MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 77900 bp
Accession: NZ_CP015640 Location: 1..77900 Organism: Pseudomonas lurida strain L228 Replicon: plasmid unnamed
Accession: NZ_CP015640 Location: 1..77900 Organism: Pseudomonas lurida strain L228 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7318_RS28000 () | 120..452 | - | 333 | WP_069078841.1 | ribbon-helix-helix protein, CopG family | - |
| A7318_RS28005 () | 707..934 | + | 228 | Protein_1 | mobilization protein | - |
| A7318_RS29220 () | 1140..1352 | - | 213 | WP_081327182.1 | hypothetical protein | - |
| A7318_RS28010 () | 1421..2257 | - | 837 | WP_069078785.1 | DUF945 domain-containing protein | - |
| A7318_RS28015 () | 2535..3509 | - | 975 | WP_069078786.1 | hypothetical protein | - |
| A7318_RS28020 () | 3506..4498 | - | 993 | WP_069078787.1 | ParB/RepB/Spo0J family partition protein | - |
| A7318_RS28025 () | 5293..5736 | - | 444 | WP_081327195.1 | hypothetical protein | - |
| A7318_RS29695 () | 6790..7104 | - | 315 | WP_145980406.1 | hypothetical protein | - |
| A7318_RS28035 () | 7147..7374 | - | 228 | WP_069078789.1 | hypothetical protein | - |
| A7318_RS28040 () | 7803..8024 | - | 222 | WP_069078790.1 | hypothetical protein | - |
| A7318_RS28045 () | 9363..10370 | - | 1008 | WP_069078791.1 | ParB/RepB/Spo0J family partition protein | - |
| A7318_RS28050 () | 10460..11593 | - | 1134 | WP_069078792.1 | ParA family protein | - |
| A7318_RS28055 () | 11677..11910 | - | 234 | WP_069078793.1 | hypothetical protein | - |
| A7318_RS28060 () | 11990..12400 | - | 411 | WP_069078794.1 | hypothetical protein | - |
| A7318_RS28065 () | 12913..13212 | + | 300 | WP_069078795.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A7318_RS28070 () | 13209..13505 | + | 297 | WP_069078796.1 | putative addiction module antidote protein | Antitoxin Detail |
| A7318_RS28075 () | 13618..14076 | - | 459 | WP_069078797.1 | hypothetical protein | - |
| A7318_RS28080 () | 14225..14776 | + | 552 | WP_069078798.1 | GNAT family N-acetyltransferase | - |
| A7318_RS28085 () | 14773..15750 | + | 978 | WP_069078799.1 | IS91 family transposase ISWz1 | Transposase |
| A7318_RS28090 () | 15793..16884 | - | 1092 | WP_069078800.1 | hypothetical protein | - |
| A7318_RS29865 () | 17131..17301 | - | 171 | WP_167356514.1 | hypothetical protein | - |
| A7318_RS29700 () | 18461..18727 | - | 267 | WP_145980407.1 | hypothetical protein | - |
| A7318_RS28100 () | 20075..22225 | + | 2151 | WP_069078802.1 | Autotransporter adhesin EhaG | VF |
| A7318_RS29230 () | 22670..23192 | + | 523 | Protein_23 | transposase | - |
| A7318_RS28110 () | 23599..27273 | - | 3675 | WP_069078804.1 | transporter substrate-binding domain-containing protein | - |
| A7318_RS28120 () | 27780..28351 | - | 572 | Protein_25 | ATP-binding protein | - |
| A7318_RS29705 () | 28340..28483 | + | 144 | Protein_26 | IS5/IS1182 family transposase | - |
| A7318_RS28125 () | 29033..29665 | - | 633 | WP_069078805.1 | response regulator transcription factor | - |
| A7318_RS29710 () | 30652..30828 | - | 177 | WP_145980409.1 | carbon storage regulator | - |
| A7318_RS28130 () | 31412..32324 | - | 913 | Protein_29 | DUF4113 domain-containing protein | - |
| A7318_RS29245 () | 32358..32684 | - | 327 | WP_081327187.1 | RulB protein | - |
| A7318_RS28135 () | 32681..33115 | - | 435 | WP_069078806.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| A7318_RS28140 () | 33377..34669 | - | 1293 | WP_081327188.1 | replication initiation protein | - |
| A7318_RS28145 () | 34859..35116 | - | 258 | WP_069078845.1 | plasmid replication protein RepB | - |
| A7318_RS28150 () | 35357..37684 | - | 2328 | WP_081327189.1 | hypothetical protein | VF |
| A7318_RS28155 () | 37671..38777 | - | 1107 | WP_069078807.1 | DsbC family protein | - |
