NZ_CP0168911..216117

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 216117 bp
Accession: NZ_CP016891        Location: 1..216117         Organism: Pantoea agglomerans strain C410P1       Replicon: plasmid unnamed2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BEE12_RS21865 () 647..1180 + 534 WP_069026950.1 hypothetical protein VF
BEE12_RS21870 () 1203..2024 - 822 WP_069026951.1 DUF945 domain-containing protein -
BEE12_RS21875 () 2074..2388 - 315 WP_069026952.1 hypothetical protein -
BEE12_RS21880 () 3033..3341 - 309 WP_069026953.1 hypothetical protein -
BEE12_RS24720 () 3396..3968 - 573 WP_081325975.1 hypothetical protein -
BEE12_RS21890 () 3965..4114 - 150 WP_069026954.1 succinate dehydrogenase flavoprotein subunit -
BEE12_RS21895 () 4199..4552 - 354 WP_069026955.1 hypothetical protein -
BEE12_RS21900 () 4570..4965 - 396 WP_069026956.1 hypothetical protein -
BEE12_RS21905 () 5553..5867 - 315 WP_069026957.1 hypothetical protein -
BEE12_RS25120 () 5921..6040 + 120 Protein_9 transposase domain-containing protein -
BEE12_RS21915 () 6300..6961 + 662 Protein_10 DUF421 domain-containing protein -
BEE12_RS21920 () 7611..8651 - 1041 WP_069026959.1 CAP-Gly protein -
BEE12_RS21925 () 9052..9968 - 917 Protein_12 spore coat protein U domain-containing protein -
BEE12_RS21930 () 10245..10772 - 528 WP_081325977.1 hypothetical protein VF
BEE12_RS21935 () 10769..12316 - 1548 WP_069026961.1 F1 capsule-anchoring protein VF
BEE12_RS25365 () 12345..12488 - 144 WP_167620279.1 hypothetical protein -
BEE12_RS21940 () 12542..13063 - 522 WP_167620280.1 hypothetical protein VF
BEE12_RS21945 () 13111..13632 - 522 WP_155763629.1 spore coat U domain-containing protein -
BEE12_RS21950 () 13641..14174 - 534 WP_069026963.1 hypothetical protein VF
BEE12_RS25125 () 15078..15272 - 195 WP_155763631.1 PerC family transcriptional regulator -
BEE12_RS21955 () 16331..16906 - 576 Protein_20 DUF1281 domain-containing protein -
BEE12_RS25485 () 17422..17616 - 195 WP_069026964.1 hypothetical protein -
BEE12_RS21965 () 18244..18663 + 420 WP_069027104.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
BEE12_RS21970 () 18678..19951 + 1274 Protein_23 translesion error-prone DNA polymerase V subunit UmuC -
BEE12_RS21975 () 20360..20602 - 243 WP_069026965.1 hypothetical protein -
BEE12_RS21980 () 20722..21042 - 321 WP_069026966.1 stability/partitioning determinant -
BEE12_RS21985 () 21216..21860 - 645 WP_010260387.1 ParA family protein -
BEE12_RS21990 () 22157..22948 - 792 WP_069026967.1 tyrosine-type recombinase/integrase -
BEE12_RS21995 () 23510..24391 + 882 WP_050680631.1 hypothetical protein -
BEE12_RS22000 () 24519..24977 - 459 WP_050680630.1 type II toxin-antitoxin system PemK/MazF family toxin -
BEE12_RS22005 () 25122..27104 + 1983 WP_050680629.1 DEAD/DEAH box helicase -
BEE12_RS22010 () 27101..27739 + 639 WP_069026968.1 hypothetical protein -
BEE12_RS22015 () 27782..29044 - 1263 WP_069026969.1 translesion error-prone DNA polymerase V subunit UmuC -
BEE12_RS22020 () 29047..29424 - 378 WP_069026970.1 phage repressor protein -
BEE12_RS22025 () 29562..30875 - 1314 Protein_34 DUF1173 family protein -
