MGE detailed information
MGE type: Prophage MGE length: 110060 bp
Accession: NZ_CP016625 Location: 3100943..3211002 Organism: Escherichia coli O157:H7 strain FRIK944 Replicon: chromosome
Accession: NZ_CP016625 Location: 3100943..3211002 Organism: Escherichia coli O157:H7 strain FRIK944 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9L45_RS16420 () | 3096317..3097036 | - | 720 | WP_000598641.1 | two-component system response regulator BtsR | - |
| A9L45_RS16425 () | 3097033..3098718 | - | 1686 | WP_001301761.1 | two-component regulatory system sensor histidine kinase BtsS | - |
| A9L45_RS16430 () | 3099233..3099481 | + | 249 | WP_001261939.1 | DinI-like family protein | - |
| A9L45_RS16435 () | 3099643..3100284 | - | 642 | WP_001143784.1 | DUF1076 domain-containing protein | - |
| A9L45_RS31875 () | 3100366..3100782 | - | 417 | WP_072142879.1 | DUF1076 domain-containing protein | - |
| A9L45_RS16440 () | 3100943..3101212 | - | 270 | WP_001023396.1 | phage tail fiber C-terminal domain-containing protein | - |
| A9L45_RS16445 () | 3101214..3102383 | - | 1170 | WP_000268879.1 | prophage tail fiber N-terminal domain-containing protein | - |
| A9L45_RS16450 () | 3102448..3103047 | - | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| A9L45_RS16455 () | 3103115..3106594 | - | 3480 | WP_015994252.1 | host specificity protein J | - |
| A9L45_RS16460 () | 3106854..3107486 | - | 633 | WP_149025382.1 | tail assembly protein | - |
| A9L45_RS16465 () | 3107432..3108169 | - | 738 | WP_000967271.1 | C40 family peptidase | - |
| A9L45_RS16470 () | 3108223..3109146 | - | 924 | WP_001416667.1 | phage antirepressor Ant | - |
| A9L45_RS16475 () | 3109217..3109390 | - | 174 | WP_001154345.1 | Arc family DNA-binding protein | - |
| A9L45_RS16480 () | 3109498..3109818 | + | 321 | WP_001302649.1 | Arc family DNA-binding protein | - |
| A9L45_RS16485 () | 3109835..3110533 | - | 699 | WP_001152183.1 | phage minor tail protein L | - |
| A9L45_RS16490 () | 3110533..3110874 | - | 342 | WP_000807954.1 | phage tail protein | - |
| A9L45_RS16495 () | 3110867..3114109 | - | 3243 | WP_000212827.1 | phage tail tape measure protein | - |
| A9L45_RS16500 () | 3114157..3114366 | - | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| A9L45_RS16505 () | 3114462..3114836 | - | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| A9L45_RS16510 () | 3114851..3115567 | - | 717 | WP_001275464.1 | immunoglobulin domain-containing protein | - |
| A9L45_RS16515 () | 3115633..3115977 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| A9L45_RS16520 () | 3115974..3116420 | - | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| A9L45_RS16525 () | 3116417..3116767 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| A9L45_RS16530 () | 3116778..3117104 | - | 327 | WP_000125984.1 | head-tail connector protein | - |
| A9L45_RS31880 () | 3117101..3119680 | - | 2580 | Protein_3171 | phage portal protein | - |
| A9L45_RS16545 () | 3119626..3119847 | - | 222 | WP_001063099.1 | hypothetical protein | - |
| A9L45_RS16550 () | 3119892..3121829 | - | 1938 | WP_000172999.1 | phage major capsid protein | - |
| A9L45_RS16555 () | 3121893..3123554 | - | 1662 | WP_001301491.1 | terminase large subunit | - |
