MGE detailed information
MGE type: Prophage MGE length: 88812 bp
Accession: NZ_CP015418 Location: 2442098..2530909 Organism: Rhodovulum sulfidophilum DSM 1374 Replicon: chromosome
Accession: NZ_CP015418 Location: 2442098..2530909 Organism: Rhodovulum sulfidophilum DSM 1374 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6W98_RS20375 () | 2439516..2440112 | + | 597 | WP_072071683.1 | hypothetical protein | - |
| A6W98_RS11530 () | 2440306..2441700 | + | 1395 | WP_042461633.1 | PLP-dependent aminotransferase family protein | - |
| A6W98_RS21100 () | 2441951..2442397 | - | 447 | WP_155734786.1 | hypothetical protein | - |
| A6W98_RS21105 () | 2442732..2443721 | - | 990 | WP_155734787.1 | hypothetical protein | - |
| A6W98_RS11545 () | 2444609..2445646 | - | 1038 | WP_042461639.1 | hypothetical protein | - |
| A6W98_RS21110 () | 2446007..2446537 | - | 531 | WP_155734788.1 | hypothetical protein | - |
| A6W98_RS20380 () | 2446751..2448202 | - | 1452 | WP_196760178.1 | AAA family ATPase | - |
| A6W98_RS11550 () | 2448641..2449447 | - | 807 | WP_063490981.1 | DNA adenine methylase | - |
| A6W98_RS11555 () | 2449817..2450146 | - | 330 | WP_042464309.1 | bacteriophage spanin2 family protein | - |
| A6W98_RS11560 () | 2450143..2450652 | - | 510 | WP_042464308.1 | lysozyme | - |
| A6W98_RS11565 () | 2450657..2450869 | - | 213 | WP_042464306.1 | hypothetical protein | - |
| A6W98_RS11570 () | 2450895..2451182 | - | 288 | WP_042461673.1 | hypothetical protein | - |
| A6W98_RS11575 () | 2451253..2452098 | - | 846 | WP_042464304.1 | hypothetical protein | - |
| A6W98_RS11580 () | 2452106..2454769 | - | 2664 | WP_155734789.1 | hypothetical protein | - |
| A6W98_RS11585 () | 2454754..2455161 | - | 408 | WP_052678015.1 | hypothetical protein | - |
| A6W98_RS11590 () | 2455158..2455682 | - | 525 | WP_042461645.1 | hypothetical protein | - |
| A6W98_RS11595 () | 2455682..2456050 | - | 369 | WP_042461647.1 | hypothetical protein | - |
| A6W98_RS11600 () | 2456128..2456508 | + | 381 | Protein_2355 | hypothetical protein | - |
| A6W98_RS11605 () | 2456508..2456798 | + | 291 | WP_042461650.1 | hypothetical protein | - |
| A6W98_RS11610 () | 2456946..2458085 | + | 1140 | WP_063490915.1 | hypothetical protein ; Integrase | Integrase |
| A6W98_RS11615 () | 2458428..2460941 | + | 2514 | WP_196760179.1 | CRISPR-associated helicase Cas3' | - |
| A6W98_RS11620 () | 2461013..2462473 | + | 1461 | WP_081251909.1 | type I-E CRISPR-associated protein Cse1/CasA | - |
| A6W98_RS11625 () | 2462470..2462964 | + | 495 | WP_042461657.1 | type I-E CRISPR-associated protein Cse2/CasB | - |
| A6W98_RS11630 () | 2462961..2464025 | + | 1065 | WP_042461659.1 | type I-E CRISPR-associated protein Cas7/Cse4/CasC | - |
| A6W98_RS11635 () | 2464025..2464717 | + | 693 | WP_052678016.1 | type I-E CRISPR-associated protein Cas5/CasD | - |
| A6W98_RS11640 () | 2464714..2465385 | + | 672 | WP_042461660.1 | type I-E CRISPR-associated protein Cas6/Cse3/CasE | - |
| A6W98_RS11645 () | 2465424..2466326 | + | 903 | WP_207759093.1 | type I-E CRISPR-associated endonuclease Cas1 | - |
| A6W98_RS11650 () | 2466330..2466620 | + | 291 | WP_042461665.1 | type I-E CRISPR-associated endoribonuclease Cas2 | - |
| A6W98_RS11655 () | 2468381..2468704 | - | 324 | WP_042461667.1 | bacteriophage spanin2 family protein | - |
| A6W98_RS11660 () | 2468701..2469210 | - | 510 | WP_042461669.1 | lysozyme | - |
| A6W98_RS11665 () | 2469215..2469427 | - | 213 | WP_042461671.1 | hypothetical protein | - |
| A6W98_RS11670 () | 2469452..2469739 | - | 288 | WP_042461673.1 | hypothetical protein | - |
| A6W98_RS11675 () | 2469774..2470583 | - | 810 | WP_042462587.1 | hypothetical protein | - |
| A6W98_RS11680 () | 2470591..2473230 | - | 2640 | WP_063490916.1 | hypothetical protein | - |
