MGE detailed information
MGE type: Prophage MGE length: 8721 bp
Accession: NZ_CP016102 Location: 2816694..2825414 Organism: Clostridioides difficile strain DSM 29627 Replicon: chromosome
Accession: NZ_CP016102 Location: 2816694..2825414 Organism: Clostridioides difficile strain DSM 29627 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDIF29627_RS13375 () | 2811890..2813107 | - | 1218 | WP_003431029.1 | threonine ammonia-lyase | - |
| CDIF29627_RS13380 () | 2813765..2815393 | + | 1629 | WP_003431030.1 | aspartate 4-decarboxylase | - |
| CDIF29627_RS13385 () | 2815514..2816509 | + | 996 | WP_003431031.1 | asparaginase | - |
| CDIF29627_RS13390 () | 2816694..2817077 | - | 384 | WP_003431032.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| CDIF29627_RS13395 () | 2817457..2817633 | + | 177 | WP_003431033.1 | hypothetical protein | - |
| CDIF29627_RS13400 () | 2817859..2818059 | + | 201 | WP_003431034.1 | cold-shock protein | - |
| CDIF29627_RS13405 () | 2818490..2819827 | + | 1338 | WP_003431035.1 | ATP-binding protein | - |
| CDIF29627_RS13410 () | 2819870..2820451 | + | 582 | WP_003431036.1 | accessory gene regulator B family protein | - |
| CDIF29627_RS13415 () | 2820469..2820630 | + | 162 | WP_003431037.1 | cyclic lactone autoinducer peptide | - |
| CDIF29627_RS13420 () | 2820652..2821449 | - | 798 | WP_003431038.1 | N-acetylmuramoyl-L-alanine amidase | - |
| CDIF29627_RS13425 () | 2821446..2821706 | - | 261 | WP_003431039.1 | phage holin family protein | - |
| - () | 2822656..2822790 | + | 135 | NuclAT_2 | - | Antitoxin Detail |
| CDIF29627_RS13430 () | 2822707..2822865 | - | 159 | WP_003431040.1 | hypothetical protein | Toxin Detail |
| CDIF29627_RS13435 () | 2823223..2824593 | - | 1371 | WP_003431041.1 | N-acetylmuramoyl-L-alanine amidase LytC | VF |
| CDIF29627_RS13440 () | 2824875..2824973 | + | 99 | Protein_2522 | Arm DNA-binding domain-containing protein | - |
| CDIF29627_RS13445 () | 2824992..2825414 | + | 423 | WP_003431042.1 | hypothetical protein | - |
| CDIF29627_RS13450 () | 2825732..2825917 | + | 186 | WP_107615967.1 | tyrosine-type recombinase/integrase | - |
| CDIF29627_RS13455 () | 2826280..2826360 | - | 81 | Protein_2525 | VOC family protein | - |
| CDIF29627_RS13460 () | 2826400..2827068 | - | 669 | WP_003431044.1 | VanZ family protein | - |
| CDIF29627_RS13465 () | 2827167..2827550 | - | 384 | WP_071599195.1 | helix-turn-helix transcriptional regulator | - |
| CDIF29627_RS13470 () | 2827950..2830370 | - | 2421 | WP_003431046.1 | leucine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|