MGE detailed information
MGE type: Mobilizable plasmid MGE length: 173592 bp
Accession: NZ_CP016892 Location: 1..173592 Organism: Pantoea agglomerans strain C410P1 Replicon: plasmid unnamed3
Accession: NZ_CP016892 Location: 1..173592 Organism: Pantoea agglomerans strain C410P1 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BEE12_RS22935 () | 999..1268 | + | 270 | WP_010257103.1 | DUF1471 domain-containing protein | - |
| BEE12_RS22940 () | 1582..2532 | - | 951 | WP_069027113.1 | sulfonate ABC transporter substrate-binding protein | - |
| BEE12_RS22945 () | 2628..4517 | - | 1890 | WP_069027114.1 | Transcriptional regulatory protein ZraR | VF |
| BEE12_RS22950 () | 4792..5964 | + | 1173 | WP_069027115.1 | FMNH2-dependent alkanesulfonate monooxygenase | - |
| BEE12_RS22955 () | 5984..7396 | + | 1413 | WP_069027116.1 | FAD-dependent oxidoreductase | - |
| BEE12_RS22960 () | 7465..8874 | + | 1410 | WP_069027117.1 | LLM class flavin-dependent oxidoreductase | - |
| BEE12_RS22965 () | 9234..10693 | + | 1460 | Protein_7 | MFS transporter | - |
| BEE12_RS22970 () | 10686..11903 | + | 1218 | WP_069027118.1 | monooxygenase | - |
| BEE12_RS22975 () | 12203..12673 | - | 471 | WP_069027119.1 | SgcJ/EcaC family oxidoreductase | - |
| BEE12_RS22980 () | 13621..14658 | + | 1038 | WP_069027120.1 | tyrosine-type recombinase/integrase | - |
| BEE12_RS22990 () | 15031..15627 | - | 597 | WP_155763657.1 | amidohydrolase family protein | - |
| BEE12_RS22995 () | 16166..17197 | + | 1032 | WP_081325998.1 | alpha/beta hydrolase | - |
| BEE12_RS23000 () | 17323..19650 | - | 2328 | WP_069027124.1 | Fe(2+) transporter FeoB | VF |
| BEE12_RS23005 () | 19650..19874 | - | 225 | WP_031593784.1 | FeoA domain-containing protein | - |
| BEE12_RS23010 () | 20213..20683 | + | 471 | WP_064703137.1 | WbuC family cupin fold metalloprotein | - |
| BEE12_RS23015 () | 21117..21497 | - | 381 | WP_069027125.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| BEE12_RS24440 () | 22175..22594 | - | 420 | WP_071941190.1 | DUF1090 family protein | - |
| BEE12_RS23025 () | 22968..23204 | + | 237 | WP_031593778.1 | YgdI/YgdR family lipoprotein | - |
| BEE12_RS23030 () | 23268..23810 | + | 543 | WP_069027126.1 | porin | - |
| BEE12_RS23035 () | 23923..24225 | + | 303 | WP_069027127.1 | hypothetical protein | - |
| BEE12_RS24445 () | 24278..24457 | - | 180 | WP_071941192.1 | DUF2256 domain-containing protein | - |
| BEE12_RS23040 () | 25639..26040 | + | 402 | WP_010257055.1 | H-NS histone family protein | - |
| BEE12_RS23045 () | 26269..26715 | - | 447 | WP_031593775.1 | VOC family protein | - |
| BEE12_RS23050 () | 26784..28346 | - | 1563 | WP_069027128.1 | Phytochrome-like protein cph2 | VF |
| BEE12_RS23055 () | 28622..29023 | + | 402 | WP_069027129.1 | H-NS histone family protein | - |
| BEE12_RS23060 () | 29115..30107 | - | 993 | WP_069027130.1 | HTH-type transcriptional regulator CdhR | VF |
| BEE12_RS23065 () | 30181..30960 | - | 780 | WP_039387394.1 | MBL fold metallo-hydrolase | - |
| BEE12_RS23070 () | 31458..31979 | + | 522 | WP_081273774.1 | hypothetical protein | - |