| A7318_RS28160 () | 38907..40100 | - | 1194 | WP_069078808.1 | conjugal transfer protein | - |
| A7318_RS28165 () | 40242..40883 | - | 642 | WP_069078809.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| A7318_RS28170 () | 40894..41127 | - | 234 | WP_069078810.1 | helix-turn-helix transcriptional regulator | - |
| A7318_RS28175 () | 41236..43377 | - | 2142 | WP_069078811.1 | DotA/TraY family protein | - |
| A7318_RS28180 () | 43442..44035 | - | 594 | WP_069078812.1 | conjugal transfer protein TraX | - |
| A7318_RS28185 () | 44025..45236 | - | 1212 | WP_069078813.1 | conjugal transfer protein TraW | - |
| A7318_RS28190 () | 45250..48303 | - | 3054 | WP_069078814.1 | ATP-binding protein | - |
| A7318_RS28195 () | 48296..48859 | - | 564 | WP_145980411.1 | conjugal transfer protein TraT | - |
| A7318_RS28200 () | 48988..49371 | - | 384 | WP_069078816.1 | conjugal transfer protein TraR | - |
| A7318_RS28205 () | 49447..49989 | - | 543 | WP_069078817.1 | conjugal transfer protein TraQ | - |
| A7318_RS28210 () | 49998..50627 | - | 630 | WP_145980412.1 | conjugal transfer protein TraP | - |
| A7318_RS28215 () | 50711..52066 | - | 1356 | WP_069078819.1 | conjugal transfer protein TraO | - |
| A7318_RS28220 () | 52069..53088 | - | 1020 | WP_081327190.1 | hypothetical protein | VF |
| A7318_RS28225 () | 53173..53565 | - | 393 | WP_069078820.1 | hypothetical protein | - |
| A7318_RS28230 () | 53582..54298 | - | 717 | WP_081327191.1 | DotI/IcmL/TraM family protein | - |
| A7318_RS28235 () | 54298..54657 | - | 360 | WP_069078821.1 | conjugal transfer protein | - |
| A7318_RS28240 () | 54683..58246 | - | 3564 | WP_167356517.1 | DNA primase | - |
| A7318_RS28245 () | 58328..58609 | - | 282 | WP_167356518.1 | IcmT/TraK family protein | - |
| A7318_RS28250 () | 58603..59775 | - | 1173 | WP_081327192.1 | Twitching mobility protein | VF |
| A7318_RS28255 () | 59772..60551 | - | 780 | WP_167356519.1 | hypothetical protein | VF |
| A7318_RS28260 () | 60572..61030 | - | 459 | WP_069078825.1 | DotD/TraH family lipoprotein | - |
| A7318_RS28265 () | 61067..61558 | - | 492 | WP_069078826.1 | hypothetical protein | VF |
| A7318_RS28270 () | 61654..62118 | - | 465 | WP_069078827.1 | Type IV secretion system protein virB1 | VF |
| A7318_RS28275 () | 62118..63797 | - | 1680 | WP_069078828.1 | putative signaling protein | VF |
| A7318_RS29905 () | 63976..64320 | - | 345 | Protein_60 | hypothetical protein | VF |
| A7318_RS28285 () | 65144..66040 | - | 897 | WP_069078830.1 | putative protein YggR | VF |
| A7318_RS28290 () | 66059..66673 | - | 615 | WP_081327193.1 | hypothetical protein | - |
| A7318_RS28295 () | 66688..67752 | - | 1065 | WP_069078832.1 | type II secretion system F family protein | - |
| A7318_RS28300 () | 67749..69449 | - | 1701 | WP_069078833.1 | Flp pilus assembly complex ATPase component TadA | - |
| A7318_RS28305 () | 69463..70026 | - | 564 | WP_069078834.1 | hypothetical protein | - |
| A7318_RS28310 () | 70013..71317 | - | 1305 | WP_069078835.1 | type 4b pilus protein PilO2 | - |
| A7318_RS28315 () | 71317..73041 | - | 1725 | WP_167356515.1 | hypothetical protein | - |
| A7318_RS29875 () | 73083..73442 | - | 360 | WP_167356516.1 | hypothetical protein | VF |
| A7318_RS29715 () | 73802..74029 | - | 228 | WP_145980410.1 | hypothetical protein | - |
| A7318_RS28320 () | 74117..74659 | - | 543 | WP_069078837.1 | transcriptional regulator | - |
| A7318_RS28325 () | 74921..75268 | + | 348 | WP_069078838.1 | helix-turn-helix domain-containing protein | - |
| A7318_RS28330 () | 75422..75892 | + | 471 | WP_069078839.1 | hypothetical protein | - |
| A7318_RS28335 () | 76001..77887 | - | 1887 | WP_069078840.1 | Protein TraI | Relaxase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|