MGE detailed information
MGE type: Prophage MGE length: 96447 bp
Accession: NZ_CP015992 Location: 3440739..3537185 Organism: Pseudomonas sp. TCU-HL1 Replicon: chromosome
Accession: NZ_CP015992 Location: 3440739..3537185 Organism: Pseudomonas sp. TCU-HL1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| THL1_RS15945 () | 3436256..3436534 | + | 279 | WP_028627186.1 | peptidylprolyl isomerase | - |
| THL1_RS15950 () | 3436612..3436911 | - | 300 | WP_069084146.1 | hypothetical protein | - |
| THL1_RS15955 () | 3436999..3437187 | - | 189 | WP_069084147.1 | hypothetical protein | - |
| THL1_RS15960 () | 3437451..3439040 | + | 1590 | WP_069084148.1 | ABC-F family ATPase | - |
| THL1_RS15965 () | 3439236..3439844 | - | 609 | WP_069084149.1 | FMN-dependent NADH-azoreductase | - |
| THL1_RS15970 () | 3440080..3440586 | - | 507 | WP_069084150.1 | DUF1993 domain-containing protein | - |
| THL1_RS15975 () | 3440739..3441647 | + | 909 | WP_069084151.1 | hypothetical protein | VF |
| THL1_RS15980 () | 3441739..3442920 | + | 1182 | WP_069086537.1 | MFS transporter | - |
| THL1_RS15985 () | 3442935..3443282 | + | 348 | WP_069084152.1 | MmcQ/YjbR family DNA-binding protein | - |
| THL1_RS15990 () | 3443307..3443618 | + | 312 | WP_069084153.1 | DUF2834 domain-containing protein | - |
| THL1_RS15995 () | 3443623..3444180 | + | 558 | WP_069084154.1 | putative glycolipid-binding domain-containing protein | - |
| THL1_RS16000 () | 3444317..3447376 | - | 3060 | WP_069084155.1 | hypothetical protein | VF |
| THL1_RS16005 () | 3447373..3448389 | - | 1017 | WP_069084156.1 | efflux RND transporter periplasmic adaptor subunit | - |
| THL1_RS16010 () | 3448497..3449276 | - | 780 | WP_069084157.1 | ABC transporter permease | - |
| THL1_RS16015 () | 3449273..3450205 | - | 933 | WP_069084158.1 | ABC transporter ATP-binding protein | - |
| THL1_RS16020 () | 3450522..3452486 | - | 1965 | WP_069084159.1 | hypothetical protein | VF |
| THL1_RS16025 () | 3452749..3455436 | + | 2688 | WP_069084160.1 | cation-transporting P-type ATPase | - |
| THL1_RS16030 () | 3455662..3456801 | - | 1140 | WP_069081451.1 | IS481 family transposase ISEc19 | Transposase |
| THL1_RS16035 () | 3457102..3457710 | - | 609 | WP_069084161.1 | flavin reductase family protein | - |
| THL1_RS16040 () | 3457782..3458291 | - | 510 | WP_069084162.1 | tetratricopeptide repeat protein | - |
| THL1_RS16045 () | 3459754..3459939 | + | 186 | WP_069084163.1 | hypothetical protein | - |
| THL1_RS16050 () | 3459936..3460733 | + | 798 | WP_069084164.1 | hypothetical protein | - |
| THL1_RS16055 () | 3460816..3462342 | - | 1527 | WP_069081355.1 | IS66 family transposase ISSal1 | Transposase |
| THL1_RS30400 () | 3462596..3462700 | - | 105 | Protein_3203 | IS66 family transposase ISSal1 | Transposase |
| THL1_RS16065 () | 3462736..3463053 | - | 318 | WP_069081357.1 | IS66 family transposase ISPpu14 | Transposase |
| THL1_RS28990 () | 3463207..3463491 | - | 285 | WP_083245902.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| THL1_RS16075 () | 3463502..3463735 | - | 234 | WP_028628036.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| THL1_RS16080 () | 3464006..3464977 | - | 972 | WP_069084166.1 | phage portal protein | - |
| THL1_RS16085 () | 3464977..3466737 | - | 1761 | WP_069084167.1 | terminase ATPase subunit family protein | - |
| THL1_RS16090 () | 3466882..3467721 | + | 840 | WP_069084168.1 | GPO family capsid scaffolding protein | - |
| THL1_RS16095 () | 3467748..3468758 | + | 1011 | WP_069084169.1 | phage major capsid protein, P2 family | - |
| THL1_RS16100 () | 3468761..3469459 | + | 699 | WP_069084170.1 | terminase endonuclease subunit | - |
| THL1_RS16105 () | 3469563..3470024 | + | 462 | WP_069084171.1 | head completion/stabilization protein | - |
| THL1_RS16110 () | 3470024..3470230 | + | 207 | WP_069084172.1 | tail protein X | - |
| THL1_RS16115 () | 3470245..3470559 | + | 315 | WP_069084173.1 | phage holin, lambda family | - |
