MGE detailed information
MGE type: Genomic_island MGE length: 30174 bp
Accession: NZ_CP016456 Location: 20543..50716 Organism: Sphingobium sp. RAC03 Replicon: chromosome
Accession: NZ_CP016456 Location: 20543..50716 Organism: Sphingobium sp. RAC03 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSY17_RS04690 () | 17105..18211 | + | 1107 | WP_069064609.1 | conjugal transfer protein TraN | - |
| BSY17_RS04695 () | 18183..19076 | + | 894 | WP_150125727.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| BSY17_RS04700 () | 19048..19647 | + | 600 | WP_069064611.1 | S26 family signal peptidase | - |
| BSY17_RS04705 () | 19644..20546 | + | 903 | WP_069064612.1 | conjugal transfer protein TraF | - |
| BSY17_RS04710 () | 20585..21139 | + | 555 | WP_150125728.1 | hypothetical protein | - |
| BSY17_RS04715 () | 21163..22329 | - | 1167 | WP_069064614.1 | ATP-binding protein | - |
| BSY17_RS04720 () | 22437..23858 | + | 1422 | WP_069064615.1 | conjugal transfer protein TraH | - |
| BSY17_RS04725 () | 23883..27635 | + | 3753 | WP_069066792.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| BSY17_RS04735 () | 28214..28462 | + | 249 | WP_069064617.1 | Arc family DNA-binding protein | Antitoxin Detail |
| BSY17_RS04740 () | 28462..28881 | + | 420 | WP_069064618.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BSY17_RS04745 () | 28894..29808 | + | 915 | WP_069064619.1 | HEPN domain-containing protein | - |
| BSY17_RS04750 () | 30368..32782 | - | 2415 | WP_069064620.1 | AAA family ATPase | - |
| BSY17_RS04755 () | 32779..33327 | - | 549 | WP_069064621.1 | hypothetical protein | - |
| BSY17_RS04760 () | 33324..35063 | - | 1740 | WP_150125729.1 | hypothetical protein | - |
| BSY17_RS04765 () | 35392..37068 | + | 1677 | WP_069064623.1 | AIPR family protein | - |
| BSY17_RS04770 () | 37225..38577 | + | 1353 | WP_069064624.1 | IS1380 family transposase ISSp1 | Transposase |
| BSY17_RS04775 () | 39057..40286 | + | 1230 | WP_069064625.1 | hypothetical protein | - |
| BSY17_RS04780 () | 40683..41177 | + | 495 | WP_069064626.1 | hypothetical protein | - |
| BSY17_RS04785 () | 41177..42484 | + | 1308 | WP_069064627.1 | hypothetical protein | - |
| BSY17_RS04790 () | 42640..42981 | - | 342 | Protein_37 | IS1182 family transposase ISPsy36 | Transposase |
| BSY17_RS04795 () | 43245..45203 | + | 1959 | WP_171899280.1 | AAA family ATPase | - |
| BSY17_RS04800 () | 45342..47120 | + | 1779 | WP_150125730.1 | hypothetical protein | - |
| BSY17_RS04805 () | 47485..47671 | - | 187 | Protein_40 | hypothetical protein | - |
| BSY17_RS04810 () | 47954..48445 | - | 492 | WP_069064630.1 | MucR family transcriptional regulator | - |
| BSY17_RS04815 () | 48991..49380 | - | 390 | WP_069064631.1 | hypothetical protein | - |
| BSY17_RS04825 () | 50123..50716 | + | 594 | WP_069064633.1 | alpha-ketoglutarate-dependent dioxygenase AlkB | - |
| BSY17_RS04830 () | 50726..50917 | - | 192 | WP_069064634.1 | hypothetical protein | - |
| BSY17_RS04835 () | 50914..51564 | - | 651 | WP_083217041.1 | SOS response-associated peptidase family protein | - |
| BSY17_RS04840 () | 51614..52276 | - | 663 | WP_069064635.1 | SOS response-associated peptidase family protein | - |
| BSY17_RS04845 () | 52391..52666 | - | 276 | WP_069064636.1 | HU family DNA-binding protein | - |
| BSY17_RS04850 () | 52878..53324 | + | 447 | WP_171899281.1 | thioredoxin TrxC | - |
| BSY17_RS04855 () | 53294..53650 | + | 357 | WP_069064638.1 | hypothetical protein | - |
| BSY17_RS04860 () | 53620..54441 | - | 822 | WP_069064639.1 | exodeoxyribonuclease III | - |
| BSY17_RS04865 () | 54514..54810 | - | 297 | WP_069064640.1 | N-acetyltransferase | - |
| BSY17_RS21490 () | 55226..55399 | + | 174 | WP_171899186.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|