MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92710 bp
Accession: NZ_CP016699 Location: 1..92710 Organism: Lactococcus lactis subsp. lactis strain 275 Replicon: plasmid p275A
Accession: NZ_CP016699 Location: 1..92710 Organism: Lactococcus lactis subsp. lactis strain 275 Replicon: plasmid p275A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL275_RS12660 () | 1..1353 | + | 1353 | WP_014011582.1 | replication initiation protein | - |
| LL275_RS12665 () | 1698..2588 | + | 891 | WP_081144385.1 | IS982 family transposase ISLla2 | Transposase |
| LL275_RS12670 () | 2873..3106 | + | 234 | WP_014573541.1 | hypothetical protein | - |
| LL275_RS12675 () | 3116..3874 | + | 759 | WP_023349312.1 | Sporulation initiation inhibitor protein Soj | VF |
| LL275_RS12680 () | 3878..4606 | + | 729 | WP_014573539.1 | ParB N-terminal domain-containing protein | - |
| LL275_RS12685 () | 4636..4986 | - | 351 | WP_014011586.1 | hypothetical protein | - |
| LL275_RS12690 () | 4976..6442 | - | 1467 | WP_081144386.1 | Y-family DNA polymerase | - |
| LL275_RS12700 () | 7082..7381 | + | 300 | Protein_7 | type I restriction endonuclease subunit R | - |
| LL275_RS14240 () | 7400..7761 | - | 362 | Protein_8 | transposase | - |
| LL275_RS12720 () | 9476..9676 | + | 201 | WP_014570881.1 | hypothetical protein | - |
| LL275_RS12725 () | 9807..10007 | + | 201 | WP_003132324.1 | cold shock domain-containing protein | - |
| LL275_RS12730 () | 10287..10487 | + | 201 | WP_012898583.1 | cold-shock protein | - |
| LL275_RS12735 () | 11002..11241 | + | 240 | WP_003131011.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| LL275_RS12740 () | 11271..11831 | + | 561 | WP_003131013.1 | alkaline shock response membrane anchor protein AmaP | - |
| LL275_RS12745 () | 11841..12029 | + | 189 | WP_015425997.1 | DUF2273 domain-containing protein | - |
| LL275_RS12750 () | 12050..12601 | + | 552 | WP_015425998.1 | Asp23/Gls24 family envelope stress response protein | - |
| LL275_RS12755 () | 12678..13031 | - | 354 | Protein_17 | IS3 family transposase IS981 | Transposase |
| LL275_RS12760 () | 13116..13774 | - | 659 | Protein_18 | IS6 family transposase IS1297 | Transposase |
| LL275_RS12765 () | 14031..14573 | - | 543 | WP_081144389.1 | site-specific integrase | - |
| LL275_RS12770 () | 14602..14898 | - | 297 | WP_081144390.1 | DUF4298 domain-containing protein | - |
| LL275_RS12775 () | 15031..15870 | - | 840 | Protein_21 | IS982 family transposase ISLll1 | Transposase |
| LL275_RS12790 () | 17475..18362 | + | 888 | WP_081144391.1 | GRP family sugar transporter | - |
| LL275_RS12795 () | 18436..19044 | - | 609 | Protein_24 | D-alanyl-D-alanine carboxypeptidase | - |
| LL275_RS12800 () | 19062..19508 | - | 447 | Protein_25 | IS982 family transposase ISLll1 | Transposase |
| LL275_RS12805 () | 19533..19958 | - | 426 | Protein_26 | IS982 family transposase ISLll1 | Transposase |
| LL275_RS12810 () | 20034..20789 | - | 756 | WP_081144392.1 | iron export ABC transporter permease subunit FetB | - |
| LL275_RS12815 () | 20786..21436 | - | 651 | WP_010383508.1 | putative iron export ATP-binding protein FetA | VF |
| LL275_RS12820 () | 21585..21737 | + | 153 | Protein_29 | 23S rRNA (uracil-5-)-methyltransferase RumA | - |
| LL275_RS12825 () | 21792..22433 | - | 642 | WP_081144393.1 | IS6 family transposase IS1297 | Transposase |
| LL275_RS12830 () | 22653..22883 | + | 231 | WP_031297153.1 | ComC/BlpC family leader-containing pheromone/bacteriocin | - |
| LL275_RS12835 () | 22893..23255 | + | 363 | WP_011669076.1 | hypothetical protein | - |