| BEE12_RS23075 () | 32029..33045 | - | 1017 | WP_039387390.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| BEE12_RS23080 () | 33150..35123 | - | 1974 | WP_069027131.1 | Aerotaxis receptor | VF |
| BEE12_RS23085 () | 35464..35703 | + | 240 | WP_069027132.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BEE12_RS23090 () | 35703..35990 | + | 288 | WP_069027133.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BEE12_RS23095 () | 36035..36331 | - | 297 | WP_039387382.1 | hypothetical protein | - |
| BEE12_RS24450 () | 36533..36709 | + | 177 | WP_010257023.1 | stress-induced protein | - |
| BEE12_RS23100 () | 36773..37669 | - | 897 | WP_069027134.1 | HTH-type transcriptional regulator PgrR | VF |
| BEE12_RS23105 () | 37803..38996 | + | 1194 | WP_069027135.1 | MFS transporter | - |
| BEE12_RS23110 () | 39065..40105 | + | 1041 | WP_069027136.1 | alpha/beta hydrolase | - |
| BEE12_RS23115 () | 40165..43269 | - | 3105 | WP_069027137.1 | Multidrug resistance protein MexB | VF |
| BEE12_RS25400 () | 43560..43727 | + | 168 | WP_162848981.1 | hypothetical protein | - |
| BEE12_RS23120 () | 44062..44409 | + | 348 | WP_069027138.1 | HNH nuclease YajD | - |
| BEE12_RS23125 () | 44579..45025 | - | 447 | WP_069027212.1 | hypothetical protein | - |
| BEE12_RS23130 () | 45380..47707 | + | 2328 | WP_069027139.1 | FdhF/YdeP family oxidoreductase | - |
| BEE12_RS23135 () | 47945..49060 | + | 1116 | WP_031593084.1 | metallophosphoesterase | - |
| BEE12_RS23140 () | 49138..49938 | + | 801 | WP_069027140.1 | MBL fold metallo-hydrolase | - |
| BEE12_RS23145 () | 49994..51919 | - | 1926 | WP_069027141.1 | Methyl-accepting chemotaxis protein I | VF |
| BEE12_RS23150 () | 52523..54186 | - | 1664 | Protein_46 | Methyl-accepting chemotaxis protein III | VF |
| BEE12_RS23155 () | 54828..55157 | + | 330 | WP_010256979.1 | hypothetical protein | - |
| BEE12_RS23165 () | 56423..57652 | + | 1230 | WP_069027213.1 | diguanylate phosphodiesterase | - |
| BEE12_RS23170 () | 57812..58021 | + | 210 | WP_010256969.1 | CsbD family protein | - |
| BEE12_RS23175 () | 58217..58981 | + | 765 | WP_031593092.1 | MerR family transcriptional regulator | - |
| BEE12_RS23180 () | 59055..59543 | - | 489 | WP_069027142.1 | Hsp20 family protein | - |
| BEE12_RS24455 () | 59719..59976 | - | 258 | WP_071941194.1 | transcriptional regulator | - |
| BEE12_RS23185 () | 60327..60551 | + | 225 | WP_010256955.1 | DUF3606 domain-containing protein | - |
| BEE12_RS23190 () | 61070..62854 | + | 1785 | WP_069027143.1 | GGDEF and EAL domain-containing protein | - |
| BEE12_RS23195 () | 63056..63265 | + | 210 | WP_069027144.1 | DUF1471 domain-containing protein | - |
| BEE12_RS23200 () | 63518..64705 | + | 1188 | WP_069027145.1 | diguanylate phosphodiesterase | - |
| BEE12_RS23205 () | 66068..67141 | - | 1074 | WP_031593098.1 | RepB family plasmid replication initiator protein | - |
| BEE12_RS23210 () | 69157..70359 | + | 1203 | WP_010256940.1 | Plasmid partition protein A | VF |
| BEE12_RS23215 () | 70356..71327 | + | 972 | WP_069027146.1 | ParB/RepB/Spo0J family partition protein | - |
| BEE12_RS23220 () | 71547..72473 | + | 927 | WP_069027147.1 | aminoimidazole riboside kinase | - |
| BEE12_RS23225 () | 72631..74166 | + | 1536 | WP_031593101.1 | carbohydrate porin | - |
