MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 33390 bp
Accession: NZ_CP016556 Location: 1221110..1254499 Organism: Vibrio coralliilyticus strain 58 Replicon: chromosome
Accession: NZ_CP016556 Location: 1221110..1254499 Organism: Vibrio coralliilyticus strain 58 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BA953_RS05390 () | 1216344..1217615 | - | 1272 | WP_019274187.1 | dicarboxylate/amino acid:cation symporter | - |
| BA953_RS05395 () | 1217903..1218508 | - | 606 | WP_019274186.1 | nucleotide exchange factor GrpE | - |
| BA953_RS05400 () | 1218653..1219537 | + | 885 | WP_019274185.1 | NAD(+) kinase | - |
| BA953_RS05405 () | 1219744..1221408 | + | 1665 | WP_065740588.1 | DNA repair protein RecN | - |
| BA953_RS05410 () | 1221598..1221957 | + | 360 | WP_006959629.1 | outer membrane protein assembly factor BamE | - |
| BA953_RS05415 () | 1222091..1222444 | - | 354 | WP_006959630.1 | RnfH family protein | - |
| BA953_RS05420 () | 1222434..1222877 | - | 444 | WP_006959631.1 | ubiquinone-binding protein | - |
| BA953_RS05425 () | 1222996..1223481 | + | 486 | WP_006959632.1 | SsrA-binding protein SmpB | - |
| BA953_RS05435 () | 1224081..1225319 | + | 1239 | WP_065740589.1 | Prophage integrase IntA ; Integrase | Integrase |
| BA953_RS05440 () | 1225443..1226597 | - | 1155 | WP_065740590.1 | restriction endonuclease | - |
| BA953_RS05445 () | 1227220..1230491 | - | 3272 | Protein_1099 | type I restriction endonuclease subunit R | - |
| BA953_RS05450 () | 1230484..1231158 | - | 675 | WP_065740591.1 | abortive infection family protein | - |
| BA953_RS05455 () | 1231158..1232543 | - | 1386 | WP_081305542.1 | restriction endonuclease subunit S | - |
| BA953_RS05460 () | 1232550..1234169 | - | 1620 | WP_065740592.1 | type I restriction-modification system subunit M | - |
| BA953_RS05465 () | 1234322..1234903 | - | 582 | WP_065740593.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| BA953_RS05470 () | 1235070..1236170 | - | 1101 | WP_065741726.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| BA953_RS05475 () | 1236160..1236648 | - | 489 | WP_065740594.1 | helix-turn-helix domain-containing protein | - |
| BA953_RS05480 () | 1236641..1236841 | - | 201 | WP_065740595.1 | AlpA family transcriptional regulator | - |
| BA953_RS05485 () | 1236931..1237860 | - | 930 | WP_065740596.1 | hypothetical protein | - |
| BA953_RS05490 () | 1238209..1238547 | - | 339 | WP_155759882.1 | hypothetical protein | - |
| BA953_RS05495 () | 1238775..1239023 | + | 249 | WP_065740598.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| BA953_RS05500 () | 1239023..1240324 | + | 1302 | WP_065740599.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| BA953_RS05505 () | 1240661..1240891 | + | 231 | Protein_1111 | integrase arm-type DNA-binding domain-containing protein | - |
| BA953_RS05510 () | 1241043..1242011 | - | 969 | WP_065740601.1 | HTH-type transcriptional regulator CdhR | VF |
| BA953_RS05515 () | 1242161..1242931 | + | 771 | WP_065740602.1 | MBL fold metallo-hydrolase | - |
| BA953_RS25375 () | 1243465..1243926 | + | 462 | Protein_1114 | HipA domain-containing protein | - |
| BA953_RS25070 () | 1244132..1244296 | - | 165 | Protein_1115 | IS3 family transposase ISVal2 | Transposase |
| BA953_RS05530 () | 1245143..1245352 | + | 210 | WP_065740605.1 | hypothetical protein | - |
| BA953_RS05535 () | 1245568..1246704 | - | 1137 | WP_155759883.1 | hypothetical protein | - |
| BA953_RS05540 () | 1247369..1247854 | - | 486 | WP_065740607.1 | hypothetical protein | - |
| BA953_RS05545 () | 1247838..1248650 | - | 813 | WP_065740608.1 | hypothetical protein | VF |
| BA953_RS05550 () | 1249631..1249837 | + | 207 | WP_065740609.1 | hypothetical protein | - |
| BA953_RS05555 () | 1250012..1251274 | + | 1263 | WP_065741727.1 | ATP-binding protein | - |
| BA953_RS05560 () | 1251271..1252524 | + | 1254 | WP_065740610.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| BA953_RS05565 () | 1252534..1254663 | + | 2130 | WP_065740611.1 | peptidase domain-containing ABC transporter | - |
| BA953_RS05570 () | 1254981..1255976 | + | 996 | WP_065740612.1 | helix-turn-helix domain-containing protein | - |
| BA953_RS05575 () | 1256168..1256977 | - | 810 | WP_065740613.1 | M15 family metallopeptidase | - |
| BA953_RS05580 () | 1257207..1258517 | - | 1311 | WP_065740614.1 | PAS domain-containing methyl-accepting chemotaxis protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|