MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 69156 bp
Accession: NZ_CP016019 Location: 1401892..1471047 Organism: Bifidobacterium longum subsp. longum strain AH1206 Replicon: chromosome
Accession: NZ_CP016019 Location: 1401892..1471047 Organism: Bifidobacterium longum subsp. longum strain AH1206 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BL1206_RS06375 () | 1397133..1399457 | - | 2325 | WP_014485569.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
| BL1206_RS06380 () | 1399591..1400067 | - | 477 | WP_007055963.1 | dUTP diphosphatase | - |
| BL1206_RS06385 () | 1400067..1400360 | - | 294 | WP_007052669.1 | DUF4193 domain-containing protein | - |
| BL1206_RS06390 () | 1400519..1401610 | + | 1092 | WP_007056777.1 | DUF3071 domain-containing protein | - |
| BL1206_RS06395 () | 1401620..1402888 | - | 1269 | WP_007054496.1 | alkaline phosphatase family protein | - |
| BL1206_RS06400 () | 1403139..1405862 | + | 2724 | WP_069483847.1 | DNA topoisomerase IV subunit A | - |
| BL1206_RS06405 () | 1406007..1406795 | + | 789 | WP_007054494.1 | Transcriptional regulatory protein TcrA | VF |
| BL1206_RS06410 () | 1406806..1411539 | - | 4734 | WP_069483848.1 | DEAD/DEAH box helicase | - |
| BL1206_RS06415 () | 1411555..1412547 | - | 993 | WP_069483849.1 | ribokinase | - |
| BL1206_RS06420 () | 1412591..1413817 | - | 1227 | WP_023658425.1 | MFS transporter | - |
| BL1206_RS06425 () | 1413984..1416260 | - | 2277 | WP_010080760.1 | type IIA DNA topoisomerase subunit B | - |
| BL1206_RS06430 () | 1416318..1417742 | - | 1425 | WP_007055162.1 | RNA polymerase principal sigma factor HrdB | VF |
| BL1206_RS06435 () | 1417945..1418607 | - | 663 | WP_069483850.1 | DUF4192 family protein | - |
| BL1206_RS06440 () | 1418814..1419896 | + | 1083 | WP_069483851.1 | polyprenyl synthetase family protein | - |
| BL1206_RS06445 () | 1420040..1422313 | + | 2274 | WP_015512155.1 | Serine/threonine-protein kinase PK-1 | VF |
| BL1206_RS06450 () | 1422365..1423069 | - | 705 | WP_021975593.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| BL1206_RS06455 () | 1423130..1423825 | + | 696 | WP_007054485.1 | hypothetical protein | - |
| BL1206_RS11340 () | 1423979..1424167 | - | 189 | WP_007054484.1 | hypothetical protein | - |
| BL1206_RS06460 () | 1424214..1425260 | - | 1047 | WP_011068039.1 | anthranilate phosphoribosyltransferase | - |
| BL1206_RS06470 () | 1425850..1426203 | + | 354 | WP_010080769.1 | ISL3 family transposase ISTesp2 | Transposase |
| BL1206_RS06475 () | 1426514..1429408 | - | 2895 | WP_007055154.1 | preprotein translocase subunit SecA | - |
| BL1206_RS06480 () | 1429570..1430232 | - | 663 | WP_007052648.1 | ribosome-associated translation inhibitor RaiA | - |
| BL1206_RS06490 () | 1431109..1431702 | - | 594 | WP_013140878.1 | RecX family transcriptional regulator | - |
| BL1206_RS06495 () | 1431705..1432898 | - | 1194 | WP_013140879.1 | recombinase RecA | - |
| BL1206_RS10915 () | 1433199..1433432 | - | 234 | WP_007052642.1 | DUF3046 domain-containing protein | - |
| BL1206_RS06505 () | 1433544..1434059 | - | 516 | WP_007052641.1 | helix-turn-helix transcriptional regulator | - |
| BL1206_RS06510 () | 1434119..1434652 | - | 534 | WP_007052640.1 | CinA family protein | - |
| BL1206_RS06515 () | 1434664..1435299 | - | 636 | WP_069483852.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| BL1206_RS06520 () | 1435476..1438385 | - | 2910 | WP_007052638.1 | DNA translocase FtsK | - |
