MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 127447 bp
Accession: NZ_CP016309 Location: 1..127447 Organism: Vibrio scophthalmi strain VS-12 Replicon: plasmid pVS127
Accession: NZ_CP016309 Location: 1..127447 Organism: Vibrio scophthalmi strain VS-12 Replicon: plasmid pVS127
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VSVS12_RS21380 () | 3..191 | - | 189 | WP_065432096.1 | hypothetical protein | - |
| VSVS12_RS21390 () | 1278..1586 | + | 309 | WP_083181611.1 | hypothetical protein | - |
| VSVS12_RS21395 () | 1551..2664 | - | 1114 | Protein_2 | ISAs1 family transposase ISVha1 | Transposase |
| VSVS12_RS21400 () | 2761..2949 | + | 189 | Protein_3 | single-stranded DNA-binding protein | - |
| VSVS12_RS21405 () | 2965..3198 | + | 234 | WP_006714203.1 | hypothetical protein | - |
| VSVS12_RS21410 () | 3195..3590 | + | 396 | WP_065432098.1 | hypothetical protein | - |
| VSVS12_RS21415 () | 3590..5749 | + | 2160 | WP_065432099.1 | DNA topoisomerase III | - |
| VSVS12_RS21420 () | 5746..6297 | + | 552 | WP_065432100.1 | hypothetical protein | - |
| VSVS12_RS21425 () | 6396..7166 | + | 771 | WP_065432101.1 | GNAT family N-acetyltransferase | - |
| VSVS12_RS21430 () | 7168..7395 | + | 228 | WP_065432102.1 | hypothetical protein | - |
| VSVS12_RS21435 () | 7392..8081 | + | 690 | WP_065432103.1 | hypothetical protein | - |
| VSVS12_RS21440 () | 8078..9715 | + | 1638 | WP_065432104.1 | PcfJ domain-containing protein | - |
| VSVS12_RS21445 () | 9828..10845 | + | 1018 | Protein_12 | IS630 family transposase | - |
| VSVS12_RS21450 () | 11222..12331 | - | 1110 | WP_065432105.1 | extracellular solute-binding protein | - |
| VSVS12_RS21455 () | 12331..13164 | - | 834 | WP_065432205.1 | ABC transporter permease | - |
| VSVS12_RS21460 () | 13236..14105 | - | 870 | WP_065432106.1 | ABC transporter permease | - |
| VSVS12_RS21465 () | 14105..15181 | - | 1077 | WP_065432107.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| VSVS12_RS21470 () | 15370..16200 | + | 831 | WP_065432108.1 | glycerophosphodiester phosphodiesterase | - |
| VSVS12_RS21475 () | 16200..17258 | + | 1059 | WP_065432109.1 | ROK family protein | - |
| VSVS12_RS21480 () | 17394..18404 | + | 1011 | WP_065432110.1 | UDP-glucose 4-epimerase | VF |
| VSVS12_RS21485 () | 18456..19505 | + | 1050 | WP_065432111.1 | UDP-glucose--hexose-1-phosphate uridylyltransferase | - |
| VSVS12_RS21490 () | 19650..20507 | + | 858 | WP_197498458.1 | endonuclease/exonuclease/phosphatase family protein | - |
| VSVS12_RS21495 () | 20554..22011 | - | 1458 | WP_065432113.1 | hypothetical protein | - |
| VSVS12_RS21500 () | 22013..23059 | - | 1047 | WP_065432114.1 | glycerophosphodiester phosphodiesterase family protein | - |
| VSVS12_RS21505 () | 23487..23885 | + | 399 | WP_006712448.1 | hypothetical protein | - |
| VSVS12_RS21510 () | 24026..24577 | + | 552 | WP_065432115.1 | DUF2726 domain-containing protein | - |
| VSVS12_RS21515 () | 24587..24739 | + | 153 | Protein_26 | transcriptional regulator | - |
| VSVS12_RS21520 () | 25164..25571 | + | 408 | WP_065432116.1 | DUF3577 domain-containing protein | - |