| THL1_RS16120 () | 3470556..3471383 | + | 828 | WP_069084174.1 | N-acetylmuramidase family protein | - |
| THL1_RS16125 () | 3471380..3471586 | + | 207 | WP_069084175.1 | hypothetical protein | - |
| THL1_RS16130 () | 3471583..3472113 | + | 531 | WP_069084176.1 | phage tail protein | - |
| THL1_RS16135 () | 3472103..3472558 | + | 456 | WP_069084177.1 | phage virion morphogenesis protein | - |
| THL1_RS16140 () | 3472886..3473203 | + | 318 | WP_069084178.1 | hypothetical protein | - |
| THL1_RS28995 () | 3473376..3475400 | - | 2025 | WP_083245903.1 | S8 family serine peptidase | - |
| THL1_RS29000 () | 3475388..3476368 | - | 981 | WP_145928311.1 | trypsin-like serine protease | - |
| THL1_RS16145 () | 3476530..3477264 | + | 735 | WP_069084179.1 | hypothetical protein | - |
| THL1_RS16150 () | 3477341..3477907 | + | 567 | WP_069084180.1 | phage baseplate assembly protein V | - |
| THL1_RS16155 () | 3477904..3478248 | + | 345 | WP_069084181.1 | GPW/gp25 family protein | - |
| THL1_RS16160 () | 3478245..3479249 | + | 1005 | WP_069084182.1 | baseplate J/gp47 family protein | - |
| THL1_RS16165 () | 3479242..3480078 | + | 837 | WP_069084183.1 | phage tail protein I | - |
| THL1_RS16170 () | 3480075..3482261 | + | 2187 | WP_069084184.1 | phage tail protein | - |
| THL1_RS16175 () | 3482266..3483087 | + | 822 | WP_069084185.1 | hypothetical protein | - |
| THL1_RS16180 () | 3483098..3483565 | + | 468 | WP_069084186.1 | hypothetical protein | - |
| THL1_RS16185 () | 3483654..3484823 | + | 1170 | WP_069084187.1 | phage tail sheath protein | - |
| THL1_RS16190 () | 3484917..3485432 | + | 516 | WP_069084188.1 | phage major tail tube protein | - |
| THL1_RS16195 () | 3485497..3485736 | + | 240 | WP_069084189.1 | hypothetical protein | - |
| THL1_RS16200 () | 3485726..3486010 | + | 285 | WP_069084190.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| THL1_RS16205 () | 3486102..3486410 | + | 309 | WP_069084191.1 | phage tail assembly protein | - |
| THL1_RS29005 () | 3486419..3486538 | + | 120 | WP_083245906.1 | GpE family phage tail protein | - |
| THL1_RS16210 () | 3486528..3489071 | + | 2544 | WP_069084192.1 | phage tail tape measure protein | - |
| THL1_RS16215 () | 3489077..3489508 | + | 432 | WP_069084193.1 | phage tail protein | - |
| THL1_RS16220 () | 3489505..3490512 | + | 1008 | WP_069084194.1 | phage late control D family protein | - |
| THL1_RS16225 () | 3490806..3491048 | + | 243 | WP_069084195.1 | hypothetical protein | - |
| THL1_RS16230 () | 3491250..3491408 | + | 159 | WP_145928312.1 | type II toxin-antitoxin system MqsR family toxin | - |
| THL1_RS16235 () | 3491490..3491843 | + | 354 | WP_096368068.1 | IS66 family transposase ISPsy34 | Transposase |
| THL1_RS16240 () | 3491863..3493362 | + | 1500 | WP_083245827.1 | IS66 family transposase ISPpu13 | Transposase |
| THL1_RS16245 () | 3493432..3493557 | + | 126 | WP_083245907.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| THL1_RS16250 () | 3493560..3493964 | + | 405 | WP_069084196.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| THL1_RS16255 () | 3494141..3495049 | - | 909 | WP_069084197.1 | DUF2806 domain-containing protein | - |
| THL1_RS16260 () | 3495097..3495585 | - | 489 | WP_083245908.1 | GIY-YIG nuclease family protein | - |
| THL1_RS29725 () | 3495637..3496203 | - | 567 | WP_145928313.1 | hypothetical protein | - |
| THL1_RS16270 () | 3496200..3497129 | - | 930 | WP_069084200.1 | hypothetical protein | - |
| THL1_RS16275 () | 3497172..3497573 | - | 402 | WP_069084201.1 | hypothetical protein | - |
| THL1_RS16280 () | 3497641..3498006 | - | 366 | WP_069084202.1 | helix-turn-helix domain-containing protein | - |
| THL1_RS16285 () | 3498091..3498330 | + | 240 | WP_069084203.1 | DNA-binding protein | - |
| THL1_RS16290 () | 3498343..3498531 | + | 189 | WP_069084204.1 | hypothetical protein | - |
| THL1_RS16295 () | 3498560..3498742 | + | 183 | WP_069084205.1 | hypothetical protein | - |
