MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 67730 bp
Accession: NZ_CP016011 Location: 1..67730 Organism: Salmonella enterica subsp. enterica serovar Newport strain CFSAN001660 Replicon: plasmid pCFSAN001660
Accession: NZ_CP016011 Location: 1..67730 Organism: Salmonella enterica subsp. enterica serovar Newport strain CFSAN001660 Replicon: plasmid pCFSAN001660
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A8179_RS24560 () | 453..743 | - | 291 | WP_001266178.1 | hypothetical protein | - |
| A8179_RS24565 () | 745..1050 | - | 306 | WP_001159874.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| A8179_RS24570 () | 1052..1270 | - | 219 | WP_000813642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| A8179_RS24575 () | 1980..2225 | + | 246 | WP_000368362.1 | hypothetical protein | - |
| A8179_RS24580 () | 2230..3192 | + | 963 | WP_000169858.1 | hypothetical protein | - |
| A8179_RS24585 () | 4860..5354 | + | 495 | WP_000786171.1 | hypothetical protein | - |
| A8179_RS24590 () | 5484..5981 | + | 498 | WP_000526848.1 | hypothetical protein | - |
| A8179_RS24595 () | 6056..6796 | + | 741 | WP_000691919.1 | pili assembly chaperone SafB | - |
| A8179_RS24600 () | 6820..9330 | + | 2511 | WP_000669312.1 | fimbrial biogenesis outer membrane usher protein | - |
| A8179_RS24605 () | 9352..9822 | + | 471 | WP_000266945.1 | pilin structural protein SafD | - |
| A8179_RS24610 () | 10228..11049 | + | 822 | WP_072600856.1 | polysaccharide deacetylase family protein | - |
| A8179_RS24615 () | 11354..12580 | + | 1227 | WP_015062775.1 | phosphoadenosine phosphosulfate reductase | - |
| A8179_RS24620 () | 12565..13206 | + | 642 | WP_000502861.1 | ParB/RepB/Spo0J family partition protein | - |
| A8179_RS24625 () | 13237..13491 | + | 255 | WP_024135575.1 | PerC family transcriptional regulator | - |
| A8179_RS24630 () | 13969..14916 | + | 948 | WP_000970299.1 | LysR family transcriptional regulator | - |
| A8179_RS24635 () | 16579..17451 | - | 873 | WP_065304522.1 | incFII family plasmid replication initiator RepA | - |
| A8179_RS24640 () | 17432..17509 | - | 78 | WP_031606513.1 | RepA leader peptide Tap | - |
| A8179_RS24650 () | 17767..18027 | - | 261 | WP_001278276.1 | replication regulatory protein RepA | - |
| A8179_RS24655 () | 18266..21958 | - | 3693 | WP_072600861.1 | relaxase | - |
| A8179_RS24660 () | 21948..22298 | - | 351 | WP_001293490.1 | hypothetical protein | - |
| A8179_RS24665 () | 22604..23281 | - | 678 | WP_001282465.1 | hypothetical protein | - |
| A8179_RS24670 () | 23289..23996 | - | 708 | WP_000783363.1 | hypothetical protein | - |
| A8179_RS24675 () | 23993..24421 | - | 429 | WP_000342968.1 | hypothetical protein | - |
| A8179_RS24680 () | 24740..25177 | - | 438 | WP_000466316.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| A8179_RS24685 () | 25202..25384 | - | 183 | WP_000833472.1 | type II toxin-antitoxin system HicA family toxin | - |
| A8179_RS24690 () | 25733..28018 | - | 2286 | WP_015062761.1 | type IA DNA topoisomerase | - |
| A8179_RS24695 () | 28083..28625 | - | 543 | WP_000157063.1 | single-stranded DNA-binding protein | - |
| A8179_RS24700 () | 28773..29198 | - | 426 | WP_000897366.1 | hypothetical protein | - |
| A8179_RS24705 () | 29225..29611 | - | 387 | WP_015062759.1 | exodeoxyribonuclease V subunit beta | - |
| A8179_RS24710 () | 29613..30095 | - | 483 | WP_001078616.1 | lytic transglycosylase domain-containing protein | - |
| A8179_RS24715 () | 30092..30712 | - | 621 | WP_000220345.1 | prepilin peptidase | - |
| A8179_RS24720 () | 30715..31134 | - | 420 | WP_000834558.1 | type IV pilus biogenesis protein PilM | - |
| A8179_RS24725 () | 31209..32525 | - | 1317 | WP_000996147.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| A8179_RS24730 () | 32541..33479 | - | 939 | WP_001081000.1 | Flp pilus assembly complex ATPase component TadA | - |