| A9L45_RS16560 () | 3123551..3124114 | - | 564 | WP_000958387.1 | terminase small subunit | - |
| A9L45_RS16565 () | 3124403..3124768 | - | 366 | WP_001303046.1 | HNH endonuclease | - |
| A9L45_RS31885 () | 3124810..3125034 | + | 225 | WP_000074669.1 | YlcI/YnfO family protein | - |
| A9L45_RS16570 () | 3125116..3125430 | - | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| A9L45_RS34890 () | 3125957..3126142 | - | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| A9L45_RS16580 () | 3126359..3126856 | - | 498 | WP_000075112.1 | lysozyme RrrD | - |
| A9L45_RS16585 () | 3126856..3127071 | - | 216 | WP_024164617.1 | class II holin family protein | - |
| A9L45_RS16590 () | 3127510..3129360 | - | 1851 | WP_024748518.1 | SASA family carbohydrate esterase | - |
| A9L45_RS16595 () | 3129852..3130910 | - | 1059 | WP_000483497.1 | site-specific DNA-methyltransferase | - |
| A9L45_RS16600 () | 3131061..3131258 | - | 198 | WP_000917735.1 | hypothetical protein | - |
| A9L45_RS16605 () | 3131485..3132306 | - | 822 | WP_000762904.1 | antitermination protein | - |
| A9L45_RS16610 () | 3132303..3132677 | - | 375 | WP_000904137.1 | RusA family crossover junction endodeoxyribonuclease | - |
| A9L45_RS31905 () | 3132690..3133739 | - | 1050 | Protein_3187 | DUF968 domain-containing protein | - |
| A9L45_RS31910 () | 3133741..3134019 | - | 279 | WP_001304183.1 | hypothetical protein | - |
| A9L45_RS35455 () | 3134085..3134252 | - | 168 | WP_000998188.1 | hypothetical protein | - |
| A9L45_RS16630 () | 3134549..3134704 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 3134716..3134774 | + | 59 | - | - | Antitoxin Detail |
| A9L45_RS33720 () | 3134950..3135054 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| A9L45_RS16635 () | 3135170..3135532 | - | 363 | WP_000610379.1 | DUF551 domain-containing protein | - |
| A9L45_RS16640 () | 3135529..3135900 | - | 372 | WP_000137941.1 | hypothetical protein | - |
| A9L45_RS16645 () | 3135936..3136148 | - | 213 | WP_000063625.1 | hypothetical protein | - |
| A9L45_RS16650 () | 3136197..3136553 | - | 357 | WP_001302146.1 | hypothetical protein | - |
| A9L45_RS16655 () | 3136610..3137005 | - | 396 | WP_001118161.1 | DUF977 family protein | - |
| A9L45_RS16660 () | 3137021..3137791 | - | 771 | WP_000450888.1 | DUF1627 domain-containing protein | - |
| A9L45_RS16665 () | 3137821..3138561 | - | 741 | WP_000790456.1 | ATP-binding protein | - |
| A9L45_RS16670 () | 3138568..3139521 | - | 954 | WP_000095667.1 | helix-turn-helix domain-containing protein | - |
| A9L45_RS16675 () | 3139544..3139969 | - | 426 | WP_000693888.1 | Rha family transcriptional regulator | - |
| A9L45_RS31920 () | 3139953..3140228 | - | 276 | WP_024213789.1 | helix-turn-helix domain-containing protein | - |
| A9L45_RS16680 () | 3140331..3140720 | + | 390 | WP_000367559.1 | helix-turn-helix domain-containing protein | - |
| A9L45_RS16685 () | 3140890..3141042 | + | 153 | WP_000380314.1 | DUF1391 family protein | - |
| A9L45_RS16690 () | 3141530..3141718 | + | 189 | WP_000450222.1 | cell division inhibitor | - |
| A9L45_RS16695 () | 3141715..3141903 | + | 189 | WP_000092782.1 | DUF1482 family protein | - |
| A9L45_RS16700 () | 3141996..3144440 | + | 2445 | WP_000102181.1 | exonuclease | - |
| A9L45_RS16705 () | 3144505..3144753 | + | 249 | WP_000113189.1 | excisionase | - |