BEE12_RS22030 () 31147..33446 - 2300 Protein_35 Tn3 family transposase TnpA_TnEc1 Transposase
BEE12_RS22035 () 33614..34261 + 648 WP_069026971.1 Tn3 family transposase TnpR_TnEc1 Transposase
BEE12_RS22040 () 34251..35551 + 1301 Protein_37 M20 family metallopeptidase -
BEE12_RS22045 () 36283..36648 - 366 WP_155763633.1 hypothetical protein -
BEE12_RS22050 () 36756..37262 - 507 WP_039392538.1 DNA repair protein RadC -
BEE12_RS22055 () 37315..37947 + 633 WP_071941171.1 IS66 family transposase ISCro1 Transposase
BEE12_RS22060 () 37944..38291 + 348 WP_069026973.1 IS66 family transposase ISCro1 Transposase
BEE12_RS22065 () 38311..39894 + 1584 WP_069026974.1 IS66 family transposase ISCro1 Transposase
BEE12_RS22070 () 40957..41373 + 417 WP_069026975.1 hypothetical protein -
BEE12_RS22075 () 41556..42332 - 777 WP_069026976.1 N-acetylmuramoyl-L-alanine amidase -
BEE12_RS25130 () 42712..43522 + 811 Protein_45 IS66 family transposase -
BEE12_RS22085 () 43787..44083 - 297 WP_081325982.1 hypothetical protein -
BEE12_RS22090 () 44645..45715 - 1071 WP_069026978.1 acyltransferase -
BEE12_RS22095 () 46285..47367 + 1083 WP_069026979.1 LD-carboxypeptidase -
BEE12_RS22100 () 47733..48192 + 460 Protein_49 Methyl-accepting chemotaxis protein IV VF
BEE12_RS22105 () 49408..50000 - 593 Protein_50 DUF2913 family protein -
BEE12_RS22110 () 50019..50243 - 225 WP_069026981.1 KTSC domain-containing protein -
BEE12_RS22115 () 50584..50892 - 309 WP_155763635.1 hypothetical protein -
BEE12_RS22125 () 51496..52536 - 1041 WP_069026984.1 CAP-Gly protein -
BEE12_RS22130 () 53325..53531 + 207 WP_069026985.1 hypothetical protein -
BEE12_RS22135 () 53782..54009 - 228 Protein_55 DNA polymerase V subunit UmuC -
BEE12_RS22140 () 54012..54389 - 378 WP_069026987.1 phage repressor protein -
BEE12_RS22145 () 54546..56225 + 1680 WP_069027106.1 IS3 family transposase ISAma2 Transposase
BEE12_RS22150 () 56228..57136 + 909 WP_069026988.1 TniB family NTP-binding protein -
BEE12_RS22155 () 57133..58344 + 1212 WP_069026989.1 TniQ family protein -
BEE12_RS22160 () 58411..59025 + 615 WP_069026990.1 Tn3 family transposase TnpR_ISMex22 Transposase
BEE12_RS22165 () 59069..59676 + 608 Protein_61 recombinase family protein -
BEE12_RS22170 () 60300..61181 + 882 WP_081325995.1 hypothetical protein -
BEE12_RS22175 () 61373..62677 - 1305 WP_069026993.1 DUF1173 family protein -
BEE12_RS24370 () 62715..63214 - 500 Protein_64 endonuclease -
BEE12_RS22180 () 63187..63390 + 204 WP_069026995.1 hypothetical protein -
BEE12_RS22185 () 63777..64643 + 867 WP_069026997.1 RepB family plasmid replication initiator protein -
BEE12_RS22190 () 65770..66978 + 1209 WP_069026998.1 Plasmid partition protein A VF
BEE12_RS22195 () 66975..67961 + 987 WP_069026999.1 ParB/RepB/Spo0J family partition protein -
BEE12_RS25135 () 68492..68821 + 330 WP_155763637.1 hypothetical protein -
BEE12_RS22205 () 68948..69772 - 825 WP_069027001.1 tyrosine-type recombinase/integrase -
BEE12_RS22210 () 70235..70441 - 207 WP_069027002.1 type II toxin-antitoxin system YafQ family toxin Toxin Detail
BEE12_RS22215 () 70511..70768 - 258 WP_069027003.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
