MGE detailed information
MGE type: Conjugative plasmid MGE length: 90835 bp
Accession: NZ_CP016548 Location: 1..90835 Organism: Escherichia coli strain O177:H21 Replicon: plasmid unnamed2
Accession: NZ_CP016548 Location: 1..90835 Organism: Escherichia coli strain O177:H21 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BB405_RS32500 () | 189..905 | + | 717 | WP_171843250.1 | hypothetical protein | - |
| BB405_RS26445 () | 1187..1363 | + | 177 | WP_001348085.1 | hypothetical protein | - |
| BB405_RS26455 () | 1455..1721 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| BB405_RS26460 () | 1786..2697 | + | 912 | Protein_4 | Rpn family recombination-promoting nuclease/putative transposase | - |
| BB405_RS32505 () | 2754..2903 | + | 150 | WP_171843249.1 | hypothetical protein | - |
| BB405_RS26465 () | 2945..3197 | - | 253 | Protein_6 | helix-turn-helix transcriptional regulator | - |
| BB405_RS31210 () | 3231..3427 | - | 197 | Protein_7 | hypothetical protein | - |
| BB405_RS26475 () | 3776..4624 | + | 849 | WP_021532736.1 | DUF4942 domain-containing protein | - |
| BB405_RS26480 () | 4710..5045 | - | 336 | WP_000157103.1 | hypothetical protein | - |
| BB405_RS26485 () | 5278..5610 | + | 333 | WP_001291058.1 | hypothetical protein | - |
| BB405_RS26490 () | 5622..8342 | + | 2721 | WP_029391987.1 | Protein TraI | Relaxase |
| BB405_RS26495 () | 8563..10862 | - | 2300 | Protein_12 | TraM recognition domain-containing protein | - |
| BB405_RS26500 () | 10843..11961 | - | 1119 | WP_029391999.1 | DsbC family protein | - |
| BB405_RS32140 () | 11958..13310 | - | 1353 | WP_065749868.1 | conjugal transfer protein TrbA | - |
| BB405_RS32510 () | 13767..13943 | - | 177 | WP_032172741.1 | hypothetical protein | - |
| BB405_RS26520 () | 14094..14561 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| BB405_RS26525 () | 14721..15344 | + | 624 | WP_001155252.1 | DNA-binding protein | - |
| BB405_RS26530 () | 15542..15757 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| BB405_RS26535 () | 15761..16129 | - | 369 | WP_029391948.1 | hypothetical protein | - |
| BB405_RS26540 () | 16141..16332 | - | 192 | WP_000751583.1 | hypothetical protein | - |
| BB405_RS26545 () | 16428..16670 | - | 243 | WP_029391947.1 | hypothetical protein | - |
| BB405_RS26555 () | 16999..17151 | + | 153 | WP_021532728.1 | Hok/Gef family protein | - |
| BB405_RS26560 () | 17148..17309 | - | 162 | WP_021580032.1 | hypothetical protein | - |
| BB405_RS31230 () | 17465..17596 | - | 132 | Protein_24 | ethanolamine utilization protein EutE | - |
| BB405_RS26565 () | 17691..17900 | + | 210 | WP_000062946.1 | HEAT repeat domain-containing protein | - |
| BB405_RS26570 () | 17965..18618 | - | 654 | WP_029391946.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| BB405_RS26575 () | 18706..20871 | - | 2166 | WP_065749869.1 | DotA/TraY family protein | - |
| BB405_RS26580 () | 20944..21513 | - | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| BB405_RS26585 () | 21510..22715 | - | 1206 | WP_029391944.1 | conjugal transfer protein TraW | - |
| BB405_RS26590 () | 22676..23293 | - | 618 | WP_029391943.1 | hypothetical protein | - |
| BB405_RS26595 () | 23293..26337 | - | 3045 | WP_029391942.1 | conjugal transfer protein | - |
| BB405_RS26600 () | 26513..26893 | - | 381 | WP_000690886.1 | hypothetical protein | - |
| BB405_RS26605 () | 26893..27159 | - | 267 | Protein_33 | hypothetical protein | - |
| BB405_RS26610 () | 27397..27714 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| BB405_RS26615 () | 27711..28244 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| BB405_RS26620 () | 28338..29483 | - | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| BB405_RS26630 () | 29807..31069 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| BB405_RS26635 () | 31251..31754 | - | 504 | WP_065749870.1 | prepilin-type cleavage/methylation domain-containing protein | - |
