MGE detailed information
MGE type: Conjugative plasmid MGE length: 99718 bp
Accession: NZ_CP016850 Location: 1..99718 Organism: Pseudomonas sp. TMW 2.1634 Replicon: plasmid pL21564-1
Accession: NZ_CP016850 Location: 1..99718 Organism: Pseudomonas sp. TMW 2.1634 Replicon: plasmid pL21564-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BFC21_RS26360 () | 658..1311 | + | 654 | WP_120266752.1 | ABC transporter ATP-binding protein | - |
| BFC21_RS26365 () | 1361..2467 | + | 1107 | WP_120266753.1 | ABC transporter permease | - |
| BFC21_RS26370 () | 2508..3566 | + | 1059 | WP_120266754.1 | polysaccharide biosynthesis/export family protein | - |
| BFC21_RS26375 () | 3719..7180 | + | 3462 | WP_120266755.1 | HAD-IA family hydrolase | - |
| BFC21_RS26380 () | 7261..8937 | + | 1677 | WP_120266756.1 | hypothetical protein | - |
| BFC21_RS26385 () | 9025..9867 | + | 843 | WP_120266757.1 | 3-deoxy-8-phosphooctulonate synthase | - |
| BFC21_RS26390 () | 9878..11164 | + | 1287 | WP_120266758.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| BFC21_RS26395 () | 11213..12148 | - | 936 | WP_120266759.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| BFC21_RS26400 () | 12423..13370 | + | 948 | WP_120266799.1 | phosphotransferase | - |
| BFC21_RS26405 () | 13536..15560 | + | 2025 | WP_120266760.1 | capsular polysaccharide biosynthesis protein | - |
| BFC21_RS26410 () | 15518..16816 | + | 1299 | WP_120266761.1 | capsular biosynthesis protein | - |
| BFC21_RS26415 () | 16813..17598 | + | 786 | WP_120266762.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| BFC21_RS26420 () | 17606..19120 | + | 1515 | WP_177342619.1 | LTA synthase family protein | - |
| BFC21_RS26425 () | 19173..19715 | + | 543 | WP_120266800.1 | GNAT family N-acetyltransferase | - |
| BFC21_RS26430 () | 19712..21841 | + | 2130 | WP_120266764.1 | capsular polysaccharide biosynthesis protein | - |
| BFC21_RS26435 () | 21831..22874 | + | 1044 | WP_120266765.1 | phytanoyl-CoA dioxygenase family protein | - |
| BFC21_RS26440 () | 22926..24275 | - | 1350 | WP_120266766.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| BFC21_RS26445 () | 24286..31779 | - | 7494 | WP_120266767.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| BFC21_RS27360 () | 33099..33263 | + | 165 | WP_162939415.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| BFC21_RS26460 () | 33397..34250 | + | 854 | WP_086005488.1 | IS5 family transposase | - |
| BFC21_RS26465 () | 34753..37875 | - | 3123 | WP_120266768.1 | type I restriction endonuclease subunit R | - |
| BFC21_RS26470 () | 37872..38924 | - | 1053 | WP_120266769.1 | DUF1016 family protein | - |
| BFC21_RS26475 () | 38921..40072 | - | 1152 | WP_177342620.1 | restriction endonuclease subunit S | - |
| BFC21_RS27435 () | 39956..40318 | - | 363 | Protein_24 | conjugal transfer protein TraX | - |
| BFC21_RS26480 () | 40329..40985 | - | 657 | WP_120266771.1 | transglycosylase SLT domain-containing protein | - |
| BFC21_RS26485 () | 40996..41295 | - | 300 | WP_120266772.1 | conjugal transfer protein | - |
| BFC21_RS26490 () | 41306..42829 | - | 1524 | WP_120266801.1 | P-type conjugative transfer protein TrbL | - |
| BFC21_RS27365 () | 42829..43032 | - | 204 | WP_162939416.1 | hypothetical protein | - |
| BFC21_RS26495 () | 43046..43828 | - | 783 | WP_120266773.1 | P-type conjugative transfer protein TrbJ | - |
| BFC21_RS26500 () | 43844..44398 | - | 555 | WP_120266774.1 | hypothetical protein | - |
| BFC21_RS26505 () | 44478..47447 | - | 2970 | WP_019334889.1 | Tn3 family transposase | - |
| BFC21_RS26510 () | 47527..48153 | - | 627 | WP_019334890.1 | LysE family translocator | - |
| BFC21_RS26515 () | 48424..49839 | - | 1416 | WP_019334892.1 | glycosyltransferase family 39 protein | - |
| BFC21_RS26520 () | 49839..50825 | - | 987 | WP_100226690.1 | glycosyltransferase family 2 protein | - |
| BFC21_RS26525 () | 50806..51201 | - | 396 | WP_080034397.1 | GtrA family protein | - |
| BFC21_RS26530 () | 51577..52848 | - | 1272 | WP_023082049.1 | IS4-like element ISPa1635 family transposase | - |
| BFC21_RS26535 () | 53123..53398 | - | 276 | WP_016502317.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BFC21_RS26540 () | 53398..53670 | - | 273 | WP_016502318.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| BFC21_RS26545 () | 53684..54097 | - | 414 | WP_033901201.1 | hypothetical protein | - |
| BFC21_RS26550 () | 54104..54844 | - | 741 | WP_019334897.1 | DUF2807 domain-containing protein | - |