| BEE12_RS23230 () | 74234..75604 | + | 1371 | WP_010256928.1 | sucrose-specific PTS transporter subunit IIBC | - |
| BEE12_RS23235 () | 75604..77013 | + | 1410 | WP_069027148.1 | sucrose-6-phosphate hydrolase | - |
| BEE12_RS23240 () | 77043..78047 | + | 1005 | WP_039387344.1 | LacI family DNA-binding transcriptional regulator | - |
| BEE12_RS23245 () | 78083..79273 | - | 1191 | WP_069027149.1 | cytochrome P450 | - |
| BEE12_RS23250 () | 79296..79841 | - | 546 | WP_031593108.1 | chorismate mutase | - |
| BEE12_RS23255 () | 80179..81345 | - | 1167 | WP_031593109.1 | glutathione-dependent formaldehyde dehydrogenase | - |
| BEE12_RS23260 () | 81346..81879 | - | 534 | WP_064703105.1 | SRPBCC family protein | - |
| BEE12_RS23265 () | 82099..82344 | + | 246 | WP_069027150.1 | hypothetical protein | - |
| BEE12_RS23270 () | 82346..83257 | - | 912 | WP_069027151.1 | GNAT family N-acetyltransferase | - |
| BEE12_RS23275 () | 83740..83949 | + | 210 | WP_064703104.1 | hypothetical protein | - |
| BEE12_RS23280 () | 84353..85936 | + | 1584 | WP_069027152.1 | sensor domain-containing diguanylate cyclase | - |
| BEE12_RS23285 () | 85957..87738 | - | 1782 | WP_069027153.1 | GGDEF and EAL domain-containing protein | - |
| BEE12_RS23290 () | 88085..89518 | + | 1434 | WP_069027154.1 | Methyl-accepting chemotaxis protein II | VF |
| BEE12_RS23300 () | 89881..90120 | + | 240 | WP_069027155.1 | transcriptional regulator | - |
| BEE12_RS23310 () | 90526..92667 | + | 2142 | Protein_76 | putative signaling protein | VF |
| BEE12_RS23315 () | 92715..93299 | - | 585 | WP_069027157.1 | GNAT family N-acetyltransferase | - |
| BEE12_RS23320 () | 93559..94128 | + | 570 | WP_069027158.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| BEE12_RS23325 () | 94415..95881 | + | 1467 | WP_069027159.1 | YsnF/AvaK domain-containing protein | - |
| BEE12_RS23330 () | 96114..96413 | + | 300 | WP_069027160.1 | type II toxin-antitoxin system HigB family toxin | - |
| BEE12_RS23335 () | 96413..96796 | + | 384 | WP_064703094.1 | hypothetical protein | - |
| BEE12_RS23345 () | 97522..100059 | + | 2538 | WP_069027162.1 | UvrABC system protein A | VF |
| BEE12_RS23350 () | 100230..100481 | - | 252 | WP_031593747.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | - |
| BEE12_RS23355 () | 100635..100916 | + | 282 | WP_031593746.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BEE12_RS23360 () | 100916..101230 | + | 315 | WP_039387307.1 | HigA family addiction module antidote protein | - |
| BEE12_RS23365 () | 101282..102121 | - | 840 | WP_069027163.1 | MBL fold metallo-hydrolase | - |
| BEE12_RS23370 () | 102289..103602 | - | 1314 | WP_031593743.1 | CitMHS family transporter | - |
| BEE12_RS23375 () | 103941..105392 | - | 1452 | WP_031593742.1 | Flagellin | VF |
| BEE12_RS23380 () | 105598..106371 | - | 774 | WP_069027164.1 | Diacetyl reductase [(S)-acetoin forming] | VF |
| BEE12_RS23385 () | 106393..108072 | - | 1680 | WP_010256852.1 | acetolactate synthase AlsS | - |
| BEE12_RS23390 () | 108087..108869 | - | 783 | WP_069027165.1 | acetolactate decarboxylase | - |
| BEE12_RS23395 () | 108974..109879 | + | 906 | WP_069027166.1 | LysR family transcriptional regulator | - |