| BB405_RS26640 () | 31805..32905 | - | 1101 | WP_029391916.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| BB405_RS26645 () | 32907..34415 | - | 1509 | WP_021532701.1 | Type II secretion system protein E | VF |
| BB405_RS26650 () | 34512..35108 | - | 597 | WP_029391917.1 | hypothetical protein | - |
| BB405_RS26655 () | 35204..35758 | - | 555 | WP_021532699.1 | hypothetical protein | - |
| BB405_RS26660 () | 35807..36259 | - | 453 | WP_029391918.1 | hypothetical protein | VF |
| BB405_RS26665 () | 36249..37544 | - | 1296 | WP_021532697.1 | type 4b pilus protein PilO2 | - |
| BB405_RS26670 () | 37565..39184 | - | 1620 | WP_021532696.1 | Outer membrane lipoprotein BfpB | VF |
| BB405_RS26675 () | 39215..39652 | - | 438 | WP_021532695.1 | type IV pilus biogenesis protein PilM | - |
| BB405_RS26680 () | 39657..40727 | - | 1071 | WP_029391919.1 | hypothetical protein | VF |
| BB405_RS26685 () | 40849..41244 | + | 396 | WP_029391920.1 | hypothetical protein | - |
| BB405_RS31235 () | 41749..42210 | - | 462 | WP_174843148.1 | PilI type IV pilus biogenesis protein | - |
| BB405_RS26700 () | 42268..42933 | - | 666 | WP_029391921.1 | hypothetical protein | - |
| BB405_RS26705 () | 43075..43716 | - | 642 | WP_077250484.1 | transcription termination factor NusG | - |
| BB405_RS26710 () | 44417..45289 | + | 873 | WP_021532687.1 | incFII family plasmid replication initiator RepA | - |
| BB405_RS26720 () | 46245..46496 | + | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| BB405_RS26725 () | 46493..46780 | + | 288 | WP_001611950.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BB405_RS26730 () | 46884..47474 | + | 591 | WP_029391923.1 | Serine acetyltransferase | VF |
| BB405_RS26735 () | 47577..48184 | + | 608 | Protein_56 | hypothetical protein | - |
| BB405_RS32515 () | 48385..48687 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| BB405_RS26745 () | 48684..49310 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| BB405_RS26750 () | 49498..50769 | - | 1272 | WP_000457521.1 | Y-family DNA polymerase | - |
| BB405_RS26755 () | 50769..51206 | - | 438 | WP_000109062.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| BB405_RS26760 () | 51203..51451 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| BB405_RS31245 () | 51752..52063 | + | 312 | WP_041498592.1 | hypothetical protein | - |
| BB405_RS26770 () | 52173..53075 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| BB405_RS32520 () | 53145..53297 | - | 153 | WP_171843251.1 | hypothetical protein | - |
| BB405_RS26775 () | 53460..54143 | + | 684 | WP_000086178.1 | DNA methylase | - |
| BB405_RS26780 () | 54144..54365 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| BB405_RS26785 () | 54377..54811 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| BB405_RS32160 () | 54862..55632 | + | 771 | WP_001696732.1 | hypothetical protein | - |
| BB405_RS26800 () | 56173..56475 | + | 303 | WP_072132163.1 | antirestriction protein | - |
| BB405_RS26805 () | 56522..56944 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| BB405_RS26810 () | 56941..57132 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| BB405_RS31265 () | 57095..57447 | + | 353 | Protein_72 | hypothetical protein | - |
| BB405_RS32525 () | 57440..57649 | + | 210 | WP_001611578.1 | hypothetical protein | - |
| BB405_RS26825 () | 57880..58407 | + | 528 | WP_029391983.1 | single-stranded DNA-binding protein | - |