BEE12_RS22220 () 71114..71920 - 807 WP_069027004.1 helix-turn-helix domain-containing protein -
BEE12_RS22225 () 72106..72795 + 690 WP_069027005.1 3-oxoacid CoA-transferase subunit A -
BEE12_RS22230 () 72806..73458 + 653 Protein_75 3-oxoacid CoA-transferase subunit B -
BEE12_RS22235 () 73469..74671 + 1203 WP_069027006.1 3-oxoadipyl-CoA thiolase -
BEE12_RS22240 () 74675..76015 + 1341 WP_069027007.1 3-carboxy-cis,cis-muconate cycloisomerase -
BEE12_RS22245 () 76012..77154 + 1143 WP_069027008.1 3-oxoadipate enol-lactonase -
BEE12_RS22250 () 77164..78096 - 933 WP_069027009.1 LysR family transcriptional regulator -
BEE12_RS22255 () 78157..78777 - 621 WP_069027010.1 protocatechuate 3,4-dioxygenase subunit alpha -
BEE12_RS22260 () 78774..79514 - 741 WP_069027011.1 protocatechuate 3,4-dioxygenase subunit beta -
BEE12_RS22265 () 79745..81637 + 1893 WP_069027012.1 sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein -
BEE12_RS22270 () 81924..83298 + 1375 Protein_83 aromatic acid/H+ symport family MFS transporter -
BEE12_RS22285 () 84759..85580 + 822 WP_081325983.1 GGDEF domain-containing protein -
BEE12_RS22295 () 86101..86991 - 891 WP_208863862.1 winged helix-turn-helix domain-containing protein -
BEE12_RS22300 () 87413..87964 + 552 WP_069027014.1 Major fimbrial subunit VF
BEE12_RS22305 () 88004..88672 + 669 WP_069027015.1 Chaperone protein FimC VF
BEE12_RS22310 () 88691..91174 + 2484 WP_069027016.1 Outer membrane usher protein HtrE VF
BEE12_RS22315 () 91185..92489 + 1305 WP_069027017.1 fimbrial protein -
BEE12_RS22320 () 92489..93226 + 738 WP_069027018.1 molecular chaperone -
BEE12_RS22325 () 93316..93600 + 285 WP_069027019.1 helix-turn-helix transcriptional regulator -
BEE12_RS22330 () 93701..93904 + 204 WP_069027020.1 hypothetical protein -
BEE12_RS22335 () 94058..95208 + 1151 Protein_94 IS30 family transposase -
BEE12_RS22340 () 95324..96069 - 746 Protein_95 metallophosphoesterase -
BEE12_RS24380 () 96240..96437 - 198 WP_081325984.1 transposase -
BEE12_RS22345 () 96503..96925 + 423 Protein_97 hypothetical protein -
BEE12_RS22350 () 96985..97926 - 942 WP_069027021.1 Recombination-promoting nuclease RpnA VF
BEE12_RS22355 () 98470..99314 - 845 Protein_99 AraC family transcriptional regulator -
BEE12_RS22360 () 99536..101366 + 1831 Protein_100 DUF2264 domain-containing protein -
BEE12_RS22365 () 101452..102723 + 1272 WP_069027022.1 oligosaccharide MFS transporter -
BEE12_RS22370 () 102775..103965 + 1191 WP_069027023.1 glycoside hydrolase family 88 protein -
BEE12_RS22375 () 104264..104959 + 696 WP_069027024.1 porin OmpL -
BEE12_RS25375 () 105071..105247 + 177 WP_167620276.1 hypothetical protein -
BEE12_RS22380 () 105263..105655 + 393 WP_081325986.1 DJ-1/PfpI family protein -
BEE12_RS24385 () 105718..106017 + 300 WP_071941179.1 SDR family NAD(P)-dependent oxidoreductase -
BEE12_RS22385 () 106334..107188 + 855 WP_069027025.1 IS91 family transposase ISMno24 Transposase
BEE12_RS24395 () 107459..108763 + 1305 Protein_108 DUF1173 family protein -
BEE12_RS22395 () 108947..109165 - 219 WP_069027109.1 hypothetical protein -
BEE12_RS22400 () 109168..109506 - 339 Protein_110 recombinase family protein -
