MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 50413 bp
Accession: NZ_CP016757 Location: 1238543..1288955 Organism: Cloacibacillus porcorum strain CL-84 (T) Replicon: chromosome
Accession: NZ_CP016757 Location: 1238543..1288955 Organism: Cloacibacillus porcorum strain CL-84 (T) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BED41_RS05585 () | 1233784..1234791 | - | 1008 | WP_066743910.1 | TRAP transporter substrate-binding protein | - |
| BED41_RS05590 () | 1234964..1235776 | - | 813 | WP_066743912.1 | fumarylacetoacetate hydrolase family protein | - |
| BED41_RS05595 () | 1236047..1237570 | + | 1524 | WP_066743914.1 | CoA-acylating methylmalonate-semialdehyde dehydrogenase | - |
| BED41_RS05600 () | 1237774..1238679 | + | 906 | WP_066743916.1 | ribokinase | - |
| BED41_RS05605 () | 1238973..1239449 | + | 477 | WP_066743917.1 | NfeD family protein | - |
| BED41_RS05610 () | 1239450..1240358 | + | 909 | WP_066743918.1 | SPFH/Band 7/PHB domain protein | - |
| BED41_RS16615 () | 1241748..1243073 | + | 1326 | WP_168160234.1 | Ig-like domain-containing protein | - |
| BED41_RS05620 () | 1243140..1244258 | - | 1119 | WP_066743920.1 | nucleotidyltransferase | - |
| BED41_RS16105 () | 1244358..1244483 | - | 126 | WP_084002275.1 | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | - |
| BED41_RS05625 () | 1245023..1247254 | + | 2232 | WP_066749006.1 | formate C-acetyltransferase | - |
| BED41_RS05630 () | 1247256..1247969 | + | 714 | WP_066743922.1 | pyruvate formate lyase-activating protein | - |
| BED41_RS05635 () | 1248059..1248532 | + | 474 | WP_157102272.1 | SsrA-binding protein SmpB | - |
| BED41_RS05645 () | 1249173..1250330 | + | 1158 | WP_066743926.1 | Prophage integrase IntS ; Integrase | Integrase |
| BED41_RS05650 () | 1250493..1251557 | - | 1065 | WP_066743928.1 | DNA cytosine methyltransferase | - |
| BED41_RS05655 () | 1251621..1253516 | - | 1896 | WP_066743929.1 | ATP-binding protein | - |
| BED41_RS05660 () | 1253586..1254041 | - | 456 | WP_066743930.1 | DNA mismatch endonuclease Vsr | - |
| BED41_RS05670 () | 1254679..1255920 | - | 1242 | WP_066742107.1 | IS256 family transposase ISCth4 | Transposase |
| BED41_RS05675 () | 1256278..1256598 | - | 321 | WP_066743933.1 | hypothetical protein | - |
| BED41_RS05680 () | 1256769..1257557 | - | 789 | WP_066743935.1 | hypothetical protein | - |
| BED41_RS05685 () | 1257596..1257934 | - | 339 | WP_066743937.1 | hypothetical protein | - |
| BED41_RS16410 () | 1258033..1258488 | - | 456 | WP_157102273.1 | hypothetical protein | - |
| BED41_RS05690 () | 1258524..1258949 | - | 426 | WP_066743939.1 | helix-turn-helix domain-containing protein | - |
| BED41_RS05700 () | 1259400..1259582 | + | 183 | WP_066743943.1 | hypothetical protein | - |
| BED41_RS05705 () | 1259589..1259855 | + | 267 | WP_066743945.1 | helix-turn-helix transcriptional regulator | - |
| BED41_RS05710 () | 1260017..1260271 | + | 255 | WP_157102274.1 | hypothetical protein | - |
| BED41_RS05715 () | 1260255..1260734 | + | 480 | WP_168160235.1 | sigma-70 family RNA polymerase sigma factor | - |
