MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 29138 bp
Accession: NZ_CP016834 Location: 1..29138 Organism: Xanthomonas fragariae isolate Fap29 Replicon: plasmid pFap29-1
Accession: NZ_CP016834 Location: 1..29138 Organism: Xanthomonas fragariae isolate Fap29 Replicon: plasmid pFap29-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
BER93_RS19385 () | 115..636 | - | 522 | WP_159088358.1 | hypothetical protein | - |
BER93_RS19390 () | 623..916 | - | 294 | WP_002805642.1 | hypothetical protein | - |
BER93_RS19395 () | 1125..1394 | - | 270 | WP_145954078.1 | hypothetical protein | - |
BER93_RS19400 () | 1381..2433 | - | 1053 | WP_065975495.1 | ParB/RepB/Spo0J family partition protein | - |
BER93_RS19405 () | 2426..3226 | - | 801 | WP_065975496.1 | ParA family protein | - |
BER93_RS19410 () | 3237..3551 | - | 315 | WP_065975497.1 | transcriptional regulator KorA | - |
BER93_RS19415 () | 4210..5085 | - | 876 | WP_002805689.1 | putative trfa-related protein | - |
BER93_RS19420 () | 5334..5939 | - | 606 | WP_065975498.1 | hypothetical protein | - |
BER93_RS19425 () | 6174..7082 | + | 909 | WP_002805094.1 | DUF3991 and TOPRIM domain-containing protein | - |
BER93_RS19430 () | 7123..7584 | + | 462 | WP_002805097.1 | hypothetical protein | - |
BER93_RS19435 () | 7751..8011 | + | 261 | WP_145954080.1 | hypothetical protein | - |
BER93_RS19440 () | 8062..8331 | + | 270 | WP_040762489.1 | TrbC/VirB2 family protein | - |
BER93_RS19445 () | 8345..8707 | + | 363 | WP_002805102.1 | Type IV secretion system protein virB3 | VF |
BER93_RS19450 () | 8707..11148 | + | 2442 | WP_065975499.1 | Type IV secretion system protein virB4 | VF |
BER93_RS19455 () | 11145..11855 | + | 711 | WP_002805311.1 | type IV secretion system protein | - |
BER93_RS19460 () | 11870..12163 | + | 294 | WP_002805313.1 | EexN family lipoprotein | - |
BER93_RS19465 () | 12175..13125 | + | 951 | WP_002805314.1 | Type IV secretion system protein VirB6 | VF |
BER93_RS19470 () | 13424..14302 | + | 879 | WP_002805316.1 | Type IV secretion system protein virB8 | VF |
BER93_RS19475 () | 14299..15108 | + | 810 | WP_082244228.1 | Type IV secretion system protein virB9 | VF |
BER93_RS19480 () | 15105..16319 | + | 1215 | WP_002805319.1 | Type IV secretion system protein virB10 | VF |
BER93_RS19485 () | 16319..17380 | + | 1062 | WP_002805320.1 | Type IV secretion system protein VirB11 | VF |
BER93_RS19490 () | 17394..19313 | + | 1920 | WP_065975500.1 | Conjugal transfer protein TraG | VF |
BER93_RS19495 () | 19326..21170 | + | 1845 | WP_065975501.1 | hypothetical protein | - |
BER93_RS19500 () | 21167..21790 | + | 624 | WP_002805358.1 | transglycosylase SLT domain-containing protein | - |
BER93_RS19505 () | 21787..22056 | + | 270 | WP_052032117.1 | DUF3717 domain-containing protein | - |
BER93_RS19510 () | 22217..22792 | - | 576 | WP_065975506.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
BER93_RS21620 () | 22834..23259 | - | 426 | WP_167699513.1 | antitoxin VbhA family protein | - |
BER93_RS19520 () | 23738..24037 | + | 300 | WP_002805369.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
BER93_RS19525 () | 24024..24317 | + | 294 | WP_002805372.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
BER93_RS22660 () | 24395..24571 | + | 177 | WP_156775376.1 | hypothetical protein | - |
BER93_RS19530 () | 24568..24792 | - | 225 | WP_002805375.1 | hypothetical protein | - |
BER93_RS19535 () | 25013..25765 | + | 753 | WP_065975503.1 | hypothetical protein | - |
BER93_RS19545 () | 26269..26868 | - | 600 | WP_065975504.1 | hypothetical protein | - |
BER93_RS19550 () | 27526..28545 | - | 1020 | WP_052032118.1 | hypothetical protein | Relaxase |
BER93_RS19555 () | 28532..29083 | - | 552 | WP_065975505.1 | hypothetical protein | Relaxase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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