| BEE12_RS23400 () | 109951..110196 | + | 246 | WP_010256845.1 | hypothetical protein | - |
| BEE12_RS23405 () | 110247..113290 | - | 3044 | Protein_94 | efflux RND transporter permease subunit | - |
| BEE12_RS23410 () | 113287..114420 | - | 1134 | WP_069027167.1 | efflux RND transporter periplasmic adaptor subunit | - |
| BEE12_RS23415 () | 114514..115683 | - | 1170 | WP_069027168.1 | HAMP domain-containing protein | - |
| BEE12_RS23420 () | 115680..116378 | - | 699 | WP_069027169.1 | Response regulator ArlR | VF |
| BEE12_RS23425 () | 116508..117293 | + | 786 | WP_069027170.1 | MipA/OmpV family protein | - |
| BEE12_RS23435 () | 117500..117814 | - | 315 | WP_039387287.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| BEE12_RS23440 () | 117811..119211 | - | 1401 | WP_069027172.1 | glycoside hydrolase family 1 protein | - |
| BEE12_RS23445 () | 119232..120560 | - | 1329 | WP_031594545.1 | PTS sugar transporter subunit IIC | - |
| BEE12_RS23450 () | 120557..120886 | - | 330 | WP_031594544.1 | PTS sugar transporter subunit IIB | - |
| BEE12_RS23455 () | 121175..122128 | + | 954 | WP_069027173.1 | LacI family transcriptional regulator | - |
| BEE12_RS23460 () | 122141..123025 | - | 885 | WP_069027174.1 | ROK family protein | - |
| BEE12_RS23465 () | 123266..124549 | - | 1284 | WP_069027175.1 | beta-ketoacyl-ACP synthase II | - |
| BEE12_RS23470 () | 124787..125401 | - | 615 | WP_069027176.1 | Fatty acid metabolism regulator protein | VF |
| BEE12_RS23475 () | 125809..126639 | + | 831 | WP_069027177.1 | winged helix-turn-helix domain-containing protein | - |
| BEE12_RS23480 () | 126636..127139 | + | 504 | WP_069027178.1 | hypothetical protein | - |
| BEE12_RS23485 () | 127228..127659 | - | 432 | WP_064703076.1 | DcrB-related protein | - |
| BEE12_RS23490 () | 127652..129835 | - | 2184 | WP_069027179.1 | peptidase domain-containing ABC transporter | - |
| BEE12_RS23495 () | 129853..131112 | - | 1260 | WP_069027180.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| BEE12_RS23500 () | 131138..132460 | - | 1323 | WP_069027181.1 | TolC family outer membrane protein | - |
| BEE12_RS23505 () | 132497..133159 | - | 663 | WP_069027182.1 | response regulator transcription factor | - |
| BEE12_RS23510 () | 133216..134277 | - | 1062 | WP_069027183.1 | S-fimbrial protein subunit SfaG | VF |
| BEE12_RS23515 () | 134290..136875 | - | 2586 | WP_081326000.1 | Outer membrane usher protein HtrE | VF |
| BEE12_RS23520 () | 136901..137638 | - | 738 | WP_071941196.1 | putative fimbrial chaperone YadV | VF |
| BEE12_RS23525 () | 137699..138229 | - | 531 | WP_069027186.1 | Major fimbrial subunit SMF-1 | VF |
| BEE12_RS23535 () | 138569..138886 | - | 318 | WP_069027187.1 | hypothetical protein | - |
| BEE12_RS23540 () | 139917..140506 | + | 590 | Protein_119 | helix-turn-helix domain-containing protein | - |
| BEE12_RS23545 () | 140544..141179 | + | 636 | WP_069027188.1 | LuxR family transcriptional regulator | - |
| BEE12_RS25175 () | 141293..141571 | + | 279 | WP_133248919.1 | hypothetical protein | - |
| BEE12_RS23550 () | 141745..142061 | - | 317 | Protein_122 | NirD/YgiW/YdeI family stress tolerance protein | - |
