MGE detailed information
MGE type: Prophage MGE length: 35113 bp
Accession: NZ_CP016018 Location: 3562295..3597407 Organism: Escherichia coli strain ER1821R Replicon: chromosome
Accession: NZ_CP016018 Location: 3562295..3597407 Organism: Escherichia coli strain ER1821R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9X67_RS17635 () | 3557429..3558385 | + | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| A9X67_RS17640 () | 3558382..3560580 | + | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| A9X67_RS17645 () | 3560590..3561546 | + | 957 | WP_000121347.1 | molybdenum cofactor insertion chaperone PaoD | - |
| A9X67_RS17650 () | 3561597..3561935 | + | 339 | Protein_3369 | LysR family transcriptional regulator | - |
| A9X67_RS17660 () | 3562220..3563620 | + | 1401 | WP_001407714.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| A9X67_RS17665 () | 3563737..3564177 | + | 441 | WP_000224818.1 | hypothetical protein | - |
| A9X67_RS25470 () | 3564174..3564242 | + | 69 | Protein_3372 | DNA-binding protein | - |
| A9X67_RS17670 () | 3564303..3565283 | + | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| A9X67_RS24120 () | 3565439..3565597 | + | 159 | WP_071819598.1 | DNA-binding protein | - |
| A9X67_RS17675 () | 3565716..3566570 | + | 855 | WP_000072039.1 | hypothetical protein | - |
| A9X67_RS17680 () | 3566597..3567295 | + | 699 | WP_001214248.1 | recombinase family protein | - |
| A9X67_RS17685 () | 3567567..3568193 | + | 627 | WP_000860996.1 | inovirus Gp2 family protein | - |
| A9X67_RS17690 () | 3568284..3569114 | - | 831 | Protein_3378 | type III restriction endonuclease subunit R | - |
| A9X67_RS17695 () | 3569169..3569866 | + | 698 | Protein_3379 | IS1 family transposase IS1R | Transposase |
| A9X67_RS24130 () | 3569883..3570086 | - | 204 | Protein_3380 | DUF3987 domain-containing protein | - |
| A9X67_RS25830 () | 3570145..3570240 | + | 96 | WP_211180486.1 | putative translational regulatory protein ArgL | - |
| A9X67_RS17700 () | 3570210..3571214 | + | 1005 | WP_001281824.1 | Ornithine carbamoyltransferase, catabolic | VF |
| A9X67_RS17705 () | 3571353..3572111 | + | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
| A9X67_RS17710 () | 3572116..3573726 | - | 1611 | WP_000406871.1 | glycoside hydrolase family 43 protein | - |
| A9X67_RS17715 () | 3573738..3575120 | - | 1383 | WP_000192862.1 | MFS transporter | - |
| A9X67_RS17720 () | 3575347..3577314 | - | 1968 | WP_000151259.1 | xylonate dehydratase YagF | - |
| A9X67_RS17725 () | 3577329..3578237 | - | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| A9X67_RS17730 () | 3578532..3579686 | + | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| A9X67_RS17735 () | 3579780..3580130 | + | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| A9X67_RS17740 () | 3580153..3580401 | + | 249 | Protein_3390 | IS3 family transposase ISEhe3 | Transposase |
| A9X67_RS24135 () | 3580411..3580584 | - | 174 | Protein_3391 | IS30 family transposase | - |
| A9X67_RS17745 () | 3580640..3581337 | + | 698 | Protein_3392 | IS1 family transposase IS1R | Transposase |
| A9X67_RS17750 () | 3581354..3581701 | + | 348 | Protein_3393 | ABC transporter permease subunit | - |
| A9X67_RS17755 () | 3581713..3582759 | + | 1047 | WP_000192349.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| A9X67_RS17760 () | 3582868..3583800 | - | 933 | WP_000081351.1 | homocysteine S-methyltransferase | - |
| A9X67_RS17765 () | 3583787..3585190 | - | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| A9X67_RS17770 () | 3585434..3586414 | + | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| A9X67_RS17775 () | 3586562..3587653 | - | 1092 | Protein_3398 | group II intron reverse transcriptase/maturase | - |
| A9X67_RS17790 () | 3588326..3588751 | - | 426 | Protein_3399 | IS3 family transposase | - |
| A9X67_RS17795 () | 3588761..3589912 | - | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| A9X67_RS17800 () | 3589980..3590237 | - | 258 | Protein_3401 | IS3 family transposase ISEc52 | Transposase |
| A9X67_RS17805 () | 3590333..3591226 | + | 894 | WP_000770246.1 | LysR family transcriptional regulator | - |
| A9X67_RS17810 () | 3591555..3592418 | + | 864 | WP_001065553.1 | GTPase family protein | - |
| A9X67_RS17815 () | 3592510..3593331 | + | 822 | WP_000197389.1 | DUF945 domain-containing protein | - |
| A9X67_RS25480 () | 3593548..3593739 | + | 192 | Protein_3405 | DeoR family transcriptional regulator | - |
| A9X67_RS25485 () | 3593735..3593962 | + | 228 | WP_001548158.1 | hypothetical protein | - |
| A9X67_RS25490 () | 3593962..3594405 | + | 444 | WP_000824223.1 | hypothetical protein | - |
| A9X67_RS17830 () | 3594428..3594895 | + | 468 | WP_001547765.1 | hypothetical protein | - |
| A9X67_RS17835 () | 3594972..3595211 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| A9X67_RS17840 () | 3595309..3595767 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| A9X67_RS17845 () | 3595783..3596259 | + | 477 | WP_000811693.1 | RadC family protein | - |
| A9X67_RS24165 () | 3596268..3596489 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| A9X67_RS17850 () | 3596508..3596825 | + | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| A9X67_RS17855 () | 3596846..3597187 | + | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| A9X67_RS17865 () | 3597759..3599012 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| A9X67_RS17870 () | 3599024..3600127 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| A9X67_RS17875 () | 3600415..3601470 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| A9X67_RS17880 () | 3601509..3601910 | - | 402 | WP_000174689.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|