| BL1206_RS06525 () | 1438597..1439346 | + | 750 | WP_007056215.1 | putative adenosine monophosphate-protein transferase fic | VF |
| BL1206_RS06530 () | 1439380..1440366 | - | 987 | WP_007052636.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| BL1206_RS06535 () | 1440377..1441831 | - | 1455 | WP_007052635.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| BL1206_RS06540 () | 1441963..1442703 | + | 741 | WP_007056209.1 | GTP pyrophosphokinase YwaC | VF |
| BL1206_RS06545 () | 1442736..1443752 | - | 1017 | WP_007052632.1 | DMT family transporter | - |
| BL1206_RS06550 () | 1443892..1444791 | - | 900 | WP_007052631.1 | Bax inhibitor-1/YccA family protein | - |
| BL1206_RS06555 () | 1444972..1445817 | - | 846 | WP_007057205.1 | DUF5067 domain-containing protein | - |
| BL1206_RS06560 () | 1446152..1447384 | + | 1233 | WP_007056207.1 | sensor histidine kinase | - |
| BL1206_RS06565 () | 1447419..1448144 | + | 726 | WP_007056206.1 | Transcriptional regulatory protein LiaR | VF |
| BL1206_RS06570 () | 1448184..1448825 | + | 642 | WP_007052627.1 | GNAT family N-acetyltransferase | - |
| BL1206_RS06575 () | 1448915..1451020 | + | 2106 | WP_069483853.1 | DUF262 domain-containing protein | - |
| BL1206_RS06580 () | 1451070..1451561 | - | 492 | WP_007057208.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BL1206_RS06585 () | 1451558..1451950 | - | 393 | WP_069483854.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BL1206_RS06590 () | 1452095..1454794 | - | 2700 | WP_007057211.1 | aconitate hydratase AcnA | - |
| BL1206_RS06595 () | 1454915..1457428 | - | 2514 | WP_069483855.1 | HAD-IC family P-type ATPase | - |
| BL1206_RS06600 () | 1457519..1458214 | - | 696 | WP_023658436.1 | hypothetical protein | - |
| BL1206_RS06605 () | 1458226..1459494 | - | 1269 | WP_007055251.1 | class I SAM-dependent RNA methyltransferase | - |
| BL1206_RS06610 () | 1459484..1460242 | - | 759 | WP_008783114.1 | DUF3159 domain-containing protein | - |
| BL1206_RS06615 () | 1460258..1461112 | - | 855 | WP_061870388.1 | DUF3710 domain-containing protein | - |
| BL1206_RS06620 () | 1461237..1462097 | + | 861 | WP_007052617.1 | exodeoxyribonuclease III | - |
| BL1206_RS06625 () | 1462406..1464415 | - | 2010 | WP_008783117.1 | Glutathione import ATP-binding protein GsiA | VF |
| BL1206_RS06630 () | 1464438..1465442 | - | 1005 | WP_022527682.1 | ABC transporter permease | - |
| BL1206_RS06635 () | 1465461..1466387 | - | 927 | WP_003832137.1 | ABC transporter permease | - |
| BL1206_RS06640 () | 1466688..1468327 | - | 1640 | Protein_1295 | ABC transporter substrate-binding protein | - |
| BL1206_RS06645 () | 1468580..1469647 | - | 1068 | WP_008783120.1 | Tyrosine recombinase XerC | VF |
| BL1206_RS06650 () | 1469682..1469939 | - | 258 | WP_007052610.1 | hypothetical protein | - |
| BL1206_RS06655 () | 1470149..1471252 | - | 1104 | WP_081040148.1 | prephenate dehydrogenase/arogenate dehydrogenase family protein | - |
| BL1206_RS06660 () | 1471210..1472187 | - | 978 | WP_008783121.1 | chorismate mutase | - |
| BL1206_RS06665 () | 1472263..1472709 | - | 447 | WP_007052607.1 | alcohol dehydrogenase | - |
| BL1206_RS06670 () | 1472809..1474740 | - | 1932 | WP_007052606.1 | translational GTPase TypA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|