NZ_CP0159891..192095

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 192095 bp
Accession: NZ_CP015989        Location: 1..192095         Organism: Sphingobium sp. EP60837       Replicon: plasmid pEP2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EP837_RS19330 () 351..1077 - 727 Protein_0 phospholipase A -
EP837_RS19335 () 968..1834 - 867 WP_006961816.1 Tn3 family transposase TnpR_ISThsp9 Transposase
EP837_RS19340 () 1977..4886 - 2910 WP_006961814.1 Tn3 family transposase TnpA_ISYps3 Transposase
EP837_RS19345 () 4926..5204 + 279 WP_156518801.1 hypothetical protein -
EP837_RS19350 () 5259..5825 + 567 WP_066532444.1 TetR/AcrR family transcriptional regulator -
EP837_RS19355 () 5822..6316 + 495 WP_066532446.1 hypothetical protein -
EP837_RS19360 () 6342..6713 - 372 Protein_6 DUF779 domain-containing protein -
EP837_RS19365 () 6810..8330 - 1521 WP_066532447.1 aldehyde dehydrogenase family protein -
EP837_RS20790 () 8680..8991 - 312 WP_082919880.1 YdhR family protein -
EP837_RS19370 () 9062..10582 - 1521 WP_156518811.1 GMC family oxidoreductase -
EP837_RS19375 () 10670..11434 - 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
EP837_RS19380 () 11497..13350 - 1854 Protein_11 carbaryl hydrolase CehA -
EP837_RS19385 () 13439..14719 - 1281 WP_156518813.1 metallophosphoesterase -
EP837_RS19390 () 14912..15691 - 780 WP_006955904.1 IS21 family transposase ISRsp3 Transposase
EP837_RS19395 () 15681..17201 - 1521 WP_032490240.1 IS21 family transposase ISRsp3 Transposase
EP837_RS20795 () 17454..17765 - 312 WP_082919880.1 YdhR family protein -
EP837_RS19400 () 17836..18264 - 429 WP_197486443.1 hypothetical protein -
EP837_RS19405 () 18435..19214 - 780 WP_006955904.1 IS21 family transposase ISRsp3 Transposase
EP837_RS19410 () 19204..20724 - 1521 WP_032490240.1 IS21 family transposase ISRsp3 Transposase
EP837_RS19415 () 20865..21116 - 252 WP_066532463.1 helix-turn-helix domain-containing protein -
EP837_RS19420 () 21224..21538 - 315 WP_066532670.1 single-stranded DNA-binding protein -
EP837_RS19425 () 21932..22615 - 684 WP_066532672.1 Tn3 family transposase TnpR_TnEc1 Transposase
EP837_RS20800 () 22742..22999 + 258 WP_081215339.1 helix-turn-helix domain-containing protein -
EP837_RS19430 () 23113..23292 + 180 WP_004213289.1 hypothetical protein -
EP837_RS19435 () 23310..23519 - 210 WP_007016085.1 hypothetical protein -
EP837_RS19440 () 23612..23833 - 222 WP_004213291.1 hypothetical protein -
EP837_RS19445 () 24131..24448 - 318 WP_006953908.1 hypothetical protein -
EP837_RS19450 () 24670..24927 - 258 WP_006953903.1 hypothetical protein -
EP837_RS19455 () 25184..25666 - 483 WP_006953901.1 hypothetical protein -
EP837_RS19460 () 25816..26625 - 810 WP_006953899.1 hypothetical protein -
EP837_RS19465 () 26622..26870 - 249 WP_006953897.1 hypothetical protein -
EP837_RS19475 () 27367..27627 - 261 WP_006953895.1 hypothetical protein -
EP837_RS21465 () 27745..27891 - 147 WP_006953893.1 hypothetical protein -
EP837_RS19480 () 28027..28263 - 237 WP_006953891.1 hypothetical protein -
EP837_RS19485 () 28729..29019 + 291 WP_006953889.1 hypothetical protein -
EP837_RS19490 () 29061..29594 - 534 WP_007016089.1 hypothetical protein -
EP837_RS19495 () 29591..29800 - 210 WP_004213310.1 hypothetical protein -
EP837_RS19500 () 29813..30079 - 267 WP_004213311.1 hypothetical protein -
EP837_RS19505 () 30076..30363 - 288 WP_006953883.1 hypothetical protein -
EP837_RS19510 () 30375..30764 - 390 WP_013054018.1 DUF3768 domain-containing protein -
EP837_RS19515 () 31092..32372 - 1281 WP_006968049.1 Fic family protein -
EP837_RS19520 () 32376..32636 - 261 WP_006968047.1 hypothetical protein -