| VSVS12_RS21525 () | 25701..26225 | + | 525 | WP_039949226.1 | hypothetical protein | - |
| VSVS12_RS21530 () | 26287..26676 | + | 390 | WP_065432117.1 | hypothetical protein | - |
| VSVS12_RS21535 () | 26750..27079 | + | 330 | WP_065432118.1 | hypothetical protein | - |
| VSVS12_RS21540 () | 27213..27497 | + | 285 | WP_065432119.1 | DUF1640 domain-containing protein | - |
| VSVS12_RS21545 () | 27580..27819 | + | 240 | WP_065432120.1 | hypothetical protein | - |
| VSVS12_RS21550 () | 27988..28902 | + | 915 | WP_065432121.1 | DUF1281 domain-containing protein | - |
| VSVS12_RS21555 () | 28964..29251 | + | 288 | WP_065432122.1 | hypothetical protein | - |
| VSVS12_RS21560 () | 29443..30693 | + | 1251 | WP_065432123.1 | hypothetical protein | VF |
| VSVS12_RS21565 () | 30690..32213 | + | 1524 | WP_065432124.1 | hypothetical protein | - |
| VSVS12_RS21570 () | 32213..33373 | + | 1161 | WP_065432125.1 | hypothetical protein | - |
| VSVS12_RS21575 () | 33370..34047 | + | 678 | WP_065432126.1 | hypothetical protein | - |
| VSVS12_RS21580 () | 34044..35672 | + | 1629 | WP_065432127.1 | Flp pilus assembly complex ATPase component TadA | - |
| VSVS12_RS21585 () | 35656..36648 | + | 993 | WP_065432128.1 | type II secretion system F family protein | - |
| VSVS12_RS21590 () | 36692..37207 | + | 516 | WP_065432129.1 | hypothetical protein | - |
| VSVS12_RS21595 () | 37207..38676 | + | 1470 | WP_065432130.1 | type II secretion system protein | - |
| VSVS12_RS21600 () | 38689..39192 | + | 504 | WP_065432131.1 | hypothetical protein | - |
| VSVS12_RS21605 () | 39246..39461 | + | 216 | WP_065432132.1 | hypothetical protein | - |
| VSVS12_RS21610 () | 39551..40543 | + | 993 | WP_065432133.1 | trypsin-like serine protease | - |
| VSVS12_RS21615 () | 40944..41219 | + | 276 | WP_065432134.1 | HU family DNA-binding protein | - |
| VSVS12_RS21620 () | 41547..42206 | + | 660 | WP_065432135.1 | hypothetical protein | - |
| VSVS12_RS21625 () | 42203..42868 | + | 666 | WP_065432136.1 | TIGR03759 family integrating conjugative element protein | - |
| VSVS12_RS21630 () | 42838..43350 | + | 513 | WP_065432137.1 | hypothetical protein | - |
| VSVS12_RS21635 () | 43360..43764 | + | 405 | WP_065432138.1 | integrating conjugative element protein | - |
| VSVS12_RS21640 () | 43806..44003 | + | 198 | WP_065432139.1 | hypothetical protein | - |
| VSVS12_RS21645 () | 44204..46375 | + | 2172 | WP_083181622.1 | type IV conjugative transfer system coupling protein TraD | - |
| VSVS12_RS21650 () | 46372..47022 | + | 651 | WP_065432140.1 | DUF4400 domain-containing protein | - |
| VSVS12_RS21655 () | 47092..47601 | - | 510 | WP_065432141.1 | hypothetical protein | - |
| VSVS12_RS21660 () | 47639..47917 | - | 279 | WP_065432142.1 | arylsulfatase regulator | - |
| VSVS12_RS21665 () | 48066..48368 | + | 303 | WP_006711819.1 | RAQPRD family integrative conjugative element protein | - |
| VSVS12_RS21670 () | 48365..48625 | + | 261 | WP_065432143.1 | TIGR03758 family integrating conjugative element protein | - |
