MGE detailed information
MGE type: Prophage MGE length: 67894 bp
Accession: NZ_CP016303 Location: 474278..542171 Organism: Candidatus Hamiltonella defensa (Bemisia tabaci) strain MEAM1 Replicon: chromosome
Accession: NZ_CP016303 Location: 474278..542171 Organism: Candidatus Hamiltonella defensa (Bemisia tabaci) strain MEAM1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BA171_RS02195 () | 469778..471703 | - | 1926 | WP_095591342.1 | ATP-dependent zinc metalloprotease FtsH | - |
| BA171_RS02200 () | 471763..472389 | - | 627 | WP_029588995.1 | 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE | - |
| BA171_RS02205 () | 472541..473017 | - | 477 | WP_015874311.1 | transcription elongation factor GreA | - |
| BA171_RS02210 () | 473432..474262 | + | 831 | WP_016857215.1 | co-chaperone DjlA | - |
| BA171_RS02215 () | 474278..474769 | - | 492 | WP_016857214.1 | YajQ family cyclic di-GMP-binding protein | - |
| BA171_RS02220 () | 475070..476473 | - | 1404 | WP_016857213.1 | CyaA/EF/ExoY family adenylyl cyclase toxin | - |
| BA171_RS02225 () | 477047..477592 | - | 546 | WP_016857212.1 | hypothetical protein | - |
| BA171_RS02230 () | 477750..478001 | - | 252 | WP_130651582.1 | hypothetical protein | - |
| BA171_RS02240 () | 478150..478278 | + | 129 | Protein_433 | exonuclease | - |
| BA171_RS02245 () | 478393..478878 | + | 486 | Protein_434 | thermonuclease family protein | - |
| BA171_RS02255 () | 479765..479911 | + | 147 | WP_016857206.1 | hypothetical protein | - |
| BA171_RS02260 () | 480010..481203 | - | 1194 | WP_095591343.1 | tyrosine-type recombinase/integrase | - |
| BA171_RS02265 () | 481178..481405 | - | 228 | WP_046493225.1 | hypothetical protein | - |
| BA171_RS02270 () | 481699..481983 | - | 285 | Protein_438 | DUF669 domain-containing protein | - |
| BA171_RS02275 () | 481980..482663 | - | 684 | WP_095591344.1 | ATP-binding protein | - |
| BA171_RS02280 () | 483033..483353 | + | 321 | WP_046493232.1 | hypothetical protein | - |
| BA171_RS02285 () | 483358..483621 | - | 264 | WP_157727289.1 | hypothetical protein | - |
| BA171_RS02290 () | 483868..484518 | - | 651 | WP_095591345.1 | helix-turn-helix domain-containing protein | - |
| BA171_RS02295 () | 484618..484842 | + | 225 | WP_059108296.1 | hypothetical protein | - |
| BA171_RS02300 () | 484892..485374 | + | 483 | WP_050879637.1 | hypothetical protein | - |
| BA171_RS02305 () | 485328..486152 | + | 825 | WP_016858006.1 | ash family protein | - |
| BA171_RS02310 () | 486298..487203 | + | 906 | WP_046493793.1 | replication protein | - |
| BA171_RS02315 () | 487200..488057 | + | 858 | WP_046493792.1 | ATP-binding protein | - |
| BA171_RS02320 () | 488269..489012 | - | 744 | WP_016858231.1 | pentapeptide repeat-containing protein | - |
| BA171_RS02325 () | 489318..489527 | + | 210 | WP_016858045.1 | hypothetical protein | - |
| BA171_RS02330 () | 489823..490146 | - | 324 | WP_046493493.1 | hypothetical protein | - |
| BA171_RS02335 () | 490478..490657 | + | 180 | WP_046493898.1 | hypothetical protein | - |
| BA171_RS02345 () | 491279..496644 | + | 5366 | Protein_452 | hypothetical protein | - |
| BA171_RS02350 () | 496800..497816 | - | 1017 | WP_016857815.1 | RNA polymerase sigma factor RpoS | - |
| BA171_RS02355 () | 497871..498788 | - | 918 | WP_198303393.1 | murein hydrolase activator NlpD | - |
