MGE detailed information
MGE type: Prophage MGE length: 54411 bp
Accession: NZ_CP015995 Location: 2383658..2438068 Organism: Escherichia coli strain S51 Replicon: chromosome
Accession: NZ_CP015995 Location: 2383658..2438068 Organism: Escherichia coli strain S51 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9K64_RS11900 () | 2380171..2380917 | + | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| A9K64_RS11905 () | 2381006..2381692 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| A9K64_RS11910 () | 2381870..2382073 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| A9K64_RS11915 () | 2382109..2383569 | - | 1461 | WP_000527751.1 | mannitol dehydrogenase family protein | - |
| A9K64_RS11920 () | 2383658..2384941 | - | 1284 | Protein_2277 | MHS family MFS transporter YdfJ | - |
| A9K64_RS29040 () | 2385545..2385658 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| A9K64_RS11925 () | 2385727..2385960 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| A9K64_RS11930 () | 2386277..2386867 | + | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| A9K64_RS11945 () | 2388131..2388340 | - | 210 | WP_077249255.1 | hypothetical protein | - |
| A9K64_RS11950 () | 2388401..2389033 | - | 633 | WP_000090891.1 | tail assembly protein | - |
| A9K64_RS11955 () | 2388970..2389713 | - | 744 | WP_023568777.1 | C40 family peptidase | - |
| A9K64_RS11960 () | 2389719..2390417 | - | 699 | WP_001152624.1 | phage minor tail protein L | - |
| A9K64_RS11965 () | 2390417..2390746 | - | 330 | WP_000847345.1 | phage tail protein | - |
| A9K64_RS11970 () | 2390743..2393322 | - | 2580 | WP_064638348.1 | phage tail tape measure protein | - |
| A9K64_RS11975 () | 2393315..2393749 | - | 435 | WP_000459480.1 | phage tail assembly protein T | - |
| A9K64_RS11980 () | 2393731..2394153 | - | 423 | WP_000479139.1 | phage minor tail protein G | - |
| A9K64_RS11985 () | 2394169..2394909 | - | 741 | WP_001439072.1 | phage tail protein | - |
| A9K64_RS11990 () | 2394917..2395312 | - | 396 | WP_000683143.1 | phage minor tail U family protein | - |
| A9K64_RS11995 () | 2395309..2395887 | - | 579 | WP_000985116.1 | phage tail protein | - |
| A9K64_RS12000 () | 2395899..2396252 | - | 354 | WP_000752994.1 | head-tail joining protein | - |
| A9K64_RS12005 () | 2396264..2396659 | - | 396 | WP_000158876.1 | DNA-packaging protein FI | - |
| A9K64_RS12010 () | 2396701..2397726 | - | 1026 | WP_000063254.1 | major capsid protein | - |
| A9K64_RS12015 () | 2397782..2398114 | - | 333 | WP_001358225.1 | head decoration protein | - |
| A9K64_RS12020 () | 2398124..2399443 | - | 1320 | WP_000123245.1 | S49 family peptidase | - |
| A9K64_RS12025 () | 2399424..2401025 | - | 1602 | WP_001324962.1 | phage portal protein | - |
| A9K64_RS12030 () | 2401022..2401228 | - | 207 | WP_000198149.1 | gpW family protein | - |
| A9K64_RS12035 () | 2401225..2403150 | - | 1926 | WP_001027297.1 | phage terminase large subunit family protein | - |
| A9K64_RS12040 () | 2403125..2403670 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| A9K64_RS12050 () | 2404059..2404292 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| A9K64_RS12055 () | 2404350..2404760 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| A9K64_RS12060 () | 2404912..2405085 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| A9K64_RS12065 () | 2405257..2405412 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| A9K64_RS29045 () | 2405492..2405557 | - | 66 | WP_122985912.1 | hypothetical protein | - |
| A9K64_RS26920 () | 2405560..2405748 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| A9K64_RS12070 () | 2405759..2405971 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| A9K64_RS12075 () | 2406334..2406831 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| A9K64_RS12080 () | 2406828..2407361 | - | 534 | WP_001092971.1 | lysozyme | - |
| A9K64_RS12085 () | 2407358..2407669 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| A9K64_RS12090 () | 2407674..2407889 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| A9K64_RS29660 () | 2408108..2408278 | + | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| A9K64_RS12095 () | 2408642..2408857 | - | 216 | WP_000066485.1 | cold shock-like protein CspB | - |
