MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 52461 bp
Accession: NZ_CP015587 Location: 1..52461 Organism: Roseomonas gilardii strain U14-5 Replicon: plasmid 3
Accession: NZ_CP015587 Location: 1..52461 Organism: Roseomonas gilardii strain U14-5 Replicon: plasmid 3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RGI145_RS24340 () | 775..1023 | + | 249 | WP_075801110.1 | helix-turn-helix domain-containing protein | - |
| RGI145_RS24345 () | 1062..1415 | + | 354 | WP_075801111.1 | hypothetical protein | - |
| RGI145_RS24350 () | 1412..1813 | + | 402 | WP_075801112.1 | type II toxin-antitoxin system VapC family toxin | - |
| RGI145_RS24355 () | 2174..2923 | + | 750 | WP_075801113.1 | ParA family protein | - |
| RGI145_RS24360 () | 3586..4521 | + | 936 | WP_208864056.1 | plasmid replication initiator | - |
| RGI145_RS24365 () | 5100..5477 | - | 378 | WP_083671569.1 | hypothetical protein | - |
| RGI145_RS24370 () | 5459..5728 | - | 270 | WP_075801115.1 | BrnT family toxin | - |
| RGI145_RS24375 () | 5795..7993 | - | 2199 | WP_075801116.1 | ATP-dependent RecD-like DNA helicase | - |
| RGI145_RS24380 () | 8160..8399 | + | 240 | WP_075801117.1 | DUF4160 domain-containing protein | - |
| RGI145_RS24385 () | 8392..8793 | + | 402 | WP_075801118.1 | DUF2442 domain-containing protein | - |
| RGI145_RS24390 () | 9222..9404 | - | 183 | WP_075801119.1 | hypothetical protein | - |
| RGI145_RS24395 () | 9564..10781 | + | 1218 | WP_075801120.1 | AAA family ATPase | - |
| RGI145_RS24400 () | 10774..12879 | + | 2106 | WP_075801121.1 | S8 family serine peptidase | - |
| RGI145_RS24405 () | 13182..13592 | - | 411 | WP_083671571.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| RGI145_RS24410 () | 13589..13813 | - | 225 | WP_027283136.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| RGI145_RS24415 () | 13926..15059 | - | 1134 | WP_075801122.1 | site-specific integrase | - |
| RGI145_RS24420 () | 15323..16447 | + | 1125 | WP_075801123.1 | hypothetical protein | - |
| RGI145_RS24425 () | 16634..16966 | - | 333 | WP_075799516.1 | NIPSNAP family protein | - |
| RGI145_RS24430 () | 16988..18226 | - | 1239 | WP_075799517.1 | ABC transporter substrate-binding protein | - |
| RGI145_RS24435 () | 18280..20055 | - | 1776 | WP_075799518.1 | FAD-dependent oxidoreductase | - |
| RGI145_RS24440 () | 20143..21081 | - | 939 | WP_075801156.1 | FAD-binding protein | - |
| RGI145_RS24445 () | 21110..21859 | - | 750 | WP_075801124.1 | electron transfer flavoprotein subunit beta/FixA family protein | - |
| RGI145_RS24450 () | 21946..23337 | - | 1392 | WP_083671573.1 | MmgE/PrpD family protein | - |
| RGI145_RS24455 () | 23389..23724 | - | 336 | WP_075801126.1 | hypothetical protein | - |
| RGI145_RS24460 () | 23781..24230 | - | 450 | WP_075801127.1 | Zn-ribbon domain-containing OB-fold protein | - |
| RGI145_RS24465 () | 24227..25489 | - | 1263 | WP_083671575.1 | thiolase family protein | - |
| RGI145_RS24470 () | 25461..26615 | - | 1155 | WP_075801129.1 | acyl-CoA/acyl-ACP dehydrogenase | - |
| RGI145_RS24475 () | 26612..27109 | - | 498 | WP_075801130.1 | MaoC family dehydratase N-terminal domain-containing protein | - |
| RGI145_RS24480 () | 27132..27629 | - | 498 | WP_083671587.1 | MaoC family dehydratase N-terminal domain-containing protein | - |
| RGI145_RS24485 () | 27607..29757 | - | 2151 | WP_075801132.1 | acetate--CoA ligase family protein | - |
| RGI145_RS24490 () | 29900..31009 | - | 1110 | WP_075801133.1 | CoA transferase | - |
| RGI145_RS24495 () | 31038..31751 | - | 714 | WP_075801134.1 | nitroreductase | - |
| RGI145_RS24500 () | 31748..32716 | - | 969 | WP_075801135.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| RGI145_RS24505 () | 33018..33809 | + | 792 | WP_075801157.1 | GntR family transcriptional regulator | - |
| RGI145_RS24510 () | 34108..34320 | - | 213 | WP_167668439.1 | hypothetical protein | - |
| RGI145_RS24515 () | 34529..34813 | - | 285 | WP_156878789.1 | hypothetical protein | - |
| RGI145_RS24520 () | 34831..35382 | - | 552 | WP_075801138.1 | hypothetical protein | - |
| RGI145_RS24525 () | 35629..35892 | + | 264 | WP_075801139.1 | helix-turn-helix domain-containing protein | - |
| RGI145_RS24530 () | 36632..37225 | + | 594 | WP_075801140.1 | hypothetical protein | - |
| RGI145_RS24535 () | 37465..39216 | + | 1752 | WP_075801141.1 | DUF4214 domain-containing protein | - |
| RGI145_RS24540 () | 39407..40498 | - | 1092 | WP_075801142.1 | site-specific integrase | - |
| RGI145_RS24545 () | 40495..42306 | - | 1812 | WP_075801143.1 | site-specific integrase | - |
| RGI145_RS24550 () | 42431..42652 | - | 222 | WP_075801144.1 | IS607 family transposase ISDka1 | Transposase |
| RGI145_RS24555 () | 42976..43914 | - | 939 | WP_156878790.1 | hypothetical protein | - |
| RGI145_RS24560 () | 44406..46064 | - | 1659 | WP_075801146.1 | DUF697 domain-containing protein | - |
| RGI145_RS24565 () | 46121..46882 | + | 762 | WP_075801147.1 | hypothetical protein | - |
| RGI145_RS24580 () | 47729..48085 | + | 357 | WP_075801149.1 | hypothetical protein | - |
| RGI145_RS24585 () | 48113..49042 | - | 930 | WP_075801150.1 | LysR family transcriptional regulator | - |
| RGI145_RS24590 () | 49178..49891 | + | 714 | WP_075801151.1 | C-factor | VF |
| RGI145_RS24595 () | 49964..50356 | - | 393 | WP_075801152.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| RGI145_RS24600 () | 50353..50580 | - | 228 | WP_019463481.1 | hypothetical protein | - |
| RGI145_RS24605 () | 50710..51729 | - | 1020 | WP_075801153.1 | DUF697 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|