MGE detailed information
MGE type: Prophage MGE length: 17007 bp
Accession: NZ_CP015749 Location: 3564060..3581066 Organism: Pectobacterium parmentieri strain RNS 08-42-1A Replicon: chromosome
Accession: NZ_CP015749 Location: 3564060..3581066 Organism: Pectobacterium parmentieri strain RNS 08-42-1A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A8F97_RS16140 () | 3559388..3562636 | - | 3249 | WP_033070789.1 | type I restriction endonuclease subunit R | - |
| A8F97_RS16145 () | 3562633..3564060 | - | 1428 | WP_033070788.1 | restriction endonuclease subunit S | - |
| A8F97_RS16150 () | 3564060..3566423 | - | 2364 | WP_033070787.1 | type I restriction-modification system subunit M | - |
| A8F97_RS16155 () | 3566771..3568033 | - | 1263 | WP_033070786.1 | Prophage integrase IntA ; Integrase | Integrase |
| A8F97_RS23420 () | 3568575..3568787 | + | 213 | WP_082218588.1 | DUF1133 family protein | - |
| A8F97_RS16160 () | 3568849..3569673 | + | 825 | WP_127087856.1 | hypothetical protein | - |
| A8F97_RS16165 () | 3569660..3570781 | + | 1122 | WP_033070785.1 | XRE family transcriptional regulator | - |
| A8F97_RS16170 () | 3570950..3571525 | - | 576 | WP_033070784.1 | PIN domain-containing protein | Toxin Detail |
| A8F97_RS16175 () | 3571525..3571986 | - | 462 | WP_033070783.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| A8F97_RS23425 () | 3572291..3572509 | + | 219 | Protein_3224 | hypothetical protein | - |
| A8F97_RS23435 () | 3572678..3572752 | - | 75 | Protein_3225 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| A8F97_RS24195 () | 3572967..3573218 | + | 252 | WP_127087855.1 | hypothetical protein | - |
| A8F97_RS16185 () | 3573765..3574643 | + | 879 | WP_033070781.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| A8F97_RS16190 () | 3574646..3574846 | + | 201 | WP_014698606.1 | AlpA family transcriptional regulator | - |
| A8F97_RS23440 () | 3574843..3575379 | + | 537 | WP_033070780.1 | ash family protein | - |
| A8F97_RS16200 () | 3575372..3577408 | + | 2037 | WP_033070779.1 | AAA family ATPase | - |
| A8F97_RS16205 () | 3577695..3578015 | + | 321 | WP_005971241.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| A8F97_RS16210 () | 3578005..3578289 | + | 285 | WP_005971242.1 | helix-turn-helix domain-containing protein | - |
| A8F97_RS23445 () | 3578498..3579729 | - | 1232 | Protein_3233 | hypothetical protein | - |
| A8F97_RS16225 () | 3579813..3581066 | - | 1254 | WP_033070776.1 | Prophage integrase IntA ; Integrase | Integrase |
| A8F97_RS16235 () | 3581588..3582664 | - | 1077 | WP_012822226.1 | LPS export ABC transporter permease LptG | - |
| A8F97_RS16240 () | 3582664..3583776 | - | 1113 | WP_033070775.1 | LPS export ABC transporter permease LptF | - |
| A8F97_RS16245 () | 3584058..3585569 | + | 1512 | WP_010284628.1 | leucyl aminopeptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|