MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 102180 bp
Accession: NZ_CP015420 Location: 1..102180 Organism: Rhodovulum sulfidophilum DSM 1374 Replicon: plasmid unnamed2
Accession: NZ_CP015420 Location: 1..102180 Organism: Rhodovulum sulfidophilum DSM 1374 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6W98_RS19615 () | 1000..2253 | + | 1254 | WP_168161855.1 | DUF4123 domain-containing protein | - |
| A6W98_RS19620 () | 2253..3995 | + | 1743 | WP_042465782.1 | hypothetical protein | - |
| A6W98_RS19625 () | 3982..5013 | + | 1032 | WP_042465785.1 | hypothetical protein | - |
| A6W98_RS19630 () | 5055..6080 | + | 1026 | WP_063491339.1 | hypothetical protein | - |
| A6W98_RS19635 () | 6647..8176 | - | 1530 | WP_042465791.1 | tripartite tricarboxylate transporter permease | - |
| A6W98_RS19640 () | 8178..8666 | - | 489 | WP_042465794.1 | tripartite tricarboxylate transporter TctB family protein | - |
| A6W98_RS19645 () | 8791..9774 | - | 984 | WP_052678185.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| A6W98_RS19650 () | 9910..11631 | - | 1722 | WP_168161856.1 | thiamine pyrophosphate-binding protein | - |
| A6W98_RS19655 () | 11891..12577 | + | 687 | WP_042465799.1 | GntR family transcriptional regulator | - |
| A6W98_RS19660 () | 12565..13485 | - | 921 | WP_042465801.1 | LysR family transcriptional regulator | - |
| A6W98_RS19665 () | 13824..15029 | + | 1206 | WP_042465804.1 | pyridoxal phosphate-dependent aminotransferase | - |
| A6W98_RS19670 () | 15026..15694 | + | 669 | WP_052678175.1 | RraA family protein | - |
| A6W98_RS19675 () | 15742..16689 | + | 948 | WP_042465807.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| A6W98_RS19680 () | 16708..17160 | + | 453 | WP_052678176.1 | tripartite tricarboxylate transporter TctB family protein | - |
| A6W98_RS19685 () | 17168..18667 | + | 1500 | WP_042465928.1 | tripartite tricarboxylate transporter permease | - |
| A6W98_RS19690 () | 18740..19654 | - | 915 | WP_042465810.1 | HTH-type transcriptional regulator CynR | VF |
| A6W98_RS19695 () | 19728..22541 | + | 2814 | WP_042465812.1 | FAD-binding oxidoreductase | - |
| A6W98_RS19700 () | 22569..23258 | - | 690 | WP_042465814.1 | GntR family transcriptional regulator | - |
| A6W98_RS19705 () | 23438..24433 | + | 996 | WP_042465817.1 | 2-haloacrylate reductase | VF |
| A6W98_RS19710 () | 24539..25738 | + | 1200 | WP_042465819.1 | ABC transporter substrate-binding protein | - |
| A6W98_RS19715 () | 25957..26841 | + | 885 | WP_042465822.1 | branched-chain amino acid ABC transporter permease | - |
| A6W98_RS19720 () | 26852..28684 | + | 1833 | WP_081257635.1 | branched-chain amino acid ABC transporter ATP-binding protein/permease | - |
| A6W98_RS19725 () | 28671..29375 | + | 705 | WP_042465827.1 | High-affinity branched-chain amino acid transport ATP-binding protein LivF | VF |
| A6W98_RS19730 () | 29378..30178 | + | 801 | WP_042465932.1 | putative oxidoreductase | VF |
| A6W98_RS19735 () | 30187..30996 | + | 810 | WP_042465830.1 | shikimate dehydrogenase | - |
| A6W98_RS19740 () | 31008..32621 | + | 1614 | WP_042465832.1 | GMC family oxidoreductase N-terminal domain-containing protein | - |
| A6W98_RS19745 () | 32649..34079 | + | 1431 | WP_042465935.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| A6W98_RS19750 () | 34219..34629 | - | 411 | WP_042465833.1 | GFA family protein | - |
| A6W98_RS19755 () | 34626..35330 | - | 705 | WP_042465835.1 | FadR family transcriptional regulator | - |
| A6W98_RS19760 () | 35556..36332 | + | 777 | WP_042465837.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| A6W98_RS19765 () | 36343..37083 | + | 741 | WP_042465838.1 | Gluconate 5-dehydrogenase | VF |
| A6W98_RS19770 () | 37107..39299 | + | 2193 | WP_042465840.1 | alpha-ketoacid dehydrogenase subunit alpha/beta | - |
| A6W98_RS19775 () | 39348..40589 | + | 1242 | WP_042465843.1 | 2-oxo acid dehydrogenase subunit E2 | - |
| A6W98_RS19780 () | 40772..41578 | + | 807 | WP_042465845.1 | HTH-type transcriptional activator RhaS | VF |
| A6W98_RS19785 () | 41645..42046 | + | 402 | WP_052678177.1 | DUF2000 domain-containing protein | - |
| A6W98_RS19790 () | 42046..42642 | + | 597 | WP_042465847.1 | LysE family translocator | - |
| A6W98_RS19795 () | 42825..44273 | + | 1449 | WP_042465849.1 | helix-turn-helix transcriptional regulator | - |
