MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP015912 Location: 3314959..3324310 Organism: Escherichia coli strain 210205630 Replicon: chromosome
Accession: NZ_CP015912 Location: 3314959..3324310 Organism: Escherichia coli strain 210205630 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9C00_RS16445 () | 3311690..3312409 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| A9C00_RS16450 () | 3312406..3314037 | - | 1632 | WP_001216486.1 | sensor histidine kinase | - |
| A9C00_RS16455 () | 3314218..3314448 | + | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| A9C00_RS16460 () | 3314460..3314732 | + | 273 | WP_000405649.1 | N-acetyltransferase | - |
| A9C00_RS16470 () | 3314959..3315255 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| A9C00_RS16475 () | 3315283..3315456 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| A9C00_RS16480 () | 3315575..3317092 | - | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| A9C00_RS16485 () | 3317329..3318786 | - | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| A9C00_RS16490 () | 3318845..3320992 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| A9C00_RS16495 () | 3321072..3322406 | - | 1335 | WP_065304295.1 | cadaverine/lysine antiporter | - |
| A9C00_RS16500 () | 3322772..3324310 | - | 1539 | WP_001187170.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| A9C00_RS16515 () | 3325109..3325684 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| A9C00_RS16520 () | 3325721..3327418 | - | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| A9C00_RS16525 () | 3327394..3327732 | - | 339 | WP_065304296.1 | divalent cation tolerance protein CutA | - |
| A9C00_RS16530 () | 3327848..3329149 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |