MGE detailed information
MGE type: IScluster/Tn MGE length: 11161 bp
Accession: NZ_CP016850 Location: 44478..55638 Organism: Pseudomonas sp. TMW 2.1634 Replicon: plasmid pL21564-1
Accession: NZ_CP016850 Location: 44478..55638 Organism: Pseudomonas sp. TMW 2.1634 Replicon: plasmid pL21564-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BFC21_RS27435 () | 39956..40318 | - | 363 | Protein_24 | conjugal transfer protein TraX | - |
| BFC21_RS26480 () | 40329..40985 | - | 657 | WP_120266771.1 | transglycosylase SLT domain-containing protein | - |
| BFC21_RS26485 () | 40996..41295 | - | 300 | WP_120266772.1 | conjugal transfer protein | - |
| BFC21_RS26490 () | 41306..42829 | - | 1524 | WP_120266801.1 | P-type conjugative transfer protein TrbL | - |
| BFC21_RS27365 () | 42829..43032 | - | 204 | WP_162939416.1 | hypothetical protein | - |
| BFC21_RS26495 () | 43046..43828 | - | 783 | WP_120266773.1 | P-type conjugative transfer protein TrbJ | - |
| BFC21_RS26500 () | 43844..44398 | - | 555 | WP_120266774.1 | hypothetical protein | - |
| BFC21_RS26505 () | 44478..47447 | - | 2970 | WP_019334889.1 | Tn3 family transposase | - |
| BFC21_RS26510 () | 47527..48153 | - | 627 | WP_019334890.1 | LysE family translocator | - |
| BFC21_RS26515 () | 48424..49839 | - | 1416 | WP_019334892.1 | glycosyltransferase family 39 protein | - |
| BFC21_RS26520 () | 49839..50825 | - | 987 | WP_100226690.1 | glycosyltransferase family 2 protein | - |
| BFC21_RS26525 () | 50806..51201 | - | 396 | WP_080034397.1 | GtrA family protein | - |
| BFC21_RS26530 () | 51577..52848 | - | 1272 | WP_023082049.1 | IS4-like element ISPa1635 family transposase | - |
| BFC21_RS26535 () | 53123..53398 | - | 276 | WP_016502317.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BFC21_RS26540 () | 53398..53670 | - | 273 | WP_016502318.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| BFC21_RS26545 () | 53684..54097 | - | 414 | WP_033901201.1 | hypothetical protein | - |
| BFC21_RS26550 () | 54104..54844 | - | 741 | WP_019334897.1 | DUF2807 domain-containing protein | - |
| BFC21_RS26555 () | 55075..55638 | + | 564 | WP_019334898.1 | recombinase family protein | - |
| BFC21_RS26560 () | 55592..56485 | - | 894 | WP_120266775.1 | hypothetical protein | - |
| BFC21_RS26565 () | 56491..56952 | - | 462 | WP_120266776.1 | conjugal transfer protein TrbH | - |
| BFC21_RS26570 () | 56952..57848 | - | 897 | WP_086799791.1 | P-type conjugative transfer protein TrbG | - |
| BFC21_RS26575 () | 57869..58600 | - | 732 | WP_120266777.1 | conjugal transfer protein TrbF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|