| VSVS12_RS21675 () | 48622..48966 | + | 345 | WP_006711817.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| VSVS12_RS21680 () | 48971..49300 | + | 330 | WP_065432144.1 | DUF3487 family protein | - |
| VSVS12_RS21685 () | 49311..49724 | + | 414 | WP_006712052.1 | hypothetical protein | - |
| VSVS12_RS21690 () | 49717..50070 | + | 354 | WP_006711814.1 | hypothetical protein | - |
| VSVS12_RS21695 () | 50067..50702 | + | 636 | WP_065432145.1 | TIGR03746 family integrating conjugative element protein | - |
| VSVS12_RS21700 () | 50702..51550 | + | 849 | WP_065432146.1 | TIGR03749 family integrating conjugative element protein | - |
| VSVS12_RS21705 () | 51594..52943 | + | 1350 | WP_156773207.1 | TIGR03752 family integrating conjugative element protein | - |
| VSVS12_RS21710 () | 52930..53343 | + | 414 | WP_065432148.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| VSVS12_RS21715 () | 53343..56057 | + | 2715 | WP_065432149.1 | conjugative transfer ATPase | - |
| VSVS12_RS21720 () | 56054..57022 | + | 969 | WP_065432150.1 | TIGR03756 family integrating conjugative element protein | - |
| VSVS12_RS21725 () | 57039..58298 | + | 1260 | WP_065432151.1 | integrating conjugative element protein | - |
| VSVS12_RS21730 () | 58298..58573 | + | 276 | WP_065432152.1 | hypothetical protein | - |
| VSVS12_RS21735 () | 58567..60159 | + | 1593 | WP_065432153.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| VSVS12_RS21740 () | 60205..60390 | - | 186 | WP_006712145.1 | hypothetical protein | - |
| VSVS12_RS21745 () | 60538..61287 | + | 750 | WP_065432154.1 | NERD domain-containing protein | - |
| VSVS12_RS21755 () | 61728..61997 | - | 270 | WP_065432207.1 | hypothetical protein | - |
| VSVS12_RS21760 () | 62118..62342 | + | 225 | WP_083181635.1 | hypothetical protein | - |
| VSVS12_RS21765 () | 62705..63181 | - | 477 | WP_065432156.1 | hypothetical protein | - |
| VSVS12_RS21770 () | 63191..63538 | - | 348 | WP_065432157.1 | STAS-like domain-containing protein | - |
| VSVS12_RS21775 () | 63540..64634 | - | 1095 | WP_065432158.1 | hypothetical protein | - |
| VSVS12_RS21780 () | 65219..65821 | - | 603 | WP_065432159.1 | tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY | - |
| VSVS12_RS21785 () | 65889..66323 | - | 435 | WP_065432160.1 | recombination regulator RecX | - |
| VSVS12_RS21790 () | 67414..67809 | + | 396 | WP_065432161.1 | hypothetical protein | - |
| VSVS12_RS22895 () | 67802..68014 | + | 213 | WP_083181624.1 | hypothetical protein | - |
| VSVS12_RS21795 () | 68082..68612 | + | 531 | WP_065432162.1 | DNA repair protein RadC | - |
| VSVS12_RS21800 () | 68696..69259 | + | 564 | WP_065432163.1 | DUF3275 family protein | - |
| VSVS12_RS21805 () | 69259..70344 | + | 1086 | WP_065432164.1 | SAM-dependent methyltransferase | - |
| VSVS12_RS21810 () | 70430..71020 | + | 591 | WP_065432165.1 | hypothetical protein | - |
| VSVS12_RS21815 () | 71017..73299 | + | 2283 | WP_065432166.1 | DEAD/DEAH box helicase family protein | - |
| VSVS12_RS21820 () | 73366..73713 | + | 348 | WP_065432167.1 | hypothetical protein | - |