| LL275_RS12840 () | 23442..23711 | + | 270 | WP_023349276.1 | hypothetical protein | - |
| LL275_RS12845 () | 23841..24431 | + | 591 | WP_023349277.1 | Transcriptional regulator AcuR | VF |
| LL275_RS14415 () | 24505..24669 | + | 165 | WP_153915025.1 | hypothetical protein | - |
| LL275_RS12855 () | 24696..25319 | + | 624 | WP_023349278.1 | cysteine hydrolase | - |
| LL275_RS12860 () | 25457..26806 | + | 1350 | WP_081144394.1 | FAD-dependent oxidoreductase | - |
| LL275_RS12865 () | 27194..28458 | - | 1265 | Protein_38 | IS3 family transposase ISLla3 | Transposase |
| LL275_RS12870 () | 28516..29663 | - | 1148 | Protein_39 | IS3 family transposase IS1069 | Transposase |
| LL275_RS12880 () | 29758..30378 | - | 621 | WP_081144396.1 | IS6 family transposase IS1297 | Transposase |
| LL275_RS14265 () | 30452..30553 | - | 102 | Protein_41 | IS982 family transposase | - |
| LL275_RS12885 () | 30782..31786 | + | 1005 | WP_081144397.1 | galactose mutarotase | - |
| LL275_RS12890 () | 31825..36834 | + | 5010 | WP_081144398.1 | InlB B-repeat-containing protein | - |
| LL275_RS12895 () | 37122..37634 | - | 513 | Protein_44 | IS5 family transposase IS1194 | Transposase |
| LL275_RS12900 () | 37636..37881 | - | 246 | Protein_45 | hypothetical protein | - |
| LL275_RS14270 () | 37929..39076 | + | 1148 | Protein_46 | IS3 family transposase | - |
| LL275_RS12920 () | 39523..40419 | - | 897 | WP_012477748.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LL275_RS12925 () | 40416..41279 | - | 864 | WP_012477749.1 | AbiEi | Antitoxin Detail |
| LL275_RS12930 () | 41632..42213 | - | 582 | WP_081144401.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| LL275_RS12935 () | 42485..43321 | - | 837 | WP_023349284.1 | AraC family transcriptional regulator | - |
| LL275_RS12940 () | 43609..43944 | + | 336 | WP_011915238.1 | bacteriocin immunity protein | - |
| LL275_RS12945 () | 44081..44395 | + | 315 | Protein_52 | Nif3-like dinuclear metal center hexameric protein | - |
| LL275_RS12950 () | 44435..44800 | - | 366 | WP_021166316.1 | hypothetical protein | - |
| LL275_RS12955 () | 44925..45176 | - | 252 | Protein_54 | HAD hydrolase family protein | - |
| LL275_RS14420 () | 45104..45271 | - | 168 | WP_161487267.1 | hypothetical protein | - |
| LL275_RS12960 () | 45373..46422 | - | 1050 | WP_081144402.1 | DUF389 domain-containing protein | - |
| LL275_RS12965 () | 46700..46837 | - | 138 | Protein_57 | DUF898 family protein | - |
| LL275_RS12975 () | 47686..47988 | - | 303 | WP_010890674.1 | hypothetical protein | - |
| LL275_RS12980 () | 47981..48256 | - | 276 | WP_081144403.1 | DUF2089 family protein | - |
| LL275_RS12985 () | 48513..48830 | + | 318 | WP_042748583.1 | PadR family transcriptional regulator | - |
| LL275_RS12990 () | 48827..49654 | + | 828 | WP_011834702.1 | hypothetical protein | - |
| LL275_RS12995 () | 49730..50503 | + | 774 | WP_040087662.1 | hypothetical protein | - |
| LL275_RS13000 () | 50634..50873 | + | 240 | WP_010276787.1 | hypothetical protein | - |
| LL275_RS13005 () | 50870..51520 | + | 651 | WP_010383508.1 | putative iron export ATP-binding protein FetA | VF |
| LL275_RS13010 () | 51517..52272 | + | 756 | WP_081144392.1 | iron export ABC transporter permease subunit FetB | - |
| LL275_RS13015 () | 52426..53106 | + | 681 | WP_081144404.1 | IS6 family transposase ISS1RS | Transposase |
| LL275_RS14285 () | 53154..53312 | + | 159 | Protein_68 | IS5/IS1182 family transposase | - |
| LL275_RS13020 () | 53475..53897 | - | 423 | WP_003108064.1 | cupin domain-containing protein | - |
