MGE detailed information
MGE type: Conjugative plasmid MGE length: 86371 bp
Accession: NZ_CP016547 Location: 1..86371 Organism: Escherichia coli strain O177:H21 Replicon: plasmid unnamed1
Accession: NZ_CP016547 Location: 1..86371 Organism: Escherichia coli strain O177:H21 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BB405_RS32110 () | 1..826 | + | 826 | Protein_0 | IS66 family transposase ISCro1 | Transposase |
| BB405_RS32455 () | 888..1502 | + | 615 | WP_171843244.1 | hypothetical protein | - |
| BB405_RS32460 () | 1540..2100 | + | 561 | WP_171843245.1 | hypothetical protein | - |
| BB405_RS32465 () | 2421..2860 | - | 440 | Protein_3 | hypothetical protein | - |
| BB405_RS30085 () | 3204..3390 | - | 187 | Protein_4 | hemolysin expression modulator Hha | - |
| BB405_RS31170 () | 3525..4754 | - | 1230 | Protein_5 | topoisomerase C-terminal repeat-containing protein | - |
| BB405_RS32115 () | 4751..5065 | - | 315 | WP_171843246.1 | hypothetical protein | - |
| BB405_RS32470 () | 5026..5373 | - | 348 | WP_171843248.1 | hypothetical protein | - |
| BB405_RS32475 () | 5470..5628 | - | 159 | WP_171843247.1 | hypothetical protein | - |
| BB405_RS25955 () | 5633..6206 | - | 574 | Protein_9 | DNA topoisomerase III | - |
| BB405_RS31180 () | 6381..7399 | - | 1019 | Protein_10 | PcfJ domain-containing protein | - |
| BB405_RS31185 () | 7462..8049 | - | 588 | WP_077885646.1 | hypothetical protein | - |
| BB405_RS25965 () | 8143..8657 | - | 515 | Protein_12 | thermonuclease family protein | - |
| BB405_RS25970 () | 8704..9129 | - | 426 | WP_001428473.1 | hypothetical protein | - |
| BB405_RS25975 () | 9368..10491 | - | 1124 | Protein_14 | site-specific integrase | - |
| BB405_RS25980 () | 11604..12647 | - | 1044 | Protein_15 | hypothetical protein | VF |
| BB405_RS25985 () | 12660..13295 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| BB405_RS25990 () | 13299..13780 | - | 482 | Protein_17 | hypothetical protein | VF |
| BB405_RS25995 () | 13846..14403 | - | 558 | WP_000095048.1 | hypothetical protein | - |
| BB405_RS26000 () | 14448..15557 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| BB405_RS26005 () | 15548..17086 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| BB405_RS26010 () | 17111..17605 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| BB405_RS26015 () | 17589..18911 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| BB405_RS26020 () | 18950..20592 | - | 1643 | Protein_23 | Outer membrane lipoprotein BfpB | VF |
| BB405_RS26025 () | 20643..22574 | - | 1932 | WP_065749863.1 | type IV secretory system conjugative DNA transfer family protein | - |
| BB405_RS26030 () | 22616..23671 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| BB405_RS26035 () | 23690..24829 | - | 1140 | WP_000790641.1 | Type IV secretion system protein virB10 | VF |
| BB405_RS26040 () | 24819..25520 | - | 702 | WP_000274524.1 | Type IV secretion system protein PtlF | VF |
| BB405_RS26045 () | 25586..26320 | - | 735 | WP_000432283.1 | Type IV secretion system protein virB8 | VF |
| BB405_RS26055 () | 26486..28843 | - | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| BB405_RS26060 () | 28849..29169 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| BB405_RS31190 () | 29240..29428 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| BB405_RS26070 () | 29530..30114 | - | 585 | WP_001177114.1 | Type IV secretion system protein virB1 | VF |
| BB405_RS26075 () | 30135..30533 | - | 399 | WP_001153668.1 | hypothetical protein | - |
| BB405_RS26080 () | 30652..31089 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| BB405_RS26085 () | 31095..32330 | - | 1236 | WP_021580486.1 | hypothetical protein | VF |
| BB405_RS26090 () | 32333..32632 | - | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| BB405_RS26095 () | 32699..33334 | - | 636 | WP_000835765.1 | hypothetical protein | - |
| BB405_RS26100 () | 33346..34214 | + | 869 | Protein_38 | DNA primase | - |
| BB405_RS26105 () | 34251..34487 | - | 237 | WP_000750964.1 | EexN family lipoprotein | - |
| BB405_RS26110 () | 34491..35138 | - | 648 | WP_000653673.1 | hypothetical protein | VF |
| BB405_RS26115 () | 35144..36130 | - | 987 | WP_001028544.1 | type IV secretion system protein | - |
| BB405_RS26120 () | 36134..36391 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| BB405_RS26125 () | 36670..36927 | - | 258 | WP_000285945.1 | hypothetical protein | - |
| BB405_RS26130 () | 36960..37406 | - | 447 | WP_001243164.1 | hypothetical protein | - |
| BB405_RS32480 () | 37417..37587 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| BB405_RS30095 () | 37591..38034 | - | 444 | WP_000964331.1 | NfeD family protein | - |
| BB405_RS26140 () | 38408..39361 | - | 954 | WP_072089442.1 | SPFH/Band 7/PHB domain protein | - |
| BB405_RS26145 () | 39407..39601 | - | 195 | WP_001127356.1 | DUF1187 family protein | - |
| BB405_RS26150 () | 39594..40100 | - | 507 | WP_001326595.1 | CaiF/GrlA family transcriptional regulator | - |