| VSVS12_RS21825 () | 73778..74266 | + | 489 | WP_065432168.1 | DUF957 domain-containing protein | - |
| VSVS12_RS21830 () | 74263..74583 | + | 321 | WP_065432169.1 | hypothetical protein | - |
| VSVS12_RS21835 () | 74602..74787 | + | 186 | WP_065432170.1 | hypothetical protein | - |
| VSVS12_RS21845 () | 75149..76129 | - | 981 | WP_065432172.1 | hypothetical protein | - |
| VSVS12_RS21850 () | 76140..77396 | - | 1257 | WP_065432173.1 | ParA family protein | - |
| VSVS12_RS21855 () | 77943..78785 | - | 843 | WP_065432174.1 | hypothetical protein | - |
| VSVS12_RS21860 () | 79040..79378 | - | 339 | WP_065432175.1 | ISL3 family transposase ISRsp8 | Transposase |
| VSVS12_RS21865 () | 80206..80697 | + | 492 | WP_156773208.1 | hypothetical protein | Relaxase |
| VSVS12_RS21870 () | 80757..81965 | + | 1209 | WP_032073033.1 | IS4 family transposase IS10R | Transposase |
| VSVS12_RS21875 () | 81994..83529 | + | 1536 | WP_065432177.1 | hypothetical protein | Relaxase |
| VSVS12_RS21880 () | 83526..84107 | + | 582 | WP_065432178.1 | hypothetical protein | - |
| VSVS12_RS21885 () | 84076..84744 | + | 669 | WP_065432179.1 | TIGR03761 family integrating conjugative element protein | - |
| VSVS12_RS21890 () | 84765..85754 | + | 990 | WP_065432180.1 | hypothetical protein | - |
| VSVS12_RS21895 () | 86785..87111 | + | 327 | WP_065432181.1 | hypothetical protein | - |
| VSVS12_RS21900 () | 87111..87320 | + | 210 | WP_083181637.1 | hypothetical protein | - |
| VSVS12_RS21905 () | 87295..88116 | + | 822 | WP_156773206.1 | hypothetical protein | - |
| VSVS12_RS21910 () | 88246..88506 | + | 261 | WP_065432184.1 | hypothetical protein | - |
| VSVS12_RS21915 () | 88523..89530 | + | 1008 | WP_065432185.1 | nucleoid-associated protein YejK | - |
| VSVS12_RS21920 () | 90475..90744 | + | 270 | WP_065432186.1 | hypothetical protein | - |
| VSVS12_RS21925 () | 90877..91461 | + | 585 | WP_065432187.1 | DUF2913 family protein | - |
| VSVS12_RS21930 () | 91473..91715 | - | 243 | WP_065432188.1 | DinI-like family protein | - |
| VSVS12_RS23330 () | 91948..92121 | + | 174 | WP_197498457.1 | hypothetical protein | - |
| VSVS12_RS21935 () | 92506..92760 | + | 255 | WP_065432189.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| VSVS12_RS21940 () | 92753..93022 | + | 270 | WP_065432190.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| VSVS12_RS21945 () | 93034..93597 | - | 564 | WP_065432191.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| VSVS12_RS21950 () | 94048..95256 | - | 1209 | WP_065432192.1 | IS256 family transposase ISEc39 | Transposase |
| VSVS12_RS21955 () | 95528..97303 | - | 1776 | WP_065432193.1 | ATP-binding protein | - |
| VSVS12_RS21960 () | 97588..98379 | - | 792 | WP_065432194.1 | IS21 family transposase ISAri1 | Transposase |
| VSVS12_RS21965 () | 98376..99395 | - | 1020 | WP_065432195.1 | IS21 family transposase ISAba8 | Transposase |
| VSVS12_RS21970 () | 100112..100507 | - | 396 | WP_065432196.1 | GspS/AspS pilotin family protein | - |