| A9L45_RS16710 () | 3144731..3145861 | + | 1131 | WP_001500821.1 | hypothetical protein ; Integrase | Integrase |
| A9L45_RS31930 () | 3145907..3146032 | - | 126 | Protein_3209 | outer membrane protein OmpW | - |
| A9L45_RS31940 () | 3146767..3147002 | - | 236 | Protein_3210 | IS3 family transposase | - |
| A9L45_RS31945 () | 3147161..3147810 | - | 650 | Protein_3211 | hypothetical protein | VF |
| A9L45_RS33730 () | 3148042..3149098 | + | 1057 | Protein_3212 | IS630 family transposase | - |
| A9L45_RS16725 () | 3149317..3149907 | - | 591 | WP_001144877.1 | hypothetical protein | VF |
| A9L45_RS16730 () | 3150091..3150738 | + | 648 | WP_001303944.1 | hypothetical protein | VF |
| A9L45_RS31955 () | 3150875..3151021 | - | 147 | WP_001414184.1 | hypothetical protein | - |
| A9L45_RS16735 () | 3151449..3151727 | + | 279 | WP_001303943.1 | hypothetical protein | - |
| A9L45_RS16740 () | 3152067..3152447 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| A9L45_RS16745 () | 3152444..3152791 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| A9L45_RS16750 () | 3152841..3154379 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| A9L45_RS33735 () | 3154664..3155298 | + | 635 | Protein_3220 | IS256 family transposase ISEic2 | Transposase |
| A9L45_RS34895 () | 3155345..3155455 | - | 111 | Protein_3221 | type III effector | - |
| A9L45_RS16770 () | 3155469..3156383 | + | 915 | Protein_3222 | Tyrosine recombinase XerD ; Integrase | Integrase |
| A9L45_RS16775 () | 3157044..3158369 | + | 1326 | WP_001025672.1 | hypothetical protein | VF |
| A9L45_RS31965 () | 3158709..3159283 | - | 575 | Protein_3224 | hypothetical protein | VF |
| A9L45_RS16780 () | 3159396..3159665 | - | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| A9L45_RS16785 () | 3159667..3160980 | - | 1314 | WP_024748516.1 | ISNCY family transposase KIS | Transposase |
| A9L45_RS16790 () | 3161132..3161731 | - | 600 | WP_001228304.1 | Outer membrane protein X | VF |
| A9L45_RS16795 () | 3161799..3164144 | - | 2346 | WP_129137390.1 | host specificity protein J | - |
| A9L45_RS33740 () | 3164096..3165271 | - | 1176 | WP_001304109.1 | host specificity protein J | - |
| A9L45_RS16800 () | 3165614..3166246 | - | 633 | WP_050439450.1 | tail assembly protein | - |
| A9L45_RS16805 () | 3166192..3166935 | - | 744 | WP_046671488.1 | C40 family peptidase | - |
| A9L45_RS16810 () | 3166946..3167644 | - | 699 | WP_001179515.1 | phage minor tail protein L | - |
| A9L45_RS16815 () | 3167644..3167985 | - | 342 | WP_000807954.1 | phage tail protein | - |
| A9L45_RS16820 () | 3167978..3171220 | - | 3243 | WP_065763508.1 | phage tail tape measure protein | - |
| A9L45_RS16825 () | 3171268..3171477 | - | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| A9L45_RS16830 () | 3171573..3171947 | - | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| A9L45_RS16835 () | 3171962..3172678 | - | 717 | WP_001275464.1 | immunoglobulin domain-containing protein | - |
| A9L45_RS16840 () | 3172744..3173088 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| A9L45_RS16845 () | 3173085..3173531 | - | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| A9L45_RS16850 () | 3173528..3173878 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| A9L45_RS16855 () | 3173889..3174215 | - | 327 | WP_000125984.1 | head-tail connector protein | - |