| A9K64_RS12100 () | 2409156..2409368 | + | 213 | WP_024172454.1 | cold shock-like protein CspF | - |
| A9K64_RS29050 () | 2409423..2409512 | + | 90 | WP_122985911.1 | hypothetical protein | - |
| A9K64_RS12105 () | 2409790..2410542 | - | 753 | WP_001047135.1 | antitermination protein | - |
| A9K64_RS12110 () | 2410556..2411605 | - | 1050 | WP_001439074.1 | DUF968 domain-containing protein | - |
| A9K64_RS12115 () | 2411607..2411885 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| A9K64_RS12120 () | 2411952..2412203 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| A9K64_RS12125 () | 2412420..2412575 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| A9K64_RS12130 () | 2412647..2412934 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| A9K64_RS12135 () | 2412934..2413173 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| A9K64_RS26925 () | 2413198..2413503 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| A9K64_RS12140 () | 2413706..2414038 | + | 333 | WP_001301033.1 | protein FlxA | - |
| A9K64_RS12145 () | 2414475..2415815 | - | 1341 | WP_000589013.1 | ISNCY family transposase ISCARN112 | Transposase |
| A9K64_RS12160 () | 2416584..2416870 | - | 287 | Protein_2327 | hypothetical protein | - |
| A9K64_RS29665 () | 2417036..2417218 | - | 183 | Protein_2328 | hypothetical protein | - |
| A9K64_RS12165 () | 2417481..2417837 | - | 357 | WP_001315552.1 | class I SAM-dependent methyltransferase | - |
| A9K64_RS12170 () | 2417834..2418256 | - | 423 | WP_001151260.1 | DUF977 family protein | - |
| A9K64_RS12175 () | 2418297..2419262 | - | 966 | WP_000054514.1 | hypothetical protein | - |
| A9K64_RS12180 () | 2419243..2419764 | - | 522 | WP_000705355.1 | hypothetical protein | - |
| A9K64_RS12185 () | 2419748..2419975 | - | 228 | WP_000921596.1 | transcriptional regulator | - |
| A9K64_RS12190 () | 2420057..2420464 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| A9K64_RS12195 () | 2420633..2420788 | + | 156 | WP_000379588.1 | DUF1391 family protein | - |
| A9K64_RS12200 () | 2420948..2421166 | + | 219 | WP_001171952.1 | hypothetical protein | - |
| A9K64_RS12210 () | 2421734..2421922 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| A9K64_RS12215 () | 2421919..2422110 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| A9K64_RS12220 () | 2422203..2424674 | + | 2472 | WP_000048327.1 | exonuclease | - |
| A9K64_RS12225 () | 2424747..2424998 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| A9K64_RS12230 () | 2425033..2426313 | + | 1281 | WP_064638355.1 | Putative defective protein IntQ ; Integrase | Integrase |
| A9K64_RS28360 () | 2426333..2426443 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| A9K64_RS12235 () | 2426501..2427520 | - | 1020 | WP_000836057.1 | Zn-dependent oxidoreductase | - |
| A9K64_RS12240 () | 2427532..2428746 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| A9K64_RS12245 () | 2428952..2429278 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| A9K64_RS12250 () | 2429413..2429754 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| A9K64_RS12255 () | 2429789..2430349 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| A9K64_RS12260 () | 2430352..2431062 | - | 711 | WP_077249271.1 | YnfC family lipoprotein | - |
| A9K64_RS12265 () | 2431170..2431475 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| A9K64_RS12270 () | 2431674..2434100 | + | 2427 | WP_000041535.1 | dimethyl sulfoxide reductase subunit A | - |
| A9K64_RS12275 () | 2434161..2436584 | + | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| A9K64_RS12280 () | 2436595..2437212 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| A9K64_RS12285 () | 2437214..2438068 | + | 855 | WP_000526492.1 | dimethyl sulfoxide reductase anchor subunit | - |
| A9K64_RS12290 () | 2438111..2438725 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| A9K64_RS12295 () | 2438884..2440176 | + | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| A9K64_RS12300 () | 2440129..2440824 | - | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| A9K64_RS12305 () | 2440949..2442169 | - | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|