| A6W98_RS11685 () | 2473215..2473622 | - | 408 | WP_042461678.1 | hypothetical protein | - |
| A6W98_RS11690 () | 2473619..2474143 | - | 525 | WP_042461680.1 | hypothetical protein | - |
| A6W98_RS11695 () | 2474237..2474422 | + | 186 | WP_211138697.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| A6W98_RS11700 () | 2474439..2474831 | + | 393 | WP_042461682.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| A6W98_RS11705 () | 2474840..2475430 | - | 591 | WP_063490917.1 | hypothetical protein | - |
| A6W98_RS11710 () | 2475430..2476113 | - | 684 | WP_052678017.1 | hypothetical protein | - |
| A6W98_RS11715 () | 2476091..2476642 | + | 552 | Protein_2378 | hypothetical protein | - |
| A6W98_RS11720 () | 2476642..2476932 | + | 291 | WP_042461688.1 | hypothetical protein | - |
| A6W98_RS11725 () | 2477080..2478219 | + | 1140 | WP_042461690.1 | hypothetical protein ; Integrase | Integrase |
| A6W98_RS11730 () | 2478819..2479283 | + | 465 | WP_042461692.1 | carboxymuconolactone decarboxylase family protein | - |
| A6W98_RS11735 () | 2479270..2480223 | + | 954 | WP_052678018.1 | RNA polymerase sigma factor SigJ | - |
| A6W98_RS11740 () | 2480730..2482625 | + | 1896 | WP_042461694.1 | hypothetical protein | - |
| A6W98_RS11745 () | 2483379..2484083 | + | 705 | WP_042461696.1 | hypothetical protein | - |
| A6W98_RS20385 () | 2484306..2485121 | + | 816 | WP_072071685.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| A6W98_RS11750 () | 2485476..2486051 | - | 576 | WP_081251911.1 | HNH endonuclease family protein | - |
| A6W98_RS11755 () | 2486114..2486920 | - | 807 | WP_063490983.1 | DNA adenine methylase | - |
| A6W98_RS11760 () | 2487290..2487619 | - | 330 | WP_042464309.1 | bacteriophage spanin2 family protein | - |
| A6W98_RS11765 () | 2487616..2488125 | - | 510 | WP_042464308.1 | lysozyme | - |
| A6W98_RS11770 () | 2488130..2488342 | - | 213 | WP_042464306.1 | hypothetical protein | - |
| A6W98_RS11775 () | 2488368..2488655 | - | 288 | WP_042461673.1 | hypothetical protein | - |
| A6W98_RS11780 () | 2488726..2489571 | - | 846 | WP_042464304.1 | hypothetical protein | - |
| A6W98_RS11785 () | 2489579..2492206 | - | 2628 | WP_063490918.1 | hypothetical protein | - |
| A6W98_RS11790 () | 2492191..2492598 | - | 408 | WP_052678019.1 | hypothetical protein | - |
| A6W98_RS11795 () | 2492598..2493122 | - | 525 | WP_042461708.1 | hypothetical protein | - |
| A6W98_RS11800 () | 2493122..2493718 | - | 597 | WP_042461710.1 | hypothetical protein | - |
| A6W98_RS21675 () | 2493718..2495727 | - | 2010 | WP_052678020.1 | hypothetical protein | - |
| A6W98_RS11810 () | 2495743..2496054 | - | 312 | WP_052678021.1 | hypothetical protein | - |
| A6W98_RS11815 () | 2496051..2496404 | - | 354 | WP_042461712.1 | gene transfer agent family protein | - |
| A6W98_RS11820 () | 2496401..2496823 | - | 423 | WP_042461713.1 | hypothetical protein | - |
| A6W98_RS11825 () | 2496820..2497206 | - | 387 | WP_042465011.1 | DUF3168 domain-containing protein | - |
| A6W98_RS11830 () | 2497259..2497720 | - | 462 | WP_042461714.1 | HK97 gp10 family phage protein | - |
| A6W98_RS11835 () | 2497717..2498058 | - | 342 | WP_042461715.1 | head-tail adaptor protein | - |
| A6W98_RS11840 () | 2498058..2498351 | - | 294 | WP_042461716.1 | head-tail connector protein | - |
| A6W98_RS11845 () | 2498348..2498560 | - | 213 | WP_042461717.1 | hypothetical protein | - |
| A6W98_RS11850 () | 2498630..2499937 | - | 1308 | WP_042465014.1 | phage major capsid protein | - |
| A6W98_RS11855 () | 2499997..2500845 | - | 849 | WP_042461719.1 | Clp protease ClpP | - |
| A6W98_RS11860 () | 2500842..2502077 | - | 1236 | WP_042461721.1 | phage portal protein | - |