| BEE12_RS23555 () | 142103..144958 | - | 2856 | WP_069027189.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| BEE12_RS24465 () | 145566..145814 | + | 249 | WP_071941198.1 | DUF333 domain-containing protein | - |
| BEE12_RS24780 () | 146512..148395 | + | 1884 | Protein_125 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| BEE12_RS24785 () | 149470..150690 | + | 1221 | Protein_126 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| BEE12_RS23565 () | 150871..151074 | - | 204 | WP_031593862.1 | hemolysin | - |
| BEE12_RS23570 () | 151306..151758 | - | 453 | WP_069027191.1 | PACE efflux transporter | - |
| BEE12_RS23575 () | 152392..153402 | - | 1011 | WP_031593860.1 | LacI family DNA-binding transcriptional regulator | - |
| BEE12_RS23580 () | 153511..154524 | + | 1014 | WP_069027192.1 | Gfo/Idh/MocA family oxidoreductase | - |
| BEE12_RS23585 () | 154668..155204 | + | 537 | WP_069027193.1 | tetratricopeptide repeat protein | - |
| BEE12_RS23590 () | 155241..155741 | + | 501 | WP_081326001.1 | RNA polymerase sigma factor | - |
| BEE12_RS23595 () | 155738..156529 | + | 792 | WP_069027195.1 | hypothetical protein | - |
| BEE12_RS23600 () | 156556..157134 | - | 579 | WP_069027214.1 | YceI family protein | - |
| BEE12_RS23605 () | 157833..158969 | + | 1137 | WP_069027196.1 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
| BEE12_RS23610 () | 158971..159954 | + | 984 | WP_069027197.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| BEE12_RS23615 () | 159951..161930 | + | 1980 | WP_069027198.1 | Bifunctional polymyxin resistance protein ArnA | VF |
| BEE12_RS23620 () | 161930..162832 | + | 903 | WP_069027199.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase | - |
| BEE12_RS23625 () | 162832..164499 | + | 1668 | WP_069027200.1 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase | - |
| BEE12_RS23630 () | 164499..164819 | + | 321 | WP_069027201.1 | EamA family transporter | - |
| BEE12_RS23635 () | 164816..165181 | + | 366 | WP_069027202.1 | 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase | - |
| BEE12_RS23640 () | 165288..165983 | - | 696 | WP_069027203.1 | haloacid dehalogenase type II | - |
| BEE12_RS23645 () | 166265..166465 | - | 201 | Protein_143 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BEE12_RS23650 () | 166630..167550 | + | 921 | WP_069027204.1 | Recombination-promoting nuclease RpnA | VF |
| BEE12_RS24470 () | 167647..167931 | - | 285 | Protein_145 | transposase | - |
| BEE12_RS23655 () | 167951..168181 | - | 231 | Protein_146 | ISNCY family transposase ISKpn21 | Transposase |
| BEE12_RS23660 () | 168439..169257 | + | 819 | WP_069027206.1 | DUF4225 domain-containing protein | - |
| BEE12_RS23665 () | 169254..169568 | - | 315 | WP_069027207.1 | hypothetical protein | - |
| BEE12_RS23670 () | 169931..170218 | - | 288 | WP_069027208.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BEE12_RS23675 () | 170215..170466 | - | 252 | WP_039387444.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| BEE12_RS23680 () | 170607..172259 | - | 1653 | WP_069027209.1 | intermembrane transport protein PqiB | - |
| BEE12_RS23685 () | 172854..173180 | + | 327 | WP_033759973.1 | DUF3302 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|