| BB405_RS26155 () | 41178..42206 | + | 1029 | WP_001175209.1 | replication initiation protein | - |
| BB405_RS32485 () | 43254..43415 | + | 162 | WP_001128311.1 | hypothetical protein | - |
| BB405_RS26165 () | 43473..44681 | - | 1209 | WP_044722415.1 | IS200-IS605 family transposase IS609 | Transposase |
| BB405_RS26170 () | 45140..45301 | + | 162 | WP_001366886.1 | type I toxin-antitoxin system Hok family toxin | - |
| BB405_RS26175 () | 45451..46047 | + | 597 | WP_000125165.1 | hypothetical protein | - |
| BB405_RS32815 () | 46065..46349 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| BB405_RS26185 () | 46423..47088 | - | 666 | WP_000532149.1 | P-loop NTPase | - |
| BB405_RS32130 () | 47312..47527 | + | 216 | WP_001672020.1 | hypothetical protein | - |
| BB405_RS26195 () | 47676..48005 | + | 330 | WP_000855119.1 | hypothetical protein | - |
| BB405_RS26200 () | 48408..48923 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| BB405_RS26205 () | 49077..49568 | + | 492 | WP_065749866.1 | hypothetical protein | - |
| BB405_RS26210 () | 49565..49819 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| BB405_RS26215 () | 49816..50058 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| BB405_RS32490 () | 50264..50497 | + | 234 | WP_000553847.1 | hypothetical protein | - |
| BB405_RS26225 () | 50629..50922 | + | 294 | WP_000673428.1 | hypothetical protein | - |
| BB405_RS26230 () | 51339..51521 | - | 183 | WP_024135751.1 | hypothetical protein | - |
| BB405_RS26235 () | 52079..52261 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| BB405_RS26240 () | 52286..52723 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| BB405_RS26245 () | 52853..53179 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| BB405_RS26250 () | 53176..53385 | - | 210 | WP_000951714.1 | hypothetical protein | - |
| BB405_RS26255 () | 53387..53593 | - | 207 | WP_000999175.1 | hypothetical protein | - |
| BB405_RS26260 () | 53590..54039 | - | 450 | WP_000206698.1 | hypothetical protein | - |
| BB405_RS26265 () | 54059..54766 | - | 708 | WP_021503228.1 | hypothetical protein | - |
| BB405_RS26270 () | 54768..55520 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| BB405_RS26275 () | 55538..55938 | - | 401 | Protein_74 | zinc transporter | - |
| BB405_RS26280 () | 56305..56646 | + | 342 | WP_000725934.1 | hypothetical protein | Relaxase |
| BB405_RS26285 () | 56643..58931 | + | 2289 | Protein_76 | hypothetical protein | Relaxase |
| BB405_RS26290 () | 58986..59663 | + | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| BB405_RS26295 () | 59663..60010 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| BB405_RS26300 () | 60030..61601 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| BB405_RS26305 () | 61615..63189 | + | 1575 | Protein_80 | relaxase | - |
| BB405_RS32495 () | 63232..63672 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| BB405_RS26320 () | 64018..64224 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| BB405_RS26325 () | 64293..66458 | - | 2166 | WP_065749864.1 | type IA DNA topoisomerase | - |
| BB405_RS26330 () | 66463..67038 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| BB405_RS26335 () | 67208..68884 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| BB405_RS26340 () | 68979..69494 | - | 516 | WP_000698398.1 | thermonuclease family protein | - |
| BB405_RS26345 () | 69541..70194 | - | 654 | WP_000572553.1 | hypothetical protein | - |
| BB405_RS26350 () | 70206..71330 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| BB405_RS26355 () | 71747..72187 | - | 441 | WP_065749865.1 | hypothetical protein | - |
| BB405_RS26360 () | 72469..73512 | - | 1044 | Protein_90 | hypothetical protein | VF |
| BB405_RS26365 () | 73525..74160 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| BB405_RS26370 () | 74164..74646 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| BB405_RS26375 () | 74712..75269 | - | 558 | WP_000095048.1 | hypothetical protein | - |
| BB405_RS26380 () | 75314..76423 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| BB405_RS26385 () | 76414..77952 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| BB405_RS26390 () | 77977..78471 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| BB405_RS26395 () | 78455..79777 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| BB405_RS26400 () | 79816..81435 | - | 1620 | WP_149024897.1 | Outer membrane lipoprotein BfpB | VF |
| BB405_RS26405 () | 81509..83340 | - | 1832 | Protein_99 | type IV secretory system conjugative DNA transfer family protein | - |
| BB405_RS26410 () | 83478..84527 | - | 1050 | Protein_100 | P-type DNA transfer ATPase VirB11 | - |
| BB405_RS26415 () | 84546..85681 | - | 1136 | Protein_101 | TrbI/VirB10 family protein | - |
| BB405_RS26420 () | 85671..86371 | - | 701 | Protein_102 | Type IV secretion system protein PtlF | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|