MGE detailed information
MGE type: Conjugative plasmid MGE length: 52710 bp
Accession: NZ_CP016446 Location: 1..52710 Organism: Pseudomonas putida strain IEC33019 Replicon: plasmid pIEC33019
Accession: NZ_CP016446 Location: 1..52710 Organism: Pseudomonas putida strain IEC33019 Replicon: plasmid pIEC33019
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IEC33019_RS00005 () | 21..389 | + | 369 | WP_015272386.1 | hypothetical protein | - |
| IEC33019_RS00010 () | 422..739 | + | 318 | WP_015272387.1 | hypothetical protein | - |
| IEC33019_RS00015 () | 743..1831 | + | 1089 | WP_015272388.1 | DNA cytosine methyltransferase | - |
| IEC33019_RS00020 () | 1842..2102 | + | 261 | WP_015272389.1 | hypothetical protein | - |
| IEC33019_RS00030 () | 2441..3058 | + | 618 | WP_015272392.1 | recombinase family protein | - |
| IEC33019_RS00035 () | 3045..4181 | + | 1137 | WP_015272393.1 | replication initiator protein A | - |
| IEC33019_RS00040 () | 4695..7028 | - | 2334 | Protein_6 | Tn3-like element ISPa38 family transposase | - |
| IEC33019_RS00045 () | 7323..7910 | - | 588 | Protein_7 | DUF4158 domain-containing protein | - |
| IEC33019_RS00050 () | 7935..8699 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| IEC33019_RS27440 () | 8817..8885 | - | 69 | Protein_9 | EAL domain-containing protein | - |
| IEC33019_RS00060 () | 9206..9706 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| IEC33019_RS00070 () | 9834..10673 | - | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| IEC33019_RS00075 () | 10667..11014 | - | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| IEC33019_RS00080 () | 11236..12279 | + | 1044 | WP_096862040.1 | IS110 family transposase | - |
| IEC33019_RS00085 () | 12519..13358 | - | 840 | WP_096862041.1 | AadA family aminoglycoside 3''-O-nucleotidyltransferase | - |
| IEC33019_RS00090 () | 13507..14163 | - | 657 | WP_000415714.1 | quinolone resistance pentapeptide repeat protein QnrVC1 | - |
| IEC33019_RS00095 () | 14509..15246 | - | 738 | WP_099592735.1 | DIM/SIM/IMP family subclass B1 metallo-beta-lactamase | - |
| IEC33019_RS00100 () | 15399..16412 | + | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| IEC33019_RS00110 () | 16847..17407 | + | 561 | WP_015648284.1 | recombinase family protein | - |
| IEC33019_RS00115 () | 17411..20377 | + | 2967 | WP_027590725.1 | Tn3 family transposase | - |
| IEC33019_RS00120 () | 20374..20586 | - | 213 | WP_099592737.1 | hypothetical protein | - |
| IEC33019_RS00125 () | 20781..21431 | + | 651 | WP_015272395.1 | DNA-binding protein | - |
| IEC33019_RS00135 () | 22199..23620 | + | 1422 | WP_099592740.1 | group II intron reverse transcriptase/maturase | - |
| IEC33019_RS00145 () | 23973..24398 | + | 426 | WP_015272397.1 | DUF192 domain-containing protein | - |
| IEC33019_RS00150 () | 24408..24644 | + | 237 | WP_012477631.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| IEC33019_RS00155 () | 24641..25078 | + | 438 | WP_012477632.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| IEC33019_RS27445 () | 25085..25246 | + | 162 | WP_015272398.1 | hypothetical protein | - |
| IEC33019_RS00160 () | 25374..25634 | + | 261 | WP_015272399.1 | hypothetical protein | - |
| IEC33019_RS00165 () | 26315..27151 | + | 837 | WP_015272400.1 | DUF945 domain-containing protein | - |