EP837_RS19525 () 32784..33656 - 873 WP_004213405.1 DUF1738 domain-containing protein -
EP837_RS19530 () 34140..35915 - 1776 WP_021319980.1 ParB/RepB/Spo0J family partition protein -
EP837_RS19535 () 36394..39363 - 2970 WP_066532466.1 Tn3 family transposase TnpA_ISAli20 Transposase
EP837_RS19540 () 39504..40073 + 570 WP_011607925.1 Tn3 family transposase TnpR_ISMex38 Transposase
EP837_RS19545 () 40149..40367 + 219 WP_066532468.1 hypothetical protein -
EP837_RS19550 () 40454..40834 - 381 WP_082919881.1 metalloregulator ArsR/SmtB family transcription factor -
EP837_RS19555 () 40831..41502 - 672 WP_156518805.1 redoxin domain-containing protein -
EP837_RS19560 () 41607..42515 + 909 WP_066532674.1 MBL fold metallo-hydrolase -
EP837_RS19565 () 42515..42946 + 432 WP_066532677.1 YeeE/YedE family protein -
EP837_RS19570 () 42943..43383 + 441 WP_066532472.1 hypothetical protein -
EP837_RS19575 () 43405..45090 + 1686 WP_066532474.1 TIGR01244 family phosphatase -
EP837_RS19580 () 45096..45872 + 777 WP_066532679.1 sulfite exporter TauE/SafE family protein -
EP837_RS19585 () 46030..47433 + 1404 WP_066532476.1 cytochrome ubiquinol oxidase subunit I -
EP837_RS19590 () 47439..48446 + 1008 WP_066532479.1 cytochrome d ubiquinol oxidase subunit II -
EP837_RS20820 () 48446..48559 + 114 WP_082919883.1 DUF2474 domain-containing protein -
EP837_RS19600 () 48821..49825 - 1005 WP_066532482.1 IS30 family transposase ISRle2 Transposase
EP837_RS19605 () 50076..51494 - 1419 WP_066532485.1 ISNCY family transposase ISMex6 Transposase
EP837_RS19610 () 51639..52205 - 567 WP_066532488.1 hypothetical protein -
EP837_RS19615 () 52470..53228 + 759 WP_066532489.1 autoinducer binding domain-containing protein -
EP837_RS19620 () 53247..53993 + 747 WP_066532491.1 Transcriptional activator protein LuxR VF
EP837_RS19625 () 54071..54688 + 618 WP_066532685.1 4-coumaroyl-homoserine lactone synthase VF
EP837_RS19630 () 54706..55614 + 909 WP_066532687.1 phytanoyl-CoA dioxygenase family protein -
EP837_RS19635 () 55745..56107 + 363 WP_066532494.1 hypothetical protein -
EP837_RS19640 () 56104..56778 + 675 WP_066532496.1 Type IV secretion system protein virB1 VF
EP837_RS19645 () 56775..57116 + 342 WP_066532498.1 TrbC/VirB2 family protein -
EP837_RS19650 () 57127..57462 + 336 WP_056769051.1 Type IV secretion system protein virB3 VF
EP837_RS19655 () 57455..59872 + 2418 WP_066532501.1 Type IV secretion system protein virB4 VF
EP837_RS19660 () 59877..60587 + 711 WP_066532504.1 type IV secretion system protein -
EP837_RS20825 () 60584..60811 + 228 WP_082919884.1 EexN family lipoprotein -
EP837_RS19670 () 60830..61774 + 945 WP_066532508.1 type IV secretion system protein -
EP837_RS19675 () 62097..62786 + 690 WP_066532690.1 Type IV secretion system protein virB8 VF
EP837_RS19680 () 62783..63640 + 858 WP_066532513.1 Type IV secretion system protein virB9 VF
EP837_RS19685 () 63646..64863 + 1218 WP_066532692.1 Type IV secretion system protein virB10 VF
EP837_RS19690 () 64866..65870 + 1005 WP_066532515.1 Type IV secretion system protein VirB11 VF
EP837_RS19695 () 65836..67848 + 2013 WP_156518807.1 Protein VirD4 VF
EP837_RS19700 () 68036..68794 + 759 WP_082919890.1 DNA transfer protein -
EP837_RS19705 () 69049..69879 + 831 WP_066532521.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
EP837_RS19710 () 69879..70712 + 834 WP_066532525.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
EP837_RS19715 () 71203..73458 - 2256 WP_066532527.1 AAA family ATPase -
EP837_RS19720 () 73898..75175 + 1278 WP_066532530.1 DNA repair exonuclease -
EP837_RS19725 () 75162..78647 + 3486 WP_066532534.1 YhaN family protein -
