MGE detailed information
MGE type: Prophage MGE length: 33072 bp
Accession: NZ_CP016182 Location: 2606190..2639261 Organism: Escherichia coli strain EC590 Replicon: chromosome
Accession: NZ_CP016182 Location: 2606190..2639261 Organism: Escherichia coli strain EC590 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAY41_RS13240 () | 2603188..2605614 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| BAY41_RS13245 () | 2605813..2606118 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| BAY41_RS13250 () | 2606226..2606936 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| BAY41_RS13255 () | 2606939..2607499 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| BAY41_RS13260 () | 2607534..2607875 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| BAY41_RS13265 () | 2608010..2608336 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| BAY41_RS13275 () | 2608542..2609756 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| BAY41_RS13280 () | 2609768..2610787 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| BAY41_RS13285 () | 2610845..2610955 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| BAY41_RS13290 () | 2610975..2612255 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| BAY41_RS13295 () | 2612290..2612541 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| BAY41_RS13300 () | 2612614..2614323 | - | 1710 | Protein_2427 | 3'-5' exoribonuclease | - |
| BAY41_RS24600 () | 2614311..2614568 | + | 258 | Protein_2428 | hypothetical protein | - |
| BAY41_RS13310 () | 2614609..2615031 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| BAY41_RS13315 () | 2615028..2615384 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| BAY41_RS13320 () | 2615904..2617439 | - | 1536 | WP_001333339.1 | IS66 family transposase ISEc22 | Transposase |
| BAY41_RS13325 () | 2617488..2617721 | - | 234 | WP_001341330.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| BAY41_RS13330 () | 2617769..2617867 | - | 99 | Protein_2433 | IS66 family transposase ISEc22 | Transposase |
| BAY41_RS24605 () | 2618089..2618376 | + | 288 | Protein_2434 | hypothetical protein | - |
| BAY41_RS13350 () | 2619145..2620458 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| BAY41_RS13355 () | 2620895..2621227 | - | 333 | WP_001301033.1 | protein FlxA | - |
| BAY41_RS13360 () | 2621430..2621735 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| BAY41_RS13365 () | 2621760..2621999 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| BAY41_RS13370 () | 2621999..2622286 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| BAY41_RS13375 () | 2622358..2622513 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| BAY41_RS13380 () | 2622730..2622981 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| BAY41_RS13385 () | 2623048..2623326 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| BAY41_RS13390 () | 2623328..2624377 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| BAY41_RS13395 () | 2624391..2625143 | + | 753 | WP_001047135.1 | antitermination protein | - |
| BAY41_RS24390 () | 2625421..2625510 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| BAY41_RS13400 () | 2625565..2625777 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| BAY41_RS13405 () | 2626078..2626293 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| BAY41_RS24735 () | 2626657..2626827 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| BAY41_RS13410 () | 2627047..2627262 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| BAY41_RS13415 () | 2627267..2627578 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| BAY41_RS13420 () | 2627575..2628108 | + | 534 | WP_001092971.1 | lysozyme | - |
| BAY41_RS13425 () | 2628105..2628602 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| BAY41_RS13430 () | 2628965..2629177 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| BAY41_RS13435 () | 2629188..2629376 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| BAY41_RS24395 () | 2629379..2629444 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| BAY41_RS24400 () | 2629524..2629679 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| BAY41_RS13445 () | 2629851..2630024 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| BAY41_RS13450 () | 2630176..2630586 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| BAY41_RS13455 () | 2630644..2630877 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| BAY41_RS13465 () | 2631266..2631811 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| BAY41_RS24610 () | 2631786..2632835 | + | 1050 | Protein_2461 | phage terminase large subunit family protein | - |
| BAY41_RS24615 () | 2632857..2633591 | + | 735 | Protein_2462 | tail fiber protein | - |
| BAY41_RS13475 () | 2633591..2634166 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| BAY41_RS13480 () | 2634264..2634854 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| BAY41_RS13485 () | 2635171..2635404 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| BAY41_RS24405 () | 2635473..2635586 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| BAY41_RS13490 () | 2636107..2637474 | + | 1368 | Protein_2467 | MHS family MFS transporter | - |
| BAY41_RS13495 () | 2637563..2639023 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| BAY41_RS13500 () | 2639058..2639261 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| BAY41_RS13505 () | 2639438..2640124 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| BAY41_RS13510 () | 2640213..2640959 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| BAY41_RS13520 () | 2641096..2643141 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| BAY41_RS13525 () | 2643185..2643703 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|