| BB405_RS26830 () | 58568..60139 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| BB405_RS26835 () | 60159..60506 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| BB405_RS26840 () | 60506..61183 | - | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| BB405_RS26845 () | 61238..61405 | + | 168 | Protein_78 | DUF905 family protein | - |
| BB405_RS26850 () | 61469..63427 | + | 1959 | WP_029391984.1 | ParB/RepB/Spo0J family partition protein | - |
| BB405_RS26855 () | 63482..63916 | + | 435 | WP_029391985.1 | conjugation system SOS inhibitor PsiB | - |
| BB405_RS26860 () | 63913..64632 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| BB405_RS26865 () | 64629..65225 | + | 597 | WP_029391986.1 | hypothetical protein | - |
| BB405_RS26875 () | 65690..66190 | + | 501 | WP_000117633.1 | antirestriction protein ArdA | - |
| BB405_RS32530 () | 66192..66800 | - | 609 | WP_170852529.1 | hypothetical protein | - |
| BB405_RS26890 () | 66919..67353 | + | 435 | WP_029392001.1 | hypothetical protein | - |
| BB405_RS26895 () | 67445..67711 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| BB405_RS26900 () | 67776..68693 | + | 918 | WP_029392002.1 | Recombination-promoting nuclease RpnA | VF |
| BB405_RS31290 () | 68716..68913 | + | 198 | WP_072224325.1 | hypothetical protein | - |
| BB405_RS26905 () | 68944..69195 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| BB405_RS26910 () | 69229..69426 | - | 198 | WP_029392003.1 | hypothetical protein | - |
| BB405_RS26915 () | 69775..70623 | + | 849 | WP_021532736.1 | DUF4942 domain-containing protein | - |
| BB405_RS26920 () | 70709..71044 | - | 336 | WP_000157103.1 | hypothetical protein | - |
| BB405_RS26925 () | 71277..71609 | + | 333 | WP_001291058.1 | hypothetical protein | - |
| BB405_RS26930 () | 71621..74341 | + | 2721 | WP_029391987.1 | Protein TraI | Relaxase |
| BB405_RS26935 () | 74562..76862 | - | 2301 | WP_029392471.1 | TraM recognition domain-containing protein | - |
| BB405_RS26940 () | 76843..77961 | - | 1119 | WP_029391999.1 | DsbC family protein | - |
| BB405_RS32180 () | 77958..79319 | - | 1362 | WP_041498596.1 | hypothetical protein | - |
| BB405_RS32535 () | 79776..79952 | - | 177 | WP_032172741.1 | hypothetical protein | - |
| BB405_RS26960 () | 80103..80570 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| BB405_RS26965 () | 80730..81353 | + | 624 | WP_001155252.1 | DNA-binding protein | - |
| BB405_RS26970 () | 81551..81766 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| BB405_RS26975 () | 81770..82138 | - | 369 | WP_029391948.1 | hypothetical protein | - |
| BB405_RS30215 () | 82150..82341 | - | 192 | WP_000751583.1 | hypothetical protein | - |
| BB405_RS26980 () | 82437..82679 | - | 243 | WP_029391947.1 | hypothetical protein | - |
| BB405_RS30220 () | 83008..83160 | + | 153 | WP_021532728.1 | Hok/Gef family protein | - |
| BB405_RS26990 () | 83157..83318 | - | 162 | WP_021580032.1 | hypothetical protein | - |
| BB405_RS31305 () | 83474..83605 | - | 132 | Protein_107 | ethanolamine utilization protein EutE | - |
| BB405_RS26995 () | 83700..83909 | + | 210 | WP_000062946.1 | HEAT repeat domain-containing protein | - |
| BB405_RS27000 () | 83974..84627 | - | 654 | WP_029391946.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| BB405_RS27005 () | 84715..86880 | - | 2166 | WP_065749869.1 | DotA/TraY family protein | - |
| BB405_RS27010 () | 86953..87522 | - | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| BB405_RS27015 () | 87519..88723 | - | 1205 | Protein_112 | conjugal transfer protein TraW | - |
| BB405_RS27020 () | 88737..89300 | - | 564 | Protein_113 | conjugal transfer protein TraV | - |
| BB405_RS31310 () | 89300..90819 | - | 1520 | Protein_114 | ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|