| BFC21_RS26555 () | 55075..55638 | + | 564 | WP_019334898.1 | recombinase family protein | - |
| BFC21_RS26560 () | 55592..56485 | - | 894 | WP_120266775.1 | hypothetical protein | - |
| BFC21_RS26565 () | 56491..56952 | - | 462 | WP_120266776.1 | conjugal transfer protein TrbH | - |
| BFC21_RS26570 () | 56952..57848 | - | 897 | WP_086799791.1 | P-type conjugative transfer protein TrbG | - |
| BFC21_RS26575 () | 57869..58600 | - | 732 | WP_120266777.1 | conjugal transfer protein TrbF | - |
| BFC21_RS26580 () | 58597..61149 | - | 2553 | WP_120266778.1 | conjugal transfer protein TrbE | - |
| BFC21_RS26585 () | 61146..61457 | - | 312 | WP_086799782.1 | conjugal transfer protein TrbD | - |
| BFC21_RS26590 () | 61463..61897 | - | 435 | WP_120266779.1 | TrbC/VirB2 family protein | - |
| BFC21_RS26595 () | 61909..62871 | - | 963 | WP_120266780.1 | P-type conjugative transfer ATPase TrbB | - |
| BFC21_RS26600 () | 63138..63512 | - | 375 | WP_120266781.1 | transcriptional regulator | - |
| BFC21_RS26605 () | 63766..64950 | + | 1185 | WP_086799771.1 | hypothetical protein | - |
| BFC21_RS26610 () | 66665..67190 | - | 526 | Protein_52 | hypothetical protein | - |
| BFC21_RS26615 () | 67622..67963 | + | 342 | WP_120266782.1 | hypothetical protein | - |
| BFC21_RS26620 () | 68049..68483 | + | 435 | WP_120266783.1 | antirestriction protein | - |
| BFC21_RS27370 () | 68535..69023 | + | 489 | WP_162939417.1 | hypothetical protein | - |
| BFC21_RS26625 () | 69099..69374 | + | 276 | WP_120266784.1 | transcriptional regulator | - |
| BFC21_RS26630 () | 69497..69760 | + | 264 | WP_120266802.1 | stable inheritance protein KleA | - |
| BFC21_RS26635 () | 69872..70207 | + | 336 | WP_120266803.1 | protein kleE | - |
| BFC21_RS27440 () | 70268..70429 | + | 162 | WP_177342618.1 | hypothetical protein | - |
| BFC21_RS26645 () | 70700..71002 | + | 303 | WP_120266786.1 | transcriptional regulator | - |
| BFC21_RS26650 () | 71011..71775 | + | 765 | WP_086799808.1 | ParA family protein | - |
| BFC21_RS26655 () | 71772..72812 | + | 1041 | WP_120266787.1 | ParB/RepB/Spo0J family partition protein | - |
| BFC21_RS26660 () | 73309..74514 | + | 1206 | WP_017735062.1 | chromate efflux transporter | - |
| BFC21_RS26665 () | 74525..74830 | + | 306 | WP_017335982.1 | PadR family transcriptional regulator | - |
| BFC21_RS26675 () | 75413..76900 | + | 1488 | WP_017735063.1 | SulP family inorganic anion transporter | - |
| BFC21_RS26680 () | 76912..77763 | + | 852 | WP_017735064.1 | universal stress protein | - |
| BFC21_RS26685 () | 77866..80859 | - | 2994 | WP_024015052.1 | Tn3 family transposase | - |
| BFC21_RS26690 () | 80863..81273 | - | 411 | WP_017335986.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| BFC21_RS26695 () | 81273..81512 | - | 240 | WP_017335987.1 | ribbon-helix-helix domain-containing protein | - |
| BFC21_RS26700 () | 81714..82631 | + | 918 | WP_017335988.1 | recombinase family protein | - |
| BFC21_RS26705 () | 82852..83682 | + | 831 | WP_120266788.1 | DUF3800 domain-containing protein | - |
| BFC21_RS26710 () | 83897..84250 | + | 354 | WP_120266789.1 | conjugal transfer protein TraO | - |
| BFC21_RS26715 () | 84353..84916 | + | 564 | WP_120266804.1 | hypothetical protein | - |
| BFC21_RS26720 () | 84978..85415 | - | 438 | WP_120266790.1 | conjugal transfer protein TraM | - |
| BFC21_RS26725 () | 85415..86143 | - | 729 | WP_120266791.1 | conjugal transfer protein TraL | - |
| BFC21_RS26730 () | 86143..86553 | - | 411 | WP_120266792.1 | TraK family protein | - |
| BFC21_RS26735 () | 86894..87271 | + | 378 | WP_120266793.1 | conjugal transfer transcriptional regulator TraJ | - |
| BFC21_RS26740 () | 87306..89822 | + | 2517 | WP_120266794.1 | relaxase/mobilization nuclease domain-containing protein | - |
| BFC21_RS26745 () | 89819..91762 | + | 1944 | WP_120266795.1 | type IV secretory system conjugative DNA transfer family protein | - |
| BFC21_RS26750 () | 91765..92310 | + | 546 | WP_120266805.1 | conjugative transfer signal peptidase TraF | - |
| BFC21_RS26755 () | 92315..94402 | + | 2088 | WP_120266796.1 | DNA topoisomerase 3 | - |
| BFC21_RS27375 () | 94405..94563 | + | 159 | WP_162939414.1 | hypothetical protein | - |
| BFC21_RS27445 () | 94579..96132 | + | 1554 | Protein_83 | DUF1738 domain-containing protein | - |
| BFC21_RS27385 () | 98385..98528 | + | 144 | WP_162939418.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|