| VSVS12_RS22900 () | 100750..100908 | + | 159 | WP_083163853.1 | type I toxin-antitoxin system Hok family toxin | - |
| VSVS12_RS21975 () | 101170..102087 | - | 918 | WP_065432197.1 | tyrosine-type recombinase/integrase | - |
| VSVS12_RS21980 () | 102050..102337 | - | 288 | WP_065432097.1 | hypothetical protein | - |
| VSVS12_RS21985 () | 103173..103481 | + | 309 | WP_083181611.1 | hypothetical protein | - |
| VSVS12_RS21990 () | 103446..104567 | - | 1122 | WP_014386692.1 | ISAs1 family transposase ISVha1 | Transposase |
| VSVS12_RS21995 () | 104664..104852 | + | 189 | Protein_123 | single-stranded DNA-binding protein | - |
| VSVS12_RS22000 () | 104868..105101 | + | 234 | WP_006714203.1 | hypothetical protein | - |
| VSVS12_RS22005 () | 105098..105493 | + | 396 | WP_065432098.1 | hypothetical protein | - |
| VSVS12_RS22010 () | 105493..107652 | + | 2160 | WP_065432099.1 | DNA topoisomerase III | - |
| VSVS12_RS22015 () | 107649..108200 | + | 552 | WP_065432100.1 | hypothetical protein | - |
| VSVS12_RS22020 () | 108299..109069 | + | 771 | WP_065432101.1 | GNAT family N-acetyltransferase | - |
| VSVS12_RS22025 () | 109071..109298 | + | 228 | WP_065432102.1 | hypothetical protein | - |
| VSVS12_RS22030 () | 109295..109984 | + | 690 | WP_065432103.1 | hypothetical protein | - |
| VSVS12_RS22035 () | 109981..111618 | + | 1638 | WP_065432104.1 | PcfJ domain-containing protein | - |
| VSVS12_RS22040 () | 111731..112748 | + | 1018 | Protein_132 | IS630 family transposase | - |
| VSVS12_RS22045 () | 113141..114235 | - | 1095 | WP_065432198.1 | extracellular solute-binding protein | - |
| VSVS12_RS22050 () | 114235..115068 | - | 834 | WP_065432205.1 | ABC transporter permease | - |
| VSVS12_RS22055 () | 115140..116009 | - | 870 | WP_065432106.1 | ABC transporter permease | - |
| VSVS12_RS22060 () | 116009..117085 | - | 1077 | WP_065432107.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| VSVS12_RS22065 () | 117274..118104 | + | 831 | WP_065432108.1 | glycerophosphodiester phosphodiesterase | - |
| VSVS12_RS22070 () | 118104..119162 | + | 1059 | WP_065432109.1 | ROK family protein | - |
| VSVS12_RS22075 () | 119298..120308 | + | 1011 | WP_065432110.1 | UDP-glucose 4-epimerase | VF |
| VSVS12_RS22080 () | 120360..121409 | + | 1050 | WP_065432111.1 | UDP-glucose--hexose-1-phosphate uridylyltransferase | - |
| VSVS12_RS22085 () | 121554..122411 | + | 858 | WP_197498458.1 | endonuclease/exonuclease/phosphatase family protein | - |
| VSVS12_RS22090 () | 122458..123192 | - | 735 | WP_065432199.1 | hypothetical protein | - |
| VSVS12_RS22095 () | 123177..123632 | - | 456 | WP_197498459.1 | hypothetical protein | - |
| VSVS12_RS22100 () | 123734..123913 | - | 180 | WP_065432201.1 | hypothetical protein | - |
| VSVS12_RS22105 () | 123915..124151 | - | 237 | WP_065432202.1 | hypothetical protein | - |
| VSVS12_RS22110 () | 124144..124959 | - | 816 | WP_065432203.1 | glycerophosphodiester phosphodiesterase family protein | - |
| VSVS12_RS22115 () | 127019..127432 | + | 414 | WP_065432204.1 | DUF3577 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|