| LL275_RS13025 () | 54113..55099 | + | 987 | WP_081144405.1 | IS30 family transposase IS6770 | Transposase |
| LL275_RS13030 () | 55267..55476 | + | 210 | WP_047686044.1 | hypothetical protein | - |
| LL275_RS13035 () | 55649..55933 | - | 285 | WP_032398590.1 | hypothetical protein | - |
| LL275_RS13040 () | 55938..56690 | - | 753 | WP_032398591.1 | ABC transporter permease | - |
| LL275_RS13045 () | 56687..57409 | - | 723 | WP_095348744.1 | ABC transporter permease | - |
| LL275_RS13050 () | 57406..58161 | - | 756 | WP_081144406.1 | putative multidrug ABC transporter ATP-binding protein YbhF | VF |
| LL275_RS13055 () | 58311..59015 | + | 705 | WP_047686051.1 | Sensory transduction protein regX3 | VF |
| LL275_RS13060 () | 59017..60414 | + | 1398 | WP_081144407.1 | HAMP domain-containing histidine kinase | - |
| LL275_RS13065 () | 60718..61398 | - | 681 | WP_010890648.1 | IS6 family transposase ISS1RS | Transposase |
| LL275_RS13070 () | 61704..62747 | + | 1044 | WP_081144408.1 | hypothetical protein | - |
| LL275_RS13075 () | 63750..64745 | + | 996 | WP_081144417.1 | AAA family ATPase | - |
| LL275_RS13080 () | 64729..66555 | + | 1827 | WP_081144409.1 | hypothetical protein | - |
| LL275_RS13085 () | 67049..67729 | - | 681 | WP_010890648.1 | IS6 family transposase ISS1RS | Transposase |
| LL275_RS13090 () | 67884..68219 | + | 336 | WP_014570314.1 | hypothetical protein | - |
| LL275_RS13095 () | 68547..69044 | - | 498 | WP_080692379.1 | GNAT family N-acetyltransferase | - |
| LL275_RS13100 () | 69363..69497 | + | 135 | Protein_85 | helix-turn-helix domain-containing protein | - |
| LL275_RS13105 () | 69553..70569 | + | 1017 | WP_081144410.1 | hypothetical protein | - |
| LL275_RS13110 () | 70596..77612 | + | 7017 | WP_161487268.1 | Levansucrase | VF |
| LL275_RS13120 () | 77624..78061 | + | 438 | WP_042748483.1 | MarR family transcriptional regulator | - |
| LL275_RS13125 () | 78325..78750 | + | 426 | Protein_89 | acyltransferase | - |
| LL275_RS13130 () | 78910..79476 | + | 567 | WP_081144411.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| LL275_RS14290 () | 79634..79726 | - | 93 | WP_127005302.1 | type I toxin-antitoxin system Fst family toxin | - |
| LL275_RS13135 () | 79859..80209 | - | 351 | WP_081144412.1 | hypothetical protein | - |
| LL275_RS13140 () | 80516..82621 | - | 2106 | WP_081144413.1 | copper-translocating P-type ATPase | - |
| LL275_RS13145 () | 83030..85273 | + | 2244 | WP_042749095.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| LL275_RS13150 () | 85281..85886 | + | 606 | WP_025016575.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| LL275_RS13155 () | 86241..86746 | + | 506 | Protein_96 | ImmA/IrrE family metallo-endopeptidase | - |
| LL275_RS13160 () | 86746..87036 | + | 291 | WP_081144419.1 | hypothetical protein | - |
| LL275_RS13165 () | 87250..87618 | + | 369 | WP_014570288.1 | hypothetical protein | Relaxase |
| LL275_RS13170 () | 87624..89141 | + | 1518 | WP_081144414.1 | hypothetical protein | Relaxase |
| LL275_RS13175 () | 89483..89713 | - | 231 | WP_031559172.1 | hypothetical protein | - |
| LL275_RS13180 () | 89722..90197 | - | 476 | Protein_101 | RepB family protein | - |
| LL275_RS13185 () | 90190..90384 | - | 195 | Protein_102 | RepB protein | - |
| LL275_RS13190 () | 90464..91531 | + | 1068 | Protein_103 | IS3 family transposase IS-LL6 | Transposase |
| LL275_RS13195 () | 91570..92187 | + | 618 | WP_081144415.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|