| A6W98_RS19800 () | 44371..44871 | - | 501 | WP_042465852.1 | hypothetical protein | - |
| A6W98_RS19805 () | 44901..45386 | - | 486 | WP_052678178.1 | DUF805 domain-containing protein | - |
| A6W98_RS19810 () | 45383..46516 | - | 1134 | WP_042465854.1 | hypothetical protein | - |
| A6W98_RS19815 () | 46513..48669 | - | 2157 | WP_042465856.1 | hypothetical protein | - |
| A6W98_RS19820 () | 48870..49418 | - | 549 | WP_042465857.1 | DUF2478 domain-containing protein | - |
| A6W98_RS19825 () | 49513..51972 | - | 2460 | WP_042465859.1 | trimethylamine-N-oxide reductase TorA | - |
| A6W98_RS19830 () | 51984..52634 | - | 651 | WP_042465861.1 | molecular chaperone TorD family protein | - |
| A6W98_RS19835 () | 52631..54256 | - | 1626 | WP_042465862.1 | c-type cytochrome | - |
| A6W98_RS19840 () | 54452..56818 | + | 2367 | WP_052678179.1 | response regulator | - |
| A6W98_RS19845 () | 56815..57498 | + | 684 | WP_042465864.1 | Transcriptional regulatory protein OmpR | VF |
| A6W98_RS19850 () | 57618..58640 | + | 1023 | WP_042465866.1 | LLM class flavin-dependent oxidoreductase | - |
| A6W98_RS19855 () | 58733..58993 | + | 261 | WP_042465868.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| A6W98_RS19860 () | 58993..59394 | + | 402 | WP_042465871.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| A6W98_RS19865 () | 59405..60598 | - | 1194 | WP_042465873.1 | replication initiation protein | - |
| A6W98_RS19870 () | 61193..62596 | + | 1404 | WP_042465875.1 | AAA family ATPase | - |
| A6W98_RS19875 () | 62598..63692 | + | 1095 | WP_042465877.1 | ParB/RepB/Spo0J family partition protein | - |
| A6W98_RS19880 () | 63817..65760 | + | 1944 | WP_042465879.1 | Actin cross-linking toxin VgrG1 | VF |
| A6W98_RS19885 () | 65774..66028 | + | 255 | WP_042465880.1 | hypothetical protein | VF |
| A6W98_RS19890 () | 66105..67379 | + | 1275 | WP_052678180.1 | hypothetical protein | VF |
| A6W98_RS19895 () | 67486..68832 | + | 1347 | WP_042465882.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| A6W98_RS19900 () | 68976..69503 | + | 528 | WP_042465884.1 | hypothetical protein | VF |
| A6W98_RS19905 () | 69526..71019 | + | 1494 | WP_042465886.1 | hypothetical protein | VF |
| A6W98_RS19910 () | 71092..71589 | + | 498 | WP_042465888.1 | Protein hcp1 | VF |
| A6W98_RS19915 () | 71697..72290 | + | 594 | WP_042465890.1 | type VI secretion system baseplate subunit TssE | - |
| A6W98_RS19920 () | 72287..74215 | + | 1929 | WP_042465892.1 | hypothetical protein | VF |
| A6W98_RS19925 () | 74212..75267 | + | 1056 | WP_052678181.1 | hypothetical protein | VF |
| A6W98_RS19930 () | 75297..78035 | + | 2739 | WP_042465894.1 | Protein ClpV1 | VF |
| A6W98_RS19935 () | 78032..79066 | + | 1035 | WP_042465896.1 | hypothetical protein | - |
| A6W98_RS19940 () | 79077..80813 | - | 1737 | WP_052678182.1 | hypothetical protein | - |
| A6W98_RS19945 () | 80810..81541 | - | 732 | WP_042465898.1 | hypothetical protein | - |
| A6W98_RS19950 () | 81633..82046 | - | 414 | WP_052678183.1 | DUF1036 domain-containing protein | - |
| A6W98_RS19955 () | 82204..82722 | + | 519 | WP_042465900.1 | hypothetical protein | - |
| A6W98_RS19960 () | 82913..83263 | + | 351 | WP_052678186.1 | hypothetical protein | - |
| A6W98_RS19965 () | 83295..83939 | + | 645 | WP_178390643.1 | MotA/TolQ/ExbB proton channel family protein | - |
| A6W98_RS19970 () | 83946..84404 | + | 459 | WP_042465904.1 | biopolymer transporter ExbD | - |
| A6W98_RS19975 () | 84409..84834 | + | 426 | WP_042465906.1 | hypothetical protein | - |
| A6W98_RS19980 () | 84831..86039 | + | 1209 | WP_042465909.1 | hypothetical protein | - |
| A6W98_RS19985 () | 86267..92911 | + | 6645 | WP_155734915.1 | hypothetical protein | - |
| A6W98_RS19990 () | 92988..94319 | + | 1332 | WP_042465913.1 | hypothetical protein | VF |
| A6W98_RS19995 () | 94319..95860 | + | 1542 | WP_052678184.1 | Motility protein B | VF |
| A6W98_RS20000 () | 95908..99504 | + | 3597 | WP_155734916.1 | hypothetical protein | VF |
| A6W98_RS20005 () | 99501..100190 | + | 690 | WP_042465917.1 | hypothetical protein | VF |
| A6W98_RS20010 () | 100187..100966 | + | 780 | WP_042465919.1 | Protein phosphatase PrpC | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|