EP837_RS19730 () 78682..80607 - 1926 WP_066532539.1 hypothetical protein -
EP837_RS19735 () 80617..81264 - 648 WP_066532542.1 hypothetical protein -
EP837_RS19740 () 81278..83002 - 1725 WP_066532546.1 ATP-dependent helicase -
EP837_RS19745 () 82999..85002 - 2004 WP_066532549.1 AAA family ATPase -
EP837_RS19750 () 85158..85596 + 439 Protein_87 hypothetical protein -
EP837_RS19755 () 85621..86607 + 987 WP_066532550.1 hypothetical protein -
EP837_RS19760 () 86604..87101 + 498 WP_066532553.1 hypothetical protein -
EP837_RS19765 () 87597..88727 - 1131 WP_066532557.1 T-DNA border endonuclease VirD2 Relaxase
EP837_RS19770 () 88720..89256 - 537 WP_066532559.1 hypothetical protein Relaxase
EP837_RS19775 () 89558..90493 - 936 WP_066532561.1 ParB/RepB/Spo0J family partition protein -
EP837_RS19780 () 90493..91257 - 765 WP_066532699.1 ParA family protein -
EP837_RS19785 () 91271..91450 - 180 WP_066532566.1 hypothetical protein -
EP837_RS19790 () 91777..92172 - 396 WP_066532700.1 DUF3768 domain-containing protein -
EP837_RS19795 () 92448..92825 + 378 WP_066532703.1 hypothetical protein -
EP837_RS19800 () 92967..93488 - 522 WP_066532573.1 hypothetical protein -
EP837_RS21470 () 93600..93764 - 165 WP_170271947.1 hypothetical protein -
EP837_RS19805 () 94055..94489 + 435 WP_066532706.1 DUF2384 domain-containing protein -
EP837_RS19810 () 94486..94965 + 480 WP_066532575.1 RES domain-containing protein -
EP837_RS19820 () 95360..95788 + 429 WP_066532579.1 hypothetical protein -
EP837_RS19825 () 95918..96331 - 414 WP_066532583.1 single-stranded DNA-binding protein -
EP837_RS19830 () 96815..97438 - 624 WP_082919891.1 hypothetical protein -
EP837_RS19835 () 97672..98619 - 948 WP_066532591.1 DUF2493 domain-containing protein -
EP837_RS19840 () 98863..99309 - 447 WP_066532594.1 hypothetical protein -
EP837_RS19845 () 99337..100260 - 924 WP_066532598.1 hypothetical protein -
EP837_RS19850 () 100253..100561 - 309 WP_156518809.1 hypothetical protein -
EP837_RS19855 () 100685..102562 - 1878 WP_066532603.1 RNA-dependent DNA polymerase -
EP837_RS19860 () 103149..103415 - 267 WP_066532608.1 hypothetical protein -
EP837_RS19865 () 103441..104074 - 634 Protein_110 hypothetical protein -
EP837_RS19870 () 104206..104484 - 279 WP_066532610.1 antirestriction protein ArdC -
EP837_RS19875 () 104880..105647 + 768 WP_066532611.1 DUF2243 domain-containing protein -
EP837_RS19880 () 105659..106096 + 438 WP_066532708.1 DUF2892 domain-containing protein -
EP837_RS19885 () 106100..106972 - 873 WP_066532614.1 DUF1738 domain-containing protein -
EP837_RS21475 () 107227..107376 + 150 WP_197486442.1 hypothetical protein -
EP837_RS19895 () 107700..108313 - 614 Protein_116 DUF1738 domain-containing protein -
EP837_RS19900 () 108453..110507 - 2055 WP_066532619.1 ParB/RepB/Spo0J family partition protein -
EP837_RS19905 () 110631..114848 - 4218 WP_066532622.1 strawberry notch family protein -
EP837_RS19910 () 114918..115817 - 900 WP_066532624.1 toprim domain-containing protein -
EP837_RS19915 () 115902..116222 - 321 WP_066532626.1 single-stranded DNA-binding protein -
EP837_RS19920 () 116976..118070 + 1095 WP_066532710.1 replication initiation protein -
EP837_RS19925 () 118262..119464 + 1203 WP_066532631.1 Cell division protein PomZ VF
EP837_RS19930 () 119511..120527 + 1017 WP_066532633.1 ParB/RepB/Spo0J family partition protein -
EP837_RS19935 () 120588..121610 - 1023 WP_082919885.1 hypothetical protein -
EP837_RS19940 () 121759..122997 + 1239 WP_066532636.1 integrase -
EP837_RS19945 () 123317..124258 + 942 WP_066532640.1 IS110 family transposase ISHne5 Transposase
