MGE detailed information
MGE type: Genomic_island MGE length: 15363 bp
Accession: NZ_CP016383 Location: 2699087..2714449 Organism: Vibrio mimicus strain SCCF01 Replicon: chromosome
Accession: NZ_CP016383 Location: 2699087..2714449 Organism: Vibrio mimicus strain SCCF01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| vm_RS12610 () | 2695324..2697201 | + | 1878 | WP_000372613.1 | RNA polymerase sigma factor RpoD | - |
| vm_RS12620 () | 2697584..2698825 | + | 1242 | WP_070382295.1 | tyrosine-type recombinase/integrase | - |
| vm_RS12625 () | 2699087..2700310 | - | 1224 | WP_029847931.1 | RelA/SpoT domain-containing protein | Toxin Detail |
| vm_RS12630 () | 2700307..2700774 | - | 468 | WP_070382296.1 | DUF4065 domain-containing protein | Antitoxin Detail |
| vm_RS12635 () | 2701028..2701699 | - | 672 | WP_070382297.1 | hypothetical protein | - |
| vm_RS12640 () | 2701844..2702881 | + | 1038 | WP_070382298.1 | helix-turn-helix domain-containing protein | - |
| vm_RS12645 () | 2703048..2703692 | + | 645 | WP_070382299.1 | inovirus Gp2 family protein | - |
| vm_RS12650 () | 2703734..2704180 | - | 447 | WP_070382300.1 | hypothetical protein | - |
| vm_RS12655 () | 2704291..2705280 | - | 990 | WP_070382301.1 | 50S ribosome-binding GTPase | - |
| vm_RS12660 () | 2705358..2705579 | + | 222 | WP_047109997.1 | AlpA family transcriptional regulator | - |
| vm_RS12665 () | 2705576..2706544 | - | 969 | WP_070382302.1 | WYL domain-containing protein | - |
| vm_RS12670 () | 2706725..2706976 | - | 252 | WP_004724214.1 | hypothetical protein | - |
| vm_RS12675 () | 2707116..2707454 | + | 339 | WP_047110003.1 | DUF1232 domain-containing protein | - |
| vm_RS12680 () | 2707462..2707893 | - | 432 | WP_029848564.1 | DUF2787 domain-containing protein | - |
| vm_RS12685 () | 2707932..2708381 | - | 450 | WP_047110007.1 | DUF2787 domain-containing protein | - |
| vm_RS12690 () | 2708378..2708845 | - | 468 | WP_025787122.1 | DNA repair protein RadC | - |
| vm_RS12695 () | 2708988..2709299 | - | 312 | WP_140328790.1 | IS110 family transposase ISEc45 | Transposase |
| vm_RS21045 () | 2709966..2710334 | - | 369 | WP_081337877.1 | hypothetical protein | - |
| vm_RS12700 () | 2710338..2711651 | - | 1314 | WP_081337878.1 | hypothetical protein | - |
| vm_RS21050 () | 2712055..2712282 | - | 228 | Protein_2430 | IS3 family transposase | - |
| vm_RS12705 () | 2712647..2713747 | + | 1101 | Protein_2431 | ISAs1 family transposase ISXne3 | Transposase |
| vm_RS12710 () | 2713940..2714449 | + | 510 | WP_052767613.1 | hypothetical protein | - |
| vm_RS12715 () | 2714821..2715744 | + | 924 | WP_070382303.1 | hypothetical protein | - |
| vm_RS12720 () | 2715761..2716414 | - | 654 | WP_052767614.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|