| IEC33019_RS00170 () | 27207..27635 | + | 429 | WP_015272401.1 | hypothetical protein | - |
| IEC33019_RS00175 () | 27652..28155 | + | 504 | WP_015272402.1 | hypothetical protein | - |
| IEC33019_RS00180 () | 28216..28566 | + | 351 | WP_015272403.1 | hypothetical protein | - |
| IEC33019_RS00185 () | 28614..28826 | + | 213 | WP_172959791.1 | hypothetical protein | - |
| IEC33019_RS00190 () | 29484..29738 | + | 255 | WP_015272405.1 | hypothetical protein | - |
| IEC33019_RS27235 () | 29809..29985 | + | 177 | WP_019692578.1 | hypothetical protein | - |
| IEC33019_RS00195 () | 30046..30291 | + | 246 | WP_015272406.1 | hypothetical protein | - |
| IEC33019_RS00200 () | 30338..31117 | - | 780 | WP_019692577.1 | SprT-like domain-containing protein | - |
| IEC33019_RS00205 () | 31386..31652 | - | 267 | WP_052014800.1 | hypothetical protein | - |
| IEC33019_RS00210 () | 31788..32492 | - | 705 | WP_019692575.1 | hypothetical protein | - |
| IEC33019_RS00215 () | 32496..32858 | - | 363 | WP_020723543.1 | hypothetical protein | - |
| IEC33019_RS00220 () | 33351..33680 | + | 330 | WP_015272411.1 | hypothetical protein | - |
| IEC33019_RS00225 () | 33680..35218 | + | 1539 | WP_015272412.1 | type IV secretion system DNA-binding domain-containing protein | - |
| IEC33019_RS00230 () | 35219..38173 | + | 2955 | WP_015272413.1 | conjugative relaxase | - |
| IEC33019_RS00235 () | 38272..38814 | - | 543 | Protein_43 | hypothetical protein | - |
| IEC33019_RS00240 () | 39064..39534 | - | 471 | WP_132476325.1 | hypothetical protein | - |
| IEC33019_RS00245 () | 39546..40097 | - | 552 | WP_099592748.1 | hypothetical protein | - |
| IEC33019_RS00250 () | 40149..41180 | - | 1032 | WP_065863000.1 | Flp pilus assembly complex ATPase component TadA | - |
| IEC33019_RS00255 () | 41192..42349 | - | 1158 | WP_065862999.1 | type IV secretion system protein VirB10 | - |
| IEC33019_RS00260 () | 42346..43224 | - | 879 | WP_065862998.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| IEC33019_RS00265 () | 43227..43946 | - | 720 | WP_065862997.1 | type IV secretion system protein | - |
| IEC33019_RS00275 () | 44226..45293 | - | 1068 | WP_065862996.1 | type IV secretion system protein | - |
| IEC33019_RS00280 () | 45306..45551 | - | 246 | WP_065862995.1 | EexN family lipoprotein | - |
| IEC33019_RS00285 () | 45557..46330 | - | 774 | WP_081311800.1 | type IV secretion system protein | - |
| IEC33019_RS00290 () | 46332..48980 | - | 2649 | WP_099592750.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| IEC33019_RS00295 () | 48980..49297 | - | 318 | WP_044275511.1 | VirB3 family type IV secretion system protein | - |
| IEC33019_RS00300 () | 49346..49645 | - | 300 | WP_086239838.1 | hypothetical protein | - |
| IEC33019_RS00305 () | 49821..50693 | - | 873 | WP_019692586.1 | lytic transglycosylase domain-containing protein | - |
| IEC33019_RS00310 () | 50756..51010 | + | 255 | WP_086239839.1 | H-NS histone family protein | - |
| IEC33019_RS00315 () | 51014..51430 | + | 417 | WP_019692584.1 | hypothetical protein | - |
| IEC33019_RS00320 () | 51435..51746 | + | 312 | WP_019692583.1 | hypothetical protein | - |
| IEC33019_RS00325 () | 51757..52098 | + | 342 | WP_019692582.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|