549 | WP_016725626.1 | HNH endonuclease | - |
| LBM341_RS14190 () | 3037775..3038287 | - | 513 | WP_038937632.1 | hypothetical protein | - |
| LBM341_RS14195 () | 3038295..3038942 | - | 648 | WP_016725624.1 | hypothetical protein | - |
| LBM341_RS14200 () | 3038939..3039844 | - | 906 | WP_011003123.1 | ATP-binding protein | - |
| LBM341_RS24750 () | 3039816..3040349 | - | 534 | WP_043876681.1 | HNH endonuclease | - |
| LBM341_RS14210 () | 3040364..3040846 | - | 483 | WP_011003125.1 | hypothetical protein | - |
| LBM341_RS14215 () | 3040857..3041120 | - | 264 | WP_089190378.1 | DNA-binding protein | - |
| LBM341_RS14220 () | 3041349..3041810 | + | 462 | WP_016722459.1 | helix-turn-helix domain-containing protein | - |
| LBM341_RS14225 () | 3041860..3044097 | + | 2238 | WP_069079230.1 | hypothetical protein | - |
| LBM341_RS14230 () | 3044257..3045435 | + | 1179 | WP_069079231.1 | hypothetical protein | - |
| LBM341_RS24755 () | 3045657..3045875 | + | 219 | WP_172833494.1 | hypothetical protein | - |
| LBM341_RS14235 () | 3045875..3046324 | + | 450 | WP_013210977.1 | DUF2924 domain-containing protein | - |
| LBM341_RS14240 () | 3046321..3047709 | + | 1389 | WP_069079232.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| LBM341_RS14245 () | 3047706..3048077 | + | 372 | WP_069079233.1 | site-specific recombinase resolvase | - |
| LBM341_RS14250 () | 3048074..3048544 | + | 471 | WP_069078856.1 | hypothetical protein | - |
| LBM341_RS14255 () | 3048810..3050528 | + | 1719 | WP_069079234.1 | AAA family ATPase | - |
| LBM341_RS14260 () | 3050694..3054515 | - | 3822 | WP_069079235.1 | SIR2 family protein | - |
| LBM341_RS14270 () | 3055327..3057033 | - | 1707 | WP_069079236.1 | thiosulfohydrolase SoxB | - |
| LBM341_RS14275 () | 3057030..3057548 | - | 519 | WP_016722445.1 | TlpA family protein disulfide reductase | - |
| LBM341_RS14280 () | 3057557..3058210 | - | 654 | WP_016722444.1 | sulfur oxidation c-type cytochrome SoxX | - |
| LBM341_RS14285 () | 3058207..3058980 | - | 774 | WP_043885974.1 | sulfur oxidation c-type cytochrome SoxA | - |
| LBM341_RS14290 () | 3059041..3059499 | - | 459 | WP_011003142.1 | DsrE family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|