| BA171_RS02360 () | 498841..499314 | - | 474 | WP_029589093.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| BA171_RS02365 () | 499335..500060 | - | 726 | WP_016857812.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| BA171_RS02370 () | 500063..500377 | - | 315 | WP_016857811.1 | cell division protein FtsB | - |
| BA171_RS02375 () | 500505..500885 | + | 381 | WP_016857810.1 | 6-carboxytetrahydropterin synthase QueD | - |
| BA171_RS02380 () | 500895..501464 | - | 570 | WP_016857809.1 | Sua5/YciO/YrdC/YwlC family protein | - |
| BA171_RS02385 () | 501482..502576 | - | 1095 | WP_095591346.1 | DNA-protecting protein DprA | - |
| BA171_RS02390 () | 502715..503773 | - | 1059 | WP_046493065.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| BA171_RS02395 () | 503748..503975 | - | 228 | WP_046493225.1 | hypothetical protein | - |
| BA171_RS02400 () | 504076..504525 | - | 450 | WP_052734995.1 | antA/AntB antirepressor family protein | - |
| BA171_RS02405 () | 504699..505346 | - | 648 | WP_016857985.1 | thermonuclease family protein | - |
| BA171_RS02410 () | 505374..506027 | - | 654 | WP_046493236.1 | YqaJ viral recombinase family protein | - |
| BA171_RS02415 () | 506045..506620 | - | 576 | WP_016857986.1 | hypothetical protein | - |
| BA171_RS02420 () | 506617..507301 | - | 685 | Protein_467 | ATP-binding protein | - |
| BA171_RS02425 () | 507670..508077 | + | 408 | WP_095591347.1 | DUF1640 domain-containing protein | - |
| BA171_RS02430 () | 508082..508363 | - | 282 | WP_157727291.1 | hypothetical protein | - |
| BA171_RS02435 () | 508844..509440 | - | 597 | WP_040056181.1 | helix-turn-helix domain-containing protein | - |
| BA171_RS02440 () | 509549..509773 | + | 225 | WP_029589125.1 | helix-turn-helix domain-containing protein | - |
| BA171_RS02445 () | 509848..510330 | + | 483 | WP_050879637.1 | hypothetical protein | - |
| BA171_RS02450 () | 510466..511107 | + | 642 | WP_198303390.1 | ash family protein | - |
| BA171_RS08645 () | 511109..511261 | + | 153 | WP_016858005.1 | hypothetical protein | - |
| BA171_RS02455 () | 511254..512159 | + | 906 | WP_046493793.1 | replication protein | - |
| BA171_RS02460 () | 512156..513007 | + | 852 | WP_095591349.1 | ATP-binding protein | - |
| BA171_RS02465 () | 513004..513213 | + | 210 | WP_046493771.1 | hypothetical protein | - |
| BA171_RS02470 () | 513210..513590 | + | 381 | WP_046493753.1 | RusA family crossover junction endodeoxyribonuclease | - |
| BA171_RS02475 () | 513587..513925 | + | 339 | WP_046493754.1 | hypothetical protein | - |
| BA171_RS02480 () | 514067..514312 | + | 246 | WP_016858311.1 | hypothetical protein | - |
| BA171_RS02485 () | 514693..515091 | - | 399 | WP_095591350.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BA171_RS02490 () | 515091..515327 | - | 237 | WP_016858197.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| BA171_RS02495 () | 515444..515626 | - | 183 | WP_046493773.1 | hypothetical protein | - |
| BA171_RS02500 () | 515650..516732 | + | 1083 | Protein_484 | site-specific DNA-methyltransferase | - |
| BA171_RS02505 () | 516803..516991 | + | 189 | WP_015873507.1 | phage holin family protein | - |
| BA171_RS02510 () | 516988..517485 | + | 498 | WP_046493798.1 | lysozyme | - |
| BA171_RS02515 () | 517588..517860 | + | 273 | WP_052735024.1 | glycoside hydrolase family protein | - |
