MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 17637 bp
Accession: NZ_CP016833 Location: 1989323..2006959 Organism: Xanthomonas fragariae isolate Fap29 Replicon: chromosome
Accession: NZ_CP016833 Location: 1989323..2006959 Organism: Xanthomonas fragariae isolate Fap29 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BER93_RS09060 () | 1985527..1986420 | + | 894 | WP_002805770.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| BER93_RS09065 () | 1986574..1986861 | + | 288 | WP_108772763.1 | cation:proton antiporter | - |
| BER93_RS22150 () | 1986967..1987613 | + | 647 | Protein_1818 | transposase | - |
| BER93_RS09080 () | 1987640..1988564 | - | 925 | Protein_1819 | IS3 family transposase | - |
| BER93_RS09085 () | 1988628..1989722 | + | 1095 | Protein_1820 | IS5 family transposase | - |
| BER93_RS09090 () | 1989866..1991235 | + | 1370 | Protein_1821 | IS5 family transposase IS1478 | Transposase |
| BER93_RS09095 () | 1991595..1991915 | - | 321 | WP_002805766.1 | DUF1244 domain-containing protein | - |
| BER93_RS09100 () | 1991965..1992849 | + | 885 | WP_002805762.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| BER93_RS09105 () | 1992953..1994410 | + | 1458 | WP_002805758.1 | IMP dehydrogenase | - |
| BER93_RS09110 () | 1994536..1996101 | + | 1566 | WP_002805756.1 | glutamine-hydrolyzing GMP synthase | - |
| BER93_RS09115 () | 1996409..1997620 | + | 1212 | WP_002805754.1 | hypothetical protein ; Integrase | Integrase |
| BER93_RS09120 () | 1997704..1997961 | - | 258 | WP_002805752.1 | AlpA family phage regulatory protein | - |
| BER93_RS09125 () | 1998153..1999520 | + | 1368 | WP_065975473.1 | IS5 family transposase IS1478 | Transposase |
| BER93_RS09130 () | 1999594..2000598 | - | 1005 | WP_002805744.1 | hypothetical protein | - |
| BER93_RS09135 () | 2000680..2000913 | + | 234 | WP_002805742.1 | hypothetical protein | - |
| BER93_RS09140 () | 2000917..2001795 | + | 879 | WP_002805739.1 | helicase RepA family protein | - |
| BER93_RS09145 () | 2001767..2002654 | + | 888 | WP_172404498.1 | replication protein C | - |
| BER93_RS09150 () | 2003316..2003597 | + | 282 | WP_002805735.1 | TraK family protein | - |
| BER93_RS09155 () | 2004009..2004263 | + | 255 | WP_002805732.1 | Arc family DNA-binding protein | Antitoxin Detail |
| BER93_RS09160 () | 2004260..2004679 | + | 420 | WP_002805728.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BER93_RS09165 () | 2004836..2005450 | + | 615 | WP_040762517.1 | P-type conjugative transfer protein TrbJ | - |
| BER93_RS09170 () | 2005536..2005778 | + | 243 | Protein_1837 | IS3 family transposase ISXac3 | Transposase |
| BER93_RS09175 () | 2005896..2007263 | + | 1368 | WP_065975195.1 | IS5 family transposase | - |
| BER93_RS09180 () | 2007286..2008191 | + | 906 | Protein_1839 | IS3 family transposase | - |
| BER93_RS09185 () | 2008436..2009811 | - | 1376 | Protein_1840 | IS5 family transposase | - |
| BER93_RS22155 () | 2010216..2011064 | - | 849 | WP_145954058.1 | hypothetical protein | - |
| BER93_RS20715 () | 2011933..2011934 | - | 2 | WP_088056830.1 | IS5 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|