| A9L45_RS16860 () | 3174212..3176796 | - | 2585 | Protein_3242 | phage portal protein | - |
| A9L45_RS34900 () | 3176742..3176891 | - | 150 | WP_149025379.1 | hypothetical protein | - |
| A9L45_RS16865 () | 3177007..3178944 | - | 1938 | WP_000172999.1 | phage major capsid protein | - |
| A9L45_RS16870 () | 3179008..3180669 | - | 1662 | WP_001303049.1 | terminase large subunit | - |
| A9L45_RS16875 () | 3180666..3181229 | - | 564 | WP_001303051.1 | terminase small subunit | - |
| A9L45_RS31975 () | 3181519..3181884 | - | 366 | WP_015994246.1 | HNH endonuclease | - |
| A9L45_RS16885 () | 3181926..3182153 | + | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| A9L45_RS34905 () | 3182578..3182763 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| A9L45_RS34915 () | 3182991..3183137 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| A9L45_RS16900 () | 3183137..3183706 | - | 570 | WP_001056806.1 | hypothetical protein | - |
| A9L45_RS16905 () | 3183977..3184510 | - | 534 | WP_000992137.1 | lysozyme | - |
| A9L45_RS16910 () | 3184561..3184905 | - | 345 | WP_000731259.1 | YdfR family protein | - |
| A9L45_RS16915 () | 3184910..3185125 | - | 216 | WP_024164617.1 | class II holin family protein | - |
| A9L45_RS16925 () | 3185564..3187414 | - | 1851 | WP_064261944.1 | SASA family carbohydrate esterase | - |
| A9L45_RS16930 () | 3187914..3188183 | - | 270 | WP_000752026.1 | Shiga toxin subunit B | VF |
| A9L45_RS16935 () | 3188193..3189140 | - | 948 | WP_000691354.1 | Shiga toxin subunit A | VF |
| A9L45_RS16940 () | 3189647..3190081 | - | 435 | WP_001204852.1 | antitermination protein | - |
| A9L45_RS16945 () | 3190074..3190268 | - | 195 | WP_000144759.1 | phage NinH family protein | - |
| A9L45_RS16950 () | 3190265..3190870 | - | 606 | WP_001107998.1 | recombination protein NinG | - |
| A9L45_RS16955 () | 3190870..3191592 | - | 723 | WP_001004018.1 | DNA-binding protein | - |
| A9L45_RS16960 () | 3191667..3192344 | - | 678 | WP_000290551.1 | phage antirepressor Ant | - |
| A9L45_RS31990 () | 3192620..3192802 | - | 183 | WP_001254256.1 | NinE family protein | - |
| A9L45_RS16965 () | 3192799..3193326 | - | 528 | WP_000153268.1 | phage N-6-adenine-methyltransferase | - |
| A9L45_RS16970 () | 3193323..3193769 | - | 447 | WP_001310475.1 | recombination protein NinB | - |
| A9L45_RS16975 () | 3193726..3193962 | - | 237 | WP_001281772.1 | Lar family restriction alleviation protein | - |
| A9L45_RS16980 () | 3193973..3194188 | - | 216 | WP_000103679.1 | hypothetical protein | - |
| A9L45_RS16985 () | 3194321..3194599 | - | 279 | WP_001000130.1 | hypothetical protein | - |
| A9L45_RS16990 () | 3194670..3196046 | - | 1377 | WP_001248388.1 | replicative DNA helicase | - |
| A9L45_RS16995 () | 3196043..3196864 | - | 822 | WP_000539349.1 | replication protein | - |
| A9L45_RS35460 () | 3196851..3197012 | - | 162 | WP_000166961.1 | hypothetical protein | - |
| A9L45_RS17000 () | 3197045..3197341 | - | 297 | WP_000438524.1 | hypothetical protein | - |
| A9L45_RS17005 () | 3197480..3197707 | - | 228 | WP_001180318.1 | helix-turn-helix domain-containing protein | - |
| A9L45_RS17010 () | 3197786..3198493 | + | 708 | WP_000250473.1 | helix-turn-helix transcriptional regulator | - |