| THL1_RS16300 () | 3498794..3499063 | + | 270 | WP_069084206.1 | hypothetical protein | - |
| THL1_RS16305 () | 3499068..3499355 | + | 288 | WP_069084207.1 | ogr/Delta-like zinc finger family protein | - |
| THL1_RS16310 () | 3499358..3499720 | + | 363 | WP_069084208.1 | hypothetical protein | - |
| THL1_RS16315 () | 3499784..3500026 | + | 243 | WP_069084209.1 | hypothetical protein | - |
| THL1_RS16320 () | 3500023..3502821 | + | 2799 | WP_069084210.1 | toprim domain-containing protein | - |
| THL1_RS16325 () | 3502841..3503113 | + | 273 | WP_069084211.1 | pyocin activator PrtN family protein | - |
| THL1_RS16330 () | 3503106..3503732 | - | 627 | WP_069084212.1 | hypothetical protein | - |
| THL1_RS16335 () | 3503774..3504895 | - | 1122 | WP_069084213.1 | hypothetical protein ; Integrase | Integrase |
| THL1_RS16340 () | 3505003..3506013 | + | 1011 | WP_083245909.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| THL1_RS16345 () | 3505983..3506369 | - | 387 | WP_145928314.1 | hypothetical protein | - |
| THL1_RS16350 () | 3506656..3507582 | + | 927 | WP_069084215.1 | transaldolase | - |
| THL1_RS16355 () | 3507647..3508129 | - | 483 | WP_069084216.1 | STAS domain-containing protein | - |
| THL1_RS16360 () | 3508126..3509310 | - | 1185 | WP_069084217.1 | hypothetical protein | VF |
| THL1_RS16365 () | 3509526..3509825 | + | 300 | WP_069084218.1 | PilZ domain-containing protein | - |
| THL1_RS16370 () | 3509899..3510600 | - | 702 | WP_069084219.1 | VacJ family lipoprotein | - |
| THL1_RS16375 () | 3510704..3511123 | + | 420 | WP_069084220.1 | acyl-CoA thioesterase | - |
| THL1_RS16380 () | 3511179..3511919 | + | 741 | WP_069084221.1 | phosphatase | - |
| THL1_RS16385 () | 3512053..3512316 | + | 264 | WP_069084222.1 | DUF4404 family protein | - |
| THL1_RS16390 () | 3512360..3513193 | - | 834 | WP_069084223.1 | NADPH-dependent 7-cyano-7-deazaguanine reductase QueF | - |
| THL1_RS16395 () | 3513689..3515185 | + | 1497 | WP_069084224.1 | DUF3375 domain-containing protein | - |
| THL1_RS16400 () | 3515187..3515954 | + | 768 | WP_069084225.1 | DUF4194 domain-containing protein | - |
| THL1_RS16405 () | 3515941..3519252 | + | 3312 | WP_069084226.1 | hypothetical protein | - |
| THL1_RS16410 () | 3519249..3520400 | + | 1152 | WP_069084227.1 | hypothetical protein | - |
| THL1_RS16415 () | 3520932..3521876 | + | 945 | WP_069084228.1 | dihydrodipicolinate synthase family protein | - |
| THL1_RS16420 () | 3522338..3523081 | - | 744 | WP_069084229.1 | sulfite exporter TauE/SafE family protein | - |
| THL1_RS16425 () | 3523514..3524287 | - | 774 | WP_069084230.1 | hypothetical protein | VF |
| THL1_RS16430 () | 3524481..3525365 | + | 885 | WP_069084231.1 | EamA family transporter | - |
| THL1_RS16435 () | 3525554..3527215 | + | 1662 | WP_202969606.1 | SEC-C domain-containing protein | - |
| THL1_RS16440 () | 3527452..3529176 | + | 1725 | WP_069084233.1 | ATP-binding protein | - |
| THL1_RS29730 () | 3529170..3530012 | + | 843 | WP_145928315.1 | hypothetical protein | - |
| THL1_RS16450 () | 3530495..3531493 | - | 999 | WP_069084234.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| THL1_RS16455 () | 3531674..3532645 | + | 972 | WP_069084235.1 | Tn3 family transposase TnpR_TnXo19 | Transposase |
| THL1_RS16460 () | 3532712..3533638 | + | 927 | WP_202969643.1 | restriction endonuclease | - |
| THL1_RS29015 () | 3533673..3534068 | + | 396 | WP_083245914.1 | hypothetical protein | - |
| THL1_RS16470 () | 3534413..3536113 | - | 1701 | WP_069084238.1 | ABC transporter permease subunit | - |
| THL1_RS16475 () | 3536106..3537185 | - | 1080 | WP_069084239.1 | hypothetical protein | VF |
| THL1_RS16480 () | 3537207..3538313 | - | 1107 | WP_069084240.1 | extracellular solute-binding protein | - |
| THL1_RS16485 () | 3538855..3539961 | - | 1107 | WP_069084241.1 | mandelate racemase/muconate lactonizing enzyme family protein | - |
| THL1_RS16490 () | 3540331..3541002 | - | 672 | WP_069084242.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|