EP837_RS19950 () 124468..125397 + 930 WP_066532643.1 MCE family protein -
EP837_RS19955 () 125442..126092 + 651 WP_066532645.1 membrane integrity-associated transporter subunit PqiC -
EP837_RS19960 () 126508..127071 + 564 WP_139114818.1 DUF4142 domain-containing protein -
EP837_RS19965 () 127218..127694 + 477 WP_082919886.1 hypothetical protein -
EP837_RS19975 () 128271..129419 + 1149 WP_066532650.1 Multidrug export protein EmrA VF
EP837_RS19980 () 129473..130363 + 891 Protein_132 putative multidrug resistance protein EmrY VF
EP837_RS19985 () 130416..131180 - 765 WP_006949122.1 IS6 family transposase IS6100 Transposase
EP837_RS19990 () 131247..131588 + 342 Protein_134 Tn3 family transposase ISPsy42 Transposase
EP837_RS19995 () 131622..131837 + 216 Protein_135 hypothetical protein VF
EP837_RS20000 () 131916..132347 + 432 WP_017501681.1 hypothetical protein -
EP837_RS20005 () 133332..134435 + 1104 WP_004213366.1 replication initiator protein A -
EP837_RS20010 () 134480..134764 - 285 WP_017501683.1 hypothetical protein -
EP837_RS20015 () 134764..135399 - 636 WP_017501684.1 Chromosome-partitioning ATPase Soj VF
EP837_RS20020 () 135521..136152 - 632 Protein_140 transcription elongation protein SprT -
EP837_RS20025 () 136568..136849 + 282 WP_017501687.1 type II toxin-antitoxin system RelB/DinJ family antitoxin -
EP837_RS20030 () 136818..137138 + 321 WP_026109291.1 type II toxin-antitoxin system YafQ family toxin -
EP837_RS20035 () 137141..137761 + 621 WP_017501689.1 phosphoglycerate mutase family protein -
EP837_RS20040 () 137795..138340 - 546 WP_038292857.1 Tn3 family transposase TnpR_ISAzs17 Transposase
EP837_RS20045 () 139048..139773 - 726 WP_171010093.1 phospholipase A -
EP837_RS20050 () 139664..140530 - 867 WP_006961816.1 Tn3 family transposase TnpR_ISThsp9 Transposase
EP837_RS20055 () 140673..142703 - 2031 Protein_147 Tn3 family transposase TnpA_ISNpu13 Transposase
EP837_RS20060 () 142757..143521 - 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
EP837_RS20065 () 143820..145541 - 1722 WP_066532720.1 hypothetical protein -
EP837_RS20850 () 145572..145835 - 264 Protein_150 hypothetical protein -
EP837_RS20070 () 146198..148333 - 2136 WP_066532655.1 Pesticin receptor VF
EP837_RS20075 () 148534..149298 + 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
EP837_RS20080 () 149734..150285 - 552 WP_066532656.1 hypothetical protein Relaxase
EP837_RS20085 () 150476..151498 - 1023 WP_066532658.1 ParB/RepB/Spo0J family partition protein -
EP837_RS20090 () 151594..152361 - 768 WP_007686288.1 IS21 family transposase ISSsp5 Transposase
EP837_RS20095 () 152358..153851 - 1494 WP_011950768.1 IS21 family transposase ISSsp5 Transposase
EP837_RS20100 () 153954..154400 + 447 WP_156518815.1 hypothetical protein -
EP837_RS20105 () 154460..154690 + 231 WP_004213230.1 hypothetical protein -
EP837_RS20110 () 154826..155590 - 765 WP_006949122.1 IS6 family transposase IS6100 Transposase
EP837_RS20860 () 155656..155970 + 315 Protein_160 muramidase -
EP837_RS20115 () 155991..156290 - 300 WP_013041567.1 hypothetical protein -
EP837_RS20120 () 156283..156525 - 243 WP_013041566.1 hypothetical protein -
EP837_RS20125 () 156525..156851 - 327 WP_006964370.1 helix-turn-helix domain-containing protein Antitoxin Detail
EP837_RS20130 () 156848..157222 - 375 WP_013041565.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
EP837_RS21480 () 157995..158075 - 81 Protein_165 Tn3 family transposase -
EP837_RS21220 () 158062..158208 - 147 Protein_166 oxidoreductase -
EP837_RS20135 () 158296..159060 - 765 WP_006949122.1 IS6 family transposase IS6100 Transposase