| A8179_RS24735 () | 33531..34043 | - | 513 | WP_000768888.1 | hypothetical protein | - |
| A8179_RS24740 () | 34100..35164 | - | 1065 | WP_001079825.1 | type II secretion system F family protein | - |
| A8179_RS24745 () | 35151..36713 | - | 1563 | WP_001293909.1 | Flp pilus assembly complex ATPase component TadA | - |
| A8179_RS24750 () | 36728..37186 | - | 459 | WP_072600864.1 | type IV pilus biogenesis protein PilP | - |
| A8179_RS24755 () | 37164..38552 | - | 1389 | WP_000457431.1 | type 4b pilus protein PilO2 | - |
| A8179_RS24760 () | 38542..40245 | - | 1704 | WP_015062753.1 | PilN family type IVB pilus formation outer membrane protein | - |
| A8179_RS24765 () | 40358..41038 | - | 681 | WP_001668756.1 | toxin co-regulated pilus biosynthesis Q family protein | - |
| A8179_RS24770 () | 41380..41691 | - | 312 | WP_015062751.1 | IncN plasmid KikA protein | - |
| A8179_RS24775 () | 41789..43408 | - | 1620 | WP_000529879.1 | type IV secretory system conjugative DNA transfer family protein | - |
| A8179_RS24780 () | 43408..43773 | - | 366 | WP_001668757.1 | hypothetical protein | - |
| A8179_RS24785 () | 43781..44848 | - | 1068 | WP_001279010.1 | P-type DNA transfer ATPase VirB11 | - |
| A8179_RS24790 () | 44853..45065 | - | 213 | WP_000772401.1 | hypothetical protein | - |
| A8179_RS24795 () | 45193..46533 | - | 1341 | WP_001070720.1 | TrbI/VirB10 family protein | - |
| A8179_RS24800 () | 46530..47345 | - | 816 | WP_000206613.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| A8179_RS24805 () | 47342..48193 | - | 852 | WP_000897122.1 | type IV secretion system protein | - |
| A8179_RS24810 () | 48349..49293 | - | 945 | WP_072600866.1 | type IV secretion system protein | - |
| A8179_RS24815 () | 49302..49700 | - | 399 | WP_000821526.1 | hypothetical protein | - |
| A8179_RS24820 () | 49782..50459 | - | 678 | WP_001086129.1 | conjugal transfer protein | - |
| A8179_RS24830 () | 50766..51842 | - | 1077 | WP_024135576.1 | Fic family protein | - |
| A8179_RS24835 () | 52008..54500 | - | 2493 | WP_001150380.1 | VirB4 family type IV secretion system protein | - |
| A8179_RS24840 () | 54457..54828 | - | 372 | WP_015062746.1 | VirB3 family type IV secretion system protein | - |
| A8179_RS24845 () | 54828..55181 | - | 354 | WP_001037906.1 | hypothetical protein | - |
| A8179_RS24850 () | 55156..55854 | - | 699 | WP_015062745.1 | lytic transglycosylase domain-containing protein | - |
| A8179_RS24855 () | 55893..56144 | - | 252 | WP_000213776.1 | hypothetical protein | - |
| A8179_RS24865 () | 56494..56949 | - | 456 | WP_001287806.1 | hypothetical protein | - |
| A8179_RS24870 () | 57006..57497 | - | 492 | WP_000872472.1 | transcription termination factor NusG | - |
| A8179_RS24875 () | 57996..58283 | + | 288 | WP_000777022.1 | hypothetical protein | - |
| A8179_RS24880 () | 58343..58771 | + | 429 | WP_000590032.1 | hypothetical protein | - |
| A8179_RS24885 () | 58821..59114 | + | 294 | WP_001123824.1 | hypothetical protein | - |
| A8179_RS24890 () | 59533..60351 | + | 819 | WP_031610040.1 | tyrosine-type recombinase/integrase | - |
| A8179_RS24895 () | 60538..61200 | + | 663 | WP_000520510.1 | peptidyl-arginine deiminase | - |
| A8179_RS24900 () | 61316..61570 | + | 255 | WP_001187274.1 | hypothetical protein | - |
| A8179_RS24905 () | 62640..62897 | - | 258 | Protein_67 | hypothetical protein | - |
| A8179_RS24910 () | 63201..64130 | + | 930 | WP_000728916.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| A8179_RS24915 () | 65115..65349 | + | 235 | Protein_69 | Rpn family recombination-promoting nuclease/putative transposase | - |
| A8179_RS24920 () | 65656..66351 | - | 696 | WP_072600869.1 | CPBP family intramembrane metalloprotease | - |
| A8179_RS24925 () | 66855..67637 | - | 783 | WP_000082174.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|