| BA171_RS02520 () | 517946..518425 | + | 480 | WP_052735025.1 | lysis protein | - |
| BA171_RS02525 () | 518487..518846 | + | 360 | WP_029589155.1 | HNH endonuclease | - |
| BA171_RS02530 () | 519024..519492 | + | 469 | Protein_490 | phage terminase small subunit P27 family | - |
| BA171_RS02535 () | 519443..521191 | + | 1749 | Protein_491 | terminase large subunit | - |
| BA171_RS02540 () | 521191..522429 | + | 1239 | WP_095591325.1 | phage portal protein | - |
| BA171_RS02545 () | 522532..523389 | + | 858 | WP_095591351.1 | Clp protease ClpP | - |
| BA171_RS02550 () | 523402..524688 | + | 1287 | WP_016858055.1 | phage major capsid protein | - |
| BA171_RS02555 () | 524739..524948 | + | 210 | WP_082665831.1 | head-tail connector protein | - |
| BA171_RS02560 () | 525049..525432 | + | 384 | WP_016858053.1 | phage head closure protein | - |
| BA171_RS02565 () | 525419..525946 | + | 528 | WP_016858052.1 | hypothetical protein | - |
| BA171_RS02570 () | 525943..526386 | + | 444 | WP_059108330.1 | hypothetical protein | - |
| BA171_RS08650 () | 526426..526572 | + | 147 | Protein_499 | DUF2635 domain-containing protein | - |
| BA171_RS02580 () | 526857..528356 | + | 1500 | WP_095591353.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| BA171_RS02585 () | 528356..528712 | + | 357 | WP_059108327.1 | phage tail tube protein | - |
| BA171_RS02590 () | 528709..529062 | + | 354 | WP_095591354.1 | phage tail assembly protein | - |
| BA171_RS02595 () | 529117..530985 | + | 1869 | WP_095591355.1 | phage tail tape measure protein | - |
| BA171_RS02600 () | 530992..532309 | + | 1318 | Protein_504 | DNA circularization N-terminal domain-containing protein | - |
| BA171_RS02605 () | 532306..533359 | + | 1054 | Protein_505 | baseplate protein | - |
| BA171_RS02610 () | 533404..533967 | + | 564 | WP_198303384.1 | phage baseplate assembly protein V | - |
| BA171_RS02615 () | 533972..534379 | + | 408 | WP_095591323.1 | phage GP46 family protein | - |
| BA171_RS02620 () | 534369..535438 | + | 1070 | Protein_508 | baseplate J/gp47 family protein | - |
| BA171_RS02625 () | 535428..536026 | + | 599 | Protein_509 | DUF2313 domain-containing protein | - |
| BA171_RS02630 () | 536283..536906 | + | 624 | WP_095591406.1 | phage tail protein | - |
| BA171_RS02635 () | 537080..537526 | + | 447 | WP_095591356.1 | hypothetical protein | - |
| BA171_RS08465 () | 537507..537659 | - | 153 | WP_157727293.1 | hypothetical protein | - |
| BA171_RS02640 () | 537659..538864 | - | 1206 | WP_095591357.1 | DNA (cytosine-5-)-methyltransferase | - |
| BA171_RS08655 () | 538828..538974 | + | 147 | WP_198303396.1 | hypothetical protein | - |
| BA171_RS02645 () | 539326..539913 | + | 588 | WP_095591358.1 | peptide deformylase | - |
| BA171_RS02650 () | 539923..540882 | + | 960 | WP_016856947.1 | methionyl-tRNA formyltransferase | - |
| BA171_RS02655 () | 540882..542171 | + | 1290 | WP_095591359.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| BA171_RS02660 () | 542189..543565 | + | 1377 | WP_016856945.1 | Trk system potassium transporter TrkA | - |
| BA171_RS02665 () | 543630..545933 | + | 2304 | WP_016856944.1 | RNA-binding transcriptional accessory protein | - |
| BA171_RS02670 () | 545955..546451 | + | 497 | Protein_520 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|