BEE12_RS22405 () 109882..110067 - 186 WP_069027026.1 hypothetical protein -
BEE12_RS22410 () 110968..112317 + 1350 WP_069027027.1 hypothetical protein -
BEE12_RS22415 () 112310..112987 + 678 WP_069027028.1 lasso peptide biosynthesis B2 protein -
BEE12_RS25140 () 112992..113321 + 330 WP_155763639.1 hypothetical protein -
BEE12_RS22420 () 113609..114721 + 1113 WP_069027029.1 Multidrug resistance ABC transporter ATP-binding/permease protein BmrA VF
BEE12_RS22425 () 114808..115992 + 1185 WP_069027030.1 efflux RND transporter periplasmic adaptor subunit -
BEE12_RS22430 () 115989..117926 + 1938 WP_069027031.1 Macrolide export ATP-binding/permease protein MacB VF
BEE12_RS25145 () 118073..118228 - 156 WP_155763641.1 hypothetical protein -
BEE12_RS22435 () 118660..119004 - 345 WP_155763643.1 hypothetical protein -
BEE12_RS25380 () 119691..120038 + 348 WP_069027033.1 hypothetical protein -
BEE12_RS22445 () 120111..120722 + 612 Protein_121 hypothetical protein -
BEE12_RS22450 () 120808..121518 + 711 WP_071941181.1 tyrosine-type recombinase/integrase -
BEE12_RS22460 () 122543..122896 - 354 Protein_123 IS3 family transposase ISYen3 Transposase
BEE12_RS22465 () 123048..123842 + 795 WP_069027035.1 ParA family protein -
BEE12_RS25150 () 123829..124080 + 252 WP_155763645.1 hypothetical protein -
BEE12_RS24400 () 124371..124517 - 147 WP_081325989.1 DUF4113 domain-containing protein -
BEE12_RS22475 () 124584..125731 + 1148 WP_088234235.1 IS3 family transposase ISEhe3 Transposase
BEE12_RS22480 () 125733..126542 - 810 WP_167620281.1 cache domain-containing protein -
BEE12_RS22485 () 127194..127418 - 225 Protein_129 XRE family transcriptional regulator -
BEE12_RS22490 () 128181..129404 + 1224 WP_069027036.1 cupin domain-containing protein -
BEE12_RS22495 () 129615..130328 - 714 Protein_131 IS30 family transposase -
BEE12_RS22500 () 130612..130818 + 207 Protein_132 DUF1281 domain-containing protein -
BEE12_RS24750 () 131649..131858 - 210 WP_081325990.1 hypothetical protein -
BEE12_RS22515 () 131907..132353 - 447 WP_069027039.1 hypothetical protein -
BEE12_RS22520 () 132346..134819 - 2474 Protein_135 F1 capsule-anchoring protein VF
BEE12_RS22525 () 134855..135588 - 734 Protein_136 Chaperone protein caf1M VF
BEE12_RS22530 () 136031..137026 + 996 WP_081325991.1 LysR family transcriptional regulator -
BEE12_RS22535 () 137163..137357 + 195 WP_069027041.1 hypothetical protein -
BEE12_RS22540 () 138174..140789 + 2616 WP_155763654.1 AIDA-I autotransporter VF
BEE12_RS22545 () 140862..140999 - 138 WP_109654037.1 transposase -
BEE12_RS25155 () 141039..141374 - 336 Protein_141 Tn3 family transposase TnpA_TnEc1 Transposase
BEE12_RS22555 () 141405..141775 - 371 Protein_142 transposase -
BEE12_RS25490 () 141840..142069 + 230 Protein_143 hypothetical protein -
BEE12_RS22560 () 142146..142559 - 414 WP_069027043.1 hypothetical protein -
BEE12_RS22565 () 143783..144823 + 1041 WP_069026984.1 CAP-Gly protein -
BEE12_RS22575 () 145323..145985 - 663 Protein_146 DUF421 domain-containing protein -
BEE12_RS22580 () 146245..146967 - 723 Protein_147 IS66 family transposase ISCro1 Transposase