| BED41_RS05720 () | 1260957..1261241 | - | 285 | WP_066743951.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| BED41_RS05725 () | 1261234..1261518 | - | 285 | WP_066743954.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BED41_RS05730 () | 1261616..1262245 | + | 630 | WP_066743959.1 | terminase small subunit | - |
| BED41_RS05735 () | 1262238..1263047 | + | 810 | WP_066743960.1 | DEAD/DEAH box helicase family protein | - |
| BED41_RS05740 () | 1263014..1263598 | + | 585 | WP_066743962.1 | hypothetical protein | - |
| BED41_RS05745 () | 1263660..1263872 | + | 213 | WP_066743964.1 | hypothetical protein | - |
| BED41_RS05750 () | 1264210..1264431 | - | 222 | WP_066743966.1 | hypothetical protein | - |
| BED41_RS05755 () | 1264680..1266218 | + | 1539 | WP_066743968.1 | glutamine-hydrolyzing GMP synthase | - |
| BED41_RS05760 () | 1266429..1266962 | - | 534 | WP_019541686.1 | helix-turn-helix domain-containing protein | - |
| BED41_RS05765 () | 1267152..1267340 | + | 189 | WP_016412724.1 | hypothetical protein | - |
| BED41_RS05770 () | 1267341..1268417 | + | 1077 | WP_019541685.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| BED41_RS05775 () | 1268417..1268737 | + | 321 | WP_019541684.1 | hypothetical protein | - |
| BED41_RS05780 () | 1268745..1269899 | + | 1155 | WP_031583915.1 | helicase RepA family protein | - |
| BED41_RS05785 () | 1270220..1271563 | + | 1344 | WP_036376036.1 | plasmid recombination protein | - |
| BED41_RS05790 () | 1272072..1273991 | + | 1920 | WP_066743970.1 | Tetracycline resistance protein TetO | VF |
| BED41_RS05795 () | 1274523..1277660 | + | 3138 | WP_168160236.1 | Autoinducer 2 sensor kinase/phosphatase LuxQ | VF |
| BED41_RS05800 () | 1277884..1278444 | + | 561 | WP_066743979.1 | PAS domain-containing protein | - |
| BED41_RS05805 () | 1278572..1279813 | + | 1242 | WP_066742107.1 | IS256 family transposase ISCth4 | Transposase |
| BED41_RS05810 () | 1279966..1280874 | - | 909 | WP_157102226.1 | IS3 family transposase ISErh1 | Transposase |
| BED41_RS05815 () | 1280841..1281206 | - | 366 | WP_066742226.1 | helix-turn-helix domain-containing protein | - |
| BED41_RS05820 () | 1281369..1283207 | + | 1839 | WP_066743981.1 | Autoinducer 2 sensor kinase/phosphatase LuxQ | VF |
| BED41_RS05825 () | 1283271..1284092 | + | 822 | WP_066743982.1 | DNA-formamidopyrimidine glycosylase | - |
| BED41_RS05830 () | 1284240..1285367 | + | 1128 | WP_066743992.1 | AI-2E family transporter | - |
| BED41_RS05835 () | 1285360..1286001 | + | 642 | WP_084002279.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobB | - |
| BED41_RS05840 () | 1286135..1288096 | + | 1962 | WP_066743994.1 | sodium-translocating pyrophosphatase | - |
| BED41_RS05845 () | 1288319..1290061 | + | 1743 | WP_066743996.1 | DNA primase | - |
| BED41_RS05850 () | 1290058..1291401 | + | 1344 | WP_066743998.1 | RNA polymerase sigma factor RpoD | - |
| BED41_RS05855 () | 1291521..1291793 | + | 273 | WP_066749012.1 | RNA-binding S4 domain-containing protein | - |
| BED41_RS05860 () | 1291835..1293112 | + | 1278 | WP_066744000.1 | phosphopyruvate hydratase | - |
| BED41_RS05865 () | 1293126..1293758 | + | 633 | WP_066744002.1 | redox-sensing transcriptional repressor Rex | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|