EP837_RS20140 () 159127..159468 + 342 Protein_168 putative multidrug resistance protein EmrK VF
EP837_RS20145 () 159470..160993 + 1524 WP_066532663.1 Multidrug export protein EmrB VF
EP837_RS20150 () 161003..161662 + 660 WP_020817748.1 TetR/AcrR family transcriptional regulator -
EP837_RS20155 () 161735..162436 - 702 WP_020817747.1 hypothetical protein -
EP837_RS20160 () 162450..165503 - 3054 WP_066532666.1 Mobilization protein A Relaxase
EP837_RS20165 () 165677..165982 + 306 WP_020817745.1 conjugal transfer protein TraD -
EP837_RS20170 () 166020..166247 + 228 WP_020817744.1 conjugal transfer protein TraD -
EP837_RS20175 () 166244..167162 + 919 Protein_175 HEPN domain-containing protein -
EP837_RS20180 () 167164..168831 + 1668 WP_020817742.1 Conjugal transfer protein TraG VF
EP837_RS20185 () 169752..170664 + 913 Protein_177 replication initiation protein -
EP837_RS20875 () 170769..171053 - 285 Protein_178 Tn3 family transposase TnpA_ISRsp12 Transposase
EP837_RS20190 () 171117..171635 - 519 Protein_179 Hin recombinase -
EP837_RS20195 () 171697..172146 + 450 Protein_180 IS6 family transposase IS6100 Transposase
EP837_RS20200 () 172179..172772 - 594 WP_013039114.1 Tn3 family transposase ISPsy42 Transposase
EP837_RS20205 () 172912..175869 + 2958 WP_008829513.1 Tn3 family transposase TnpA_ISAzs17 Transposase
EP837_RS20210 () 175927..176247 + 321 Protein_183 IS6 family transposase IS6100 Transposase
EP837_RS20215 () 176302..176643 + 342 Protein_184 Tn3 family transposase TnpR_ISMex22 Transposase
EP837_RS20220 () 176640..177170 + 531 WP_007686150.1 GNAT family N-acetyltransferase -
EP837_RS20225 () 177235..177501 - 267 WP_020817760.1 hypothetical protein -
EP837_RS20230 () 177527..178162 - 636 WP_015063478.1 Chromosome-partitioning ATPase Soj VF
EP837_RS20235 () 178243..178878 - 636 WP_020817759.1 transcription elongation protein SprT -
EP837_RS20240 () 179381..179800 + 420 WP_020817758.1 putative toxin-antitoxin system toxin component, PIN family -
EP837_RS20245 () 179803..180081 + 279 WP_020817757.1 toxin-antitoxin system HicB family antitoxin -
EP837_RS20250 () 180088..180708 + 621 WP_015063474.1 histidine phosphatase family protein -
EP837_RS21485 () 180705..180797 - 93 WP_197423569.1 integrase/recombinase -
EP837_RS20260 () 181107..181871 - 765 WP_006949122.1 IS6 family transposase IS6100 Transposase
EP837_RS21225 () 181938..182030 + 93 Protein_194 pyruvate, phosphate dikinase -
EP837_RS20265 () 182132..183733 + 1602 WP_066532668.1 long-chain fatty acid--CoA ligase -
EP837_RS20270 () 183814..184578 - 765 WP_006949122.1 IS6 family transposase IS6100 Transposase
EP837_RS20275 () 184645..184986 + 342 Protein_197 Tn3 family transposase ISPsy42 Transposase
EP837_RS20280 () 185020..185235 + 216 Protein_198 hypothetical protein VF
EP837_RS20285 () 185314..185745 + 432 Protein_199 hypothetical protein -
EP837_RS20290 () 186730..187833 + 1104 WP_004213366.1 replication initiator protein A -
EP837_RS20295 () 187878..188162 - 285 WP_017501683.1 hypothetical protein -
EP837_RS20300 () 188162..188797 - 636 WP_017501684.1 Chromosome-partitioning ATPase Soj VF
EP837_RS20305 () 188919..189550 - 632 Protein_203 transcription elongation protein SprT -
EP837_RS20310 () 189966..190247 + 282 WP_017501687.1 type II toxin-antitoxin system RelB/DinJ family antitoxin -
EP837_RS20315 () 190216..190536 + 321 WP_026109291.1 type II toxin-antitoxin system YafQ family toxin -
EP837_RS20320 () 190539..191159 + 621 WP_017501689.1 phosphoglycerate mutase family protein -
EP837_RS20325 () 191193..191738 - 546 WP_038292857.1 Tn3 family transposase TnpR_ISAzs17 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance