MGE detailed information
MGE type: Prophage MGE length: 61700 bp
Accession: NZ_CP015774 Location: 2675667..2737366 Organism: Lelliottia amnigena strain ZB04 Replicon: chromosome
Accession: NZ_CP015774 Location: 2675667..2737366 Organism: Lelliottia amnigena strain ZB04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A8A57_RS12765 () | 2670934..2672982 | - | 2049 | WP_064326432.1 | carboxy terminal-processing peptidase | - |
| A8A57_RS12770 () | 2673002..2673688 | - | 687 | WP_064326433.1 | RNA chaperone ProQ | - |
| A8A57_RS12775 () | 2673785..2674282 | - | 498 | WP_064326434.1 | GAF domain-containing protein | - |
| A8A57_RS12780 () | 2674415..2675698 | + | 1284 | WP_064326435.1 | membrane integrity lipid transport subunit YebS | - |
| A8A57_RS12785 () | 2675667..2678300 | + | 2634 | WP_064326436.1 | hypothetical protein | VF |
| A8A57_RS12790 () | 2678377..2679819 | + | 1443 | WP_198324734.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| A8A57_RS12795 () | 2679922..2680161 | + | 240 | WP_064326438.1 | YebV family protein | - |
| A8A57_RS12800 () | 2680266..2680457 | + | 192 | WP_064328147.1 | YebW family protein | - |
| A8A57_RS12805 () | 2680458..2681102 | - | 645 | WP_064326439.1 | protein-serine/threonine phosphatase | - |
| A8A57_RS12810 () | 2681272..2682213 | + | 942 | WP_064326440.1 | VirK/YbjX family protein | - |
| A8A57_RS12815 () | 2682871..2683746 | + | 876 | WP_157685358.1 | NmrA family NAD(P)-binding protein | - |
| A8A57_RS12820 () | 2683871..2684461 | + | 591 | WP_064326442.1 | TetR/AcrR family transcriptional regulator | - |
| A8A57_RS12825 () | 2684555..2684875 | - | 321 | WP_064326443.1 | hypothetical protein | - |
| A8A57_RS12835 () | 2685202..2685777 | - | 576 | WP_064326445.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| A8A57_RS12840 () | 2686198..2686608 | + | 411 | WP_082904971.1 | tail fiber domain-containing protein | - |
| A8A57_RS12845 () | 2686723..2687943 | - | 1221 | Protein_2469 | tail fiber domain-containing protein | - |
| A8A57_RS12850 () | 2688002..2688235 | - | 234 | WP_064326447.1 | hypothetical protein | - |
| A8A57_RS12855 () | 2688347..2689021 | - | 675 | WP_064326448.1 | hypothetical protein | - |
| A8A57_RS12860 () | 2689021..2689323 | - | 303 | WP_064326449.1 | hypothetical protein | - |
| A8A57_RS12865 () | 2689323..2692775 | - | 3453 | WP_064326450.1 | phage tail protein | - |
| A8A57_RS12870 () | 2692829..2693440 | - | 612 | WP_064326451.1 | tail assembly protein | - |
| A8A57_RS12875 () | 2693558..2693746 | + | 189 | WP_064326452.1 | hypothetical protein | - |
| A8A57_RS12880 () | 2693764..2694474 | - | 711 | WP_064326453.1 | C40 family peptidase | - |
| A8A57_RS12885 () | 2694477..2695232 | - | 756 | WP_064326454.1 | phage minor tail protein L | - |
| A8A57_RS12890 () | 2695229..2695576 | - | 348 | WP_064326455.1 | phage tail protein | - |
| A8A57_RS12895 () | 2695631..2695984 | - | 354 | WP_064326456.1 | hypothetical protein | - |
| A8A57_RS12900 () | 2696061..2698973 | - | 2913 | WP_064326457.1 | phage tail tape measure protein | - |
| A8A57_RS12905 () | 2698970..2699284 | - | 315 | WP_032645632.1 | DUF1799 domain-containing protein | - |
| A8A57_RS12910 () | 2699281..2699592 | - | 312 | WP_064326458.1 | hypothetical protein | - |
| A8A57_RS12915 () | 2699632..2700567 | - | 936 | WP_064326459.1 | Ig-like domain-containing protein | - |
| A8A57_RS12920 () | 2700637..2701047 | - | 411 | WP_064326460.1 | DUF4128 domain-containing protein | - |
| A8A57_RS12925 () | 2701044..2701628 | - | 585 | WP_064326461.1 | hypothetical protein | - |
| A8A57_RS12930 () | 2701630..2701980 | - | 351 | WP_064326462.1 | hypothetical protein | - |
| A8A57_RS12935 () | 2701982..2702464 | - | 483 | WP_064326463.1 | hypothetical protein | - |
| A8A57_RS12940 () | 2702501..2702800 | - | 300 | WP_198324771.1 | Ig-like domain-containing protein | - |
| A8A57_RS12945 () | 2702782..2703735 | - | 954 | WP_064326465.1 | Ig domain-containing protein | - |
| A8A57_RS12950 () | 2703746..2704519 | - | 774 | WP_064326466.1 | hypothetical protein | - |
| A8A57_RS12955 () | 2704600..2705697 | - | 1098 | WP_064326467.1 | hypothetical protein | - |
| A8A57_RS12960 () | 2705699..2707087 | - | 1389 | WP_064326468.1 | DUF4055 domain-containing protein | - |
| A8A57_RS12965 () | 2707089..2708395 | - | 1307 | Protein_2493 | terminase | - |