| A6W98_RS11865 () | 2502074..2503807 | - | 1734 | WP_042461723.1 | terminase large subunit | - |
| A6W98_RS11870 () | 2503804..2504274 | - | 471 | WP_042461724.1 | hypothetical protein | - |
| A6W98_RS11875 () | 2504365..2504733 | - | 369 | WP_042461726.1 | endonuclease | - |
| A6W98_RS21120 () | 2504886..2505344 | - | 459 | WP_143540171.1 | hypothetical protein | - |
| A6W98_RS11880 () | 2505402..2506064 | - | 663 | WP_063490919.1 | hypothetical protein | - |
| A6W98_RS21125 () | 2506061..2506708 | - | 648 | WP_063490920.1 | hypothetical protein | - |
| A6W98_RS11890 () | 2506705..2507277 | - | 573 | WP_042461732.1 | hypothetical protein | - |
| A6W98_RS11895 () | 2507536..2508153 | - | 618 | WP_042461734.1 | hypothetical protein | - |
| A6W98_RS11900 () | 2508190..2508732 | - | 543 | WP_052678024.1 | hypothetical protein | - |
| A6W98_RS11905 () | 2508732..2509004 | - | 273 | WP_042465016.1 | DUF2312 domain-containing protein | - |
| A6W98_RS11910 () | 2509258..2509434 | - | 177 | WP_155734791.1 | hypothetical protein | - |
| A6W98_RS11915 () | 2509606..2509866 | + | 261 | WP_042461741.1 | hypothetical protein | - |
| A6W98_RS11920 () | 2509885..2510175 | + | 291 | WP_042461743.1 | hypothetical protein | - |
| A6W98_RS11925 () | 2510181..2510894 | + | 714 | WP_042461745.1 | hypothetical protein | - |
| A6W98_RS11930 () | 2510894..2511184 | + | 291 | WP_042461650.1 | hypothetical protein | - |
| A6W98_RS11935 () | 2511332..2512471 | + | 1140 | WP_063490915.1 | hypothetical protein ; Integrase | Integrase |
| A6W98_RS11945 () | 2512870..2514216 | + | 1347 | WP_081251914.1 | ABC transporter substrate-binding protein | - |
| A6W98_RS11950 () | 2514289..2515212 | + | 924 | WP_042461749.1 | branched-chain amino acid ABC transporter permease | - |
| A6W98_RS11955 () | 2515209..2516150 | + | 942 | WP_042461751.1 | branched-chain amino acid ABC transporter permease | - |
| A6W98_RS11960 () | 2516147..2516872 | + | 726 | WP_042461753.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| A6W98_RS11965 () | 2516865..2517560 | + | 696 | WP_042461755.1 | ABC transporter ATP-binding protein | - |
| A6W98_RS11970 () | 2517749..2518426 | + | 678 | WP_042461756.1 | class I SAM-dependent methyltransferase | - |
| A6W98_RS11975 () | 2518975..2519988 | - | 1014 | WP_168161828.1 | LysR family transcriptional regulator | - |
| A6W98_RS11980 () | 2520080..2521234 | + | 1155 | WP_042461758.1 | acyl-CoA/acyl-ACP dehydrogenase | - |
| A6W98_RS11985 () | 2521234..2522328 | + | 1095 | WP_042461760.1 | CoA transferase | - |
| A6W98_RS11990 () | 2522329..2523159 | + | 831 | WP_042461762.1 | MaoC family dehydratase N-terminal domain-containing protein | - |
| A6W98_RS11995 () | 2523450..2526110 | + | 2661 | WP_052678026.1 | bifunctional lysylphosphatidylglycerol flippase/synthetase MprF | - |
| A6W98_RS12000 () | 2526378..2527952 | + | 1575 | WP_042461764.1 | ABC transporter substrate-binding protein | - |
| A6W98_RS12005 () | 2528040..2528993 | + | 954 | WP_042461766.1 | ABC transporter permease | - |
| A6W98_RS12010 () | 2528998..2529882 | + | 885 | WP_042461768.1 | ABC transporter permease | - |
| A6W98_RS12015 () | 2529869..2530909 | + | 1041 | WP_042461770.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| A6W98_RS12020 () | 2530906..2531886 | + | 981 | WP_042461772.1 | ABC transporter ATP-binding protein | - |
| A6W98_RS12025 () | 2531891..2533066 | + | 1176 | WP_042461774.1 | amidase | - |
| A6W98_RS12030 () | 2533063..2533530 | + | 468 | WP_042461776.1 | RidA family protein | - |
| A6W98_RS12035 () | 2533569..2534375 | - | 807 | WP_042465024.1 | ABC transporter ATP-binding protein | - |
| A6W98_RS12040 () | 2534416..2535429 | - | 1014 | WP_042461778.1 | ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|