MGE detailed information
MGE type: Genomic_island MGE length: 20906 bp
Accession: NZ_CP015639 Location: 4802780..4823685 Organism: Pseudomonas lurida strain L228 Replicon: chromosome
Accession: NZ_CP015639 Location: 4802780..4823685 Organism: Pseudomonas lurida strain L228 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7318_RS21770 () | 4797803..4798348 | - | 546 | WP_069078194.1 | cytochrome b/b6 domain-containing protein | - |
| A7318_RS21775 () | 4798348..4798614 | - | 267 | WP_015885790.1 | PepSY domain-containing protein | - |
| A7318_RS21780 () | 4798762..4799424 | + | 663 | WP_034109279.1 | response regulator | - |
| A7318_RS21785 () | 4799421..4800773 | + | 1353 | WP_034109278.1 | sensor histidine kinase | - |
| A7318_RS21790 () | 4801158..4801730 | + | 573 | WP_069078195.1 | hypothetical protein | - |
| A7318_RS28980 () | 4801622..4802023 | - | 402 | Protein_4364 | hypothetical protein | - |
| A7318_RS21795 () | 4802132..4802755 | - | 624 | WP_069078196.1 | DUF3916 domain-containing protein | - |
| A7318_RS21800 () | 4802780..4803037 | - | 258 | WP_069078197.1 | colicin transporter | - |
| A7318_RS21805 () | 4803045..4804199 | - | 1155 | WP_069078198.1 | S-type pyocin domain-containing protein | - |
| A7318_RS21810 () | 4804392..4804862 | + | 471 | WP_069078199.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| A7318_RS21815 () | 4804859..4805434 | + | 576 | WP_034109273.1 | PIN domain-containing protein | Toxin Detail |
| A7318_RS21820 () | 4805553..4805924 | - | 372 | WP_034109272.1 | PH domain-containing protein | - |
| A7318_RS21825 () | 4806082..4806717 | + | 636 | WP_069078200.1 | LysE family translocator | - |
| A7318_RS21830 () | 4806724..4807053 | - | 330 | WP_069078201.1 | hypothetical protein | - |
| A7318_RS21835 () | 4807272..4808168 | + | 897 | WP_069078202.1 | hypothetical protein | - |
| A7318_RS21840 () | 4808199..4808483 | + | 285 | WP_069078203.1 | hypothetical protein | - |
| A7318_RS21845 () | 4808644..4809024 | - | 381 | WP_034109267.1 | cupin domain-containing protein | - |
| A7318_RS21850 () | 4809644..4809943 | - | 300 | WP_034109382.1 | antibiotic biosynthesis monooxygenase | - |
| A7318_RS21855 () | 4810042..4811052 | - | 1011 | WP_034109265.1 | zinc-binding alcohol dehydrogenase family protein | - |
| A7318_RS21860 () | 4811150..4812052 | + | 903 | WP_034109264.1 | LysR family transcriptional regulator | - |
| A7318_RS21865 () | 4812617..4812817 | - | 201 | WP_069078204.1 | KTSC domain-containing protein | - |
| A7318_RS21870 () | 4813071..4813814 | - | 744 | WP_069078205.1 | hypothetical protein | - |
| A7318_RS21875 () | 4814767..4814985 | + | 219 | WP_069078206.1 | hypothetical protein | - |
| A7318_RS21880 () | 4815116..4815643 | - | 528 | WP_069078207.1 | hypothetical protein | - |
| A7318_RS21885 () | 4815749..4816186 | - | 438 | WP_069078208.1 | hypothetical protein | - |
| A7318_RS28990 () | 4816732..4816964 | - | 233 | Protein_4384 | integrase | - |
| A7318_RS21895 () | 4817409..4818381 | + | 973 | Protein_4385 | hypothetical protein | - |
| A7318_RS21900 () | 4818508..4819404 | + | 897 | WP_145980385.1 | endonuclease/exonuclease/phosphatase family protein | - |
| A7318_RS21905 () | 4819406..4819855 | + | 450 | WP_069078211.1 | hypothetical protein | - |
| A7318_RS21910 () | 4820903..4821289 | - | 387 | WP_069078212.1 | hypothetical protein | - |
| A7318_RS21915 () | 4821837..4822016 | - | 180 | WP_069078213.1 | hypothetical protein | - |
| A7318_RS21920 () | 4822015..4822197 | - | 183 | Protein_4390 | hypothetical protein | - |
| A7318_RS21925 () | 4822444..4823685 | - | 1242 | Protein_4391 | hypothetical protein ; Integrase | Integrase |
| A7318_RS21935 () | 4824027..4825076 | + | 1050 | WP_034109263.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| A7318_RS21940 () | 4825082..4826197 | + | 1116 | WP_003175976.1 | tRNA guanosine(34) transglycosylase Tgt | - |
| A7318_RS21945 () | 4826241..4826579 | + | 339 | WP_003175975.1 | preprotein translocase subunit YajC | - |
| A7318_RS21950 () | 4826642..4828510 | + | 1869 | WP_034109262.1 | protein translocase subunit SecD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|