BEE12_RS22585 () 146987..147334 - 348 WP_069027044.1 IS66 family transposase ISCro1 Transposase
BEE12_RS22590 () 147331..147807 - 477 WP_069027045.1 IS66 family transposase ISCro1 Transposase
BEE12_RS24760 () 148194..148613 - 420 Protein_150 DUF2931 family protein -
BEE12_RS25160 () 148610..149311 - 702 WP_155763647.1 hypothetical protein -
BEE12_RS25385 () 149980..150330 - 351 Protein_152 hypothetical protein -
BEE12_RS22610 () 150303..150653 - 351 WP_071941187.1 hypothetical protein -
BEE12_RS22615 () 151283..152650 - 1368 WP_069027050.1 Mandelamide hydrolase VF
BEE12_RS22620 () 152686..154373 - 1688 Protein_155 FAD-dependent oxidoreductase -
BEE12_RS24430 () 154874..155056 + 183 Protein_156 IS21 family transposase ISEc62 Transposase
BEE12_RS25390 () 155172..155453 + 282 Protein_157 Tn3 family transposase ISEc63 Transposase
BEE12_RS22625 () 155442..157453 + 2012 Protein_158 Tn3 family transposase ISEc63 Transposase
BEE12_RS22630 () 157678..159048 - 1371 WP_069027051.1 Toxin and drug export protein A VF
BEE12_RS22635 () 159052..160992 - 1941 WP_069027052.1 Macrolide export ATP-binding/permease protein MacB VF
BEE12_RS22640 () 160989..162173 - 1185 WP_069027053.1 efflux RND transporter periplasmic adaptor subunit -
BEE12_RS22650 () 162990..163223 - 234 Protein_162 KTSC domain-containing protein -
BEE12_RS22655 () 163220..163615 - 396 WP_069027055.1 hypothetical protein -
BEE12_RS22660 () 163755..163937 - 183 WP_069027056.1 hypothetical protein -
BEE12_RS22665 () 163930..164220 - 291 WP_069027057.1 hypothetical protein -
BEE12_RS22670 () 164342..164897 - 556 Protein_166 hypothetical protein -
BEE12_RS22675 () 164970..165182 - 213 WP_069027059.1 DUF2767 family protein -
BEE12_RS22680 () 166066..167001 - 936 WP_069027060.1 replication initiation protein -
BEE12_RS25170 () 167038..167439 + 402 WP_155763649.1 hypothetical protein -
BEE12_RS22685 () 168231..169222 + 992 Protein_170 2,3-diaminopropionate biosynthesis protein SbnA -
BEE12_RS22690 () 169215..170255 + 1041 WP_155763651.1 2,3-diaminopropionate biosynthesis protein SbnB -
BEE12_RS22695 () 170252..171241 + 990 WP_010260344.1 TauD/TfdA family dioxygenase -
BEE12_RS22700 () 171228..172964 + 1737 WP_069027061.1 Dapdiamide synthesis protein DdaD VF
BEE12_RS22705 () 172967..173692 + 726 WP_069027062.1 Linear gramicidin dehydrogenase LgrE VF
BEE12_RS22710 () 173714..174988 + 1275 WP_069027063.1 ATP-grasp domain-containing protein -
BEE12_RS22715 () 174999..176171 + 1173 WP_069027064.1 CoF synthetase -
BEE12_RS22720 () 176194..178017 + 1824 WP_069027065.1 Asparagine synthetase [glutamine-hydrolyzing] 1 VF
BEE12_RS22725 () 178027..178989 + 963 WP_069027066.1 hypothetical protein -
BEE12_RS22730 () 179095..179898 - 804 WP_069027067.1 thioredoxin domain-containing protein -
BEE12_RS22735 () 179970..185768 - 5799 WP_069027068.1 Multifunctional conjugation protein TraI Relaxase
BEE12_RS22740 () 185765..188386 - 2622 WP_069027069.1 Coupling protein TraD VF
BEE12_RS22745 () 188488..188847 - 360 WP_069027070.1 hypothetical protein -
BEE12_RS22750 () 189203..189454 - 252 WP_069027071.1 hypothetical protein -
BEE12_RS22755 () 189534..190265 - 732 WP_061704454.1 conjugal transfer protein TraT -