| A9L45_RS17015 () | 3198554..3198895 | + | 342 | WP_000885203.1 | DUF3024 domain-containing protein | - |
| A9L45_RS17020 () | 3198963..3199424 | + | 462 | WP_001221211.1 | hypothetical protein | - |
| A9L45_RS17025 () | 3199418..3200464 | + | 1047 | WP_000957426.1 | serine/threonine protein kinase | - |
| A9L45_RS35465 () | 3200467..3200631 | + | 165 | WP_000745483.1 | hypothetical protein | - |
| A9L45_RS17030 () | 3201120..3201503 | + | 384 | WP_000198445.1 | hypothetical protein | - |
| A9L45_RS17035 () | 3201565..3202188 | + | 624 | WP_000095081.1 | hypothetical protein | - |
| A9L45_RS17040 () | 3202369..3202737 | + | 369 | WP_000065373.1 | DUF2528 family protein | - |
| A9L45_RS34925 () | 3202810..3202950 | + | 141 | WP_001198858.1 | protease FtsH-inhibitory lysogeny factor CIII | - |
| A9L45_RS34930 () | 3202943..3203086 | + | 144 | WP_000361826.1 | host cell division inhibitory peptide Kil | - |
| A9L45_RS17050 () | 3203162..3203458 | + | 297 | WP_000995407.1 | host-nuclease inhibitor protein Gam | - |
| A9L45_RS17055 () | 3203464..3204249 | + | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| A9L45_RS17060 () | 3204246..3204923 | + | 678 | WP_000186785.1 | YqaJ viral recombinase family protein | - |
| A9L45_RS17065 () | 3204923..3205105 | + | 183 | WP_001303590.1 | DUF1317 domain-containing protein | - |
| A9L45_RS17070 () | 3205078..3205269 | + | 192 | WP_000548547.1 | DUF1382 family protein | - |
| A9L45_RS17075 () | 3205346..3205561 | + | 216 | WP_000188870.1 | hypothetical protein | - |
| A9L45_RS32015 () | 3205660..3205881 | + | 222 | WP_000763383.1 | TraR/DksA family transcriptional regulator | - |
| A9L45_RS17080 () | 3205878..3206825 | + | 948 | WP_001289954.1 | ead/Ea22-like family protein | - |
| A9L45_RS34935 () | 3206827..3207003 | + | 177 | WP_001356547.1 | hypothetical protein | - |
| A9L45_RS17090 () | 3207337..3207693 | + | 357 | WP_000207903.1 | hypothetical protein | - |
| A9L45_RS17095 () | 3207690..3208052 | + | 363 | WP_000610375.1 | DUF551 domain-containing protein | - |
| A9L45_RS17100 () | 3208140..3208382 | + | 243 | WP_000457728.1 | DUF4222 domain-containing protein | - |
| A9L45_RS17105 () | 3208386..3208520 | + | 135 | WP_000556583.1 | hypothetical protein | - |
| A9L45_RS17110 () | 3208539..3208793 | + | 255 | WP_001193437.1 | excisionase family protein | - |
| A9L45_RS17115 () | 3208827..3210113 | + | 1287 | WP_000063643.1 | Putative defective protein IntQ ; Integrase | Integrase |
| A9L45_RS17120 () | 3210134..3210835 | + | 702 | WP_027868261.1 | HTH-type transcriptional regulator MlrA | - |
| A9L45_RS17125 () | 3210895..3211002 | + | 108 | WP_001216963.1 | protein YohO | - |
| A9L45_RS17130 () | 3210983..3211714 | - | 732 | WP_000783120.1 | glycine betaine ABC transporter permease YehW | - |
| A9L45_RS17135 () | 3211719..3212645 | - | 927 | WP_000569336.1 | glycine betaine ABC transporter ATP binding protein YehX | - |
| A9L45_RS17140 () | 3212638..3213795 | - | 1158 | WP_000221794.1 | glycine betaine ABC transporter permease YehY | - |
| A9L45_RS17145 () | 3213802..3214719 | - | 918 | WP_001131252.1 | glycine betaine ABC transporter substrate-binding protein OsmF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|