| A8A57_RS12970 () | 2708373..2709362 | - | 990 | WP_064326469.1 | terminase small subunit | - |
| A8A57_RS12975 () | 2709404..2709967 | + | 564 | WP_064326470.1 | hypothetical protein | - |
| A8A57_RS12980 () | 2710034..2710318 | - | 285 | WP_064326471.1 | hypothetical protein | - |
| A8A57_RS12985 () | 2710713..2710934 | - | 222 | WP_064326472.1 | hypothetical protein | - |
| A8A57_RS12990 () | 2711036..2711560 | - | 525 | WP_064326473.1 | Rha family transcriptional regulator | - |
| A8A57_RS12995 () | 2711912..2712376 | - | 465 | WP_064326474.1 | lysis protein | - |
| A8A57_RS13000 () | 2712373..2712867 | - | 495 | WP_064326475.1 | lysozyme | - |
| A8A57_RS13005 () | 2712845..2713069 | - | 225 | WP_064326476.1 | class II holin family protein | - |
| A8A57_RS13010 () | 2713786..2714601 | - | 816 | WP_064326477.1 | antitermination protein | - |
| A8A57_RS13015 () | 2714598..2714738 | - | 141 | WP_087892613.1 | YlcG family protein | - |
| A8A57_RS13020 () | 2714735..2715097 | - | 363 | WP_064328149.1 | RusA family crossover junction endodeoxyribonuclease | - |
| A8A57_RS13025 () | 2715100..2715306 | - | 207 | WP_071892390.1 | hypothetical protein | - |
| A8A57_RS13030 () | 2715306..2715908 | - | 603 | WP_064326478.1 | DUF1367 family protein | - |
| A8A57_RS13040 () | 2716297..2716521 | - | 225 | WP_064326479.1 | DinI family protein | - |
| A8A57_RS13045 () | 2717044..2717928 | + | 885 | WP_064326480.1 | hypothetical protein | - |
| A8A57_RS13050 () | 2718099..2719193 | - | 1095 | WP_064328150.1 | RelA/SpoT domain-containing protein | - |
| A8A57_RS13055 () | 2719406..2720092 | - | 687 | WP_064326481.1 | phage replication protein | - |
| A8A57_RS13060 () | 2720089..2721006 | - | 918 | WP_064328151.1 | replication protein | - |
| A8A57_RS13065 () | 2721090..2721641 | - | 552 | WP_064326482.1 | hypothetical protein | - |
| A8A57_RS13070 () | 2721644..2721871 | - | 228 | WP_064326483.1 | helix-turn-helix domain-containing protein | - |
| A8A57_RS13075 () | 2721944..2722357 | + | 414 | WP_082904973.1 | helix-turn-helix domain-containing protein | - |
| A8A57_RS13080 () | 2722449..2723471 | + | 1023 | WP_064326484.1 | hypothetical protein | - |
| A8A57_RS13085 () | 2723495..2724001 | + | 507 | WP_064326485.1 | hypothetical protein | - |
| A8A57_RS13095 () | 2724576..2724761 | + | 186 | WP_064326486.1 | hypothetical protein | - |
| A8A57_RS22165 () | 2724749..2725030 | - | 282 | WP_071892393.1 | hypothetical protein | - |
| A8A57_RS22265 () | 2725226..2725390 | + | 165 | WP_064326487.1 | hypothetical protein | - |
| A8A57_RS13105 () | 2725529..2728837 | + | 3309 | WP_064326488.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| A8A57_RS13110 () | 2728852..2729892 | + | 1041 | WP_064326489.1 | recombinase RecT | - |
| A8A57_RS13115 () | 2729932..2730174 | + | 243 | WP_064326490.1 | DUF4060 family protein | - |
| A8A57_RS13120 () | 2730239..2730511 | + | 273 | WP_064326491.1 | excisionase | - |
| A8A57_RS13125 () | 2730480..2731565 | + | 1086 | WP_064326492.1 | hypothetical protein ; Integrase | Integrase |
| - () | 2731636..2731811 | + | 176 | - | - | Antitoxin Detail |
| - () | 2731643..2731742 | - | 100 | - | - | Toxin Detail |
| A8A57_RS13130 () | 2731887..2732225 | - | 339 | WP_064326493.1 | YebY family protein | - |
| A8A57_RS13135 () | 2732240..2733112 | - | 873 | WP_064326494.1 | copper homeostasis membrane protein CopD | - |
| A8A57_RS13140 () | 2733114..2733488 | - | 375 | WP_064326495.1 | CopC domain-containing protein YobA | - |
| A8A57_RS13145 () | 2733626..2733856 | + | 231 | WP_064326496.1 | DNA polymerase III subunit theta | - |
| A8A57_RS13150 () | 2733966..2734622 | + | 657 | WP_064328153.1 | carbon-nitrogen hydrolase family protein | - |
| A8A57_RS13155 () | 2734647..2735309 | + | 663 | WP_064326497.1 | exodeoxyribonuclease X | - |
| A8A57_RS13160 () | 2735306..2737366 | - | 2061 | WP_064326498.1 | oligopeptidase B | - |
| A8A57_RS13165 () | 2737454..2738104 | - | 651 | WP_064326499.1 | tellurite resistance TerB family protein | - |
| A8A57_RS13170 () | 2738274..2739452 | + | 1179 | WP_064326500.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| A8A57_RS13175 () | 2739488..2740129 | - | 642 | WP_064326501.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| A8A57_RS13180 () | 2740167..2741978 | - | 1812 | WP_064326502.1 | phosphogluconate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|