BEE12_RS22760 () 190397..190966 - 570 WP_069027072.1 hypothetical protein -
BEE12_RS22765 () 190991..191293 - 303 WP_155763653.1 hypothetical protein -
BEE12_RS22770 () 191323..194049 - 2727 WP_081325993.1 conjugal transfer mating pair stabilization protein TraG -
BEE12_RS22775 () 194042..195409 - 1368 WP_069027112.1 conjugal transfer protein TraH -
BEE12_RS22780 () 195544..196038 - 495 WP_069027074.1 hypothetical protein -
BEE12_RS22785 () 196076..196354 - 279 WP_069027075.1 hypothetical protein -
BEE12_RS22790 () 196386..197009 - 624 WP_069027076.1 F-type conjugal transfer protein TrbB -
BEE12_RS22795 () 196999..197211 - 213 WP_069027077.1 hypothetical protein -
BEE12_RS22800 () 197208..197660 - 453 WP_069027078.1 hypothetical protein -
BEE12_RS22805 () 197671..198468 - 798 WP_069027079.1 type-F conjugative transfer system pilin assembly protein TraF -
BEE12_RS22810 () 198465..200312 - 1848 WP_069027080.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
BEE12_RS22815 () 200309..200938 - 630 WP_069027081.1 type-F conjugative transfer system pilin assembly protein TrbC -
BEE12_RS22820 () 200948..201940 - 993 WP_069027082.1 conjugal transfer pilus assembly protein TraU -
BEE12_RS22825 () 201940..202278 - 339 WP_069027083.1 hypothetical protein -
BEE12_RS22830 () 202445..202825 - 381 WP_069027084.1 hypothetical protein -
BEE12_RS22835 () 202884..203591 - 708 WP_069027085.1 hypothetical protein -
BEE12_RS22840 () 203588..204175 - 588 WP_069027086.1 hypothetical protein -
BEE12_RS22845 () 204172..204456 - 285 WP_069027087.1 hypothetical protein -
BEE12_RS22850 () 204453..205076 - 624 WP_069027088.1 type-F conjugative transfer system protein TraW -
BEE12_RS22855 () 205073..205519 - 447 WP_069027089.1 type-F conjugative transfer system protein TrbI -
BEE12_RS22860 () 205534..208179 - 2646 WP_069027090.1 type IV secretion system protein TraC -
BEE12_RS22865 () 208169..208399 - 231 WP_069027091.1 hypothetical protein -
BEE12_RS22870 () 208399..208941 - 543 WP_069027092.1 type IV conjugative transfer system lipoprotein TraV -
BEE12_RS22875 () 209120..209299 - 180 WP_069027093.1 hypothetical protein -
BEE12_RS22880 () 209292..209756 - 465 WP_069027094.1 hypothetical protein -
BEE12_RS22885 () 209822..210226 - 405 WP_069027095.1 hypothetical protein -
BEE12_RS22890 () 210223..210738 - 516 WP_069027096.1 transcription/translation regulatory transformer protein RfaH -
BEE12_RS22895 () 210751..212139 - 1389 WP_069027097.1 F-type conjugal transfer pilus assembly protein TraB -
BEE12_RS22900 () 212136..212873 - 738 WP_069027098.1 F-type conjugal transfer protein TraK -
BEE12_RS22905 () 212878..213477 - 600 WP_069027099.1 type IV conjugative transfer system protein TraE -
BEE12_RS22910 () 213522..213824 - 303 WP_069027100.1 type IV conjugative transfer system protein TraL -
BEE12_RS22915 () 213832..214224 - 393 WP_069027101.1 conjugal transfer protein TraA -
BEE12_RS22920 () 214434..215038 + 605 Protein_217 hypothetical protein -
BEE12_RS22925 () 215551..215940 - 390 WP_069027102.1 conjugal transfer protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance