MGE detailed information
MGE type: Conjugative plasmid MGE length: 139933 bp
Accession: NZ_CP015387 Location: 1..139933 Organism: Klebsiella pneumoniae strain NY9 Replicon: plasmid pNY9_2
Accession: NZ_CP015387 Location: 1..139933 Organism: Klebsiella pneumoniae strain NY9 Replicon: plasmid pNY9_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6P56_RS29360 () | 49..804 | + | 756 | WP_012539983.1 | replication initiation protein RepE | - |
| A6P56_RS29365 () | 892..2430 | - | 1539 | WP_022644883.1 | IS66 family transposase ISKpn24 | Transposase |
| A6P56_RS29370 () | 2479..2826 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| A6P56_RS29375 () | 2823..3227 | - | 405 | WP_007372134.1 | IS66 family transposase ISKpn24 | Transposase |
| A6P56_RS29385 () | 4009..5214 | + | 1206 | WP_015632469.1 | AAA family ATPase | - |
| A6P56_RS29390 () | 5214..6188 | + | 975 | WP_022644882.1 | ParB/RepB/Spo0J family partition protein | - |
| A6P56_RS29395 () | 6270..7541 | - | 1272 | WP_022644881.1 | Y-family DNA polymerase | - |
| A6P56_RS29400 () | 7541..7972 | - | 432 | WP_020805749.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| A6P56_RS29405 () | 8205..9176 | + | 972 | WP_001568038.1 | hypothetical protein | - |
| A6P56_RS29410 () | 9179..9850 | + | 672 | WP_022644880.1 | plasmid partitioning/stability family protein | - |
| A6P56_RS29415 () | 9912..10142 | + | 231 | WP_001568040.1 | hypothetical protein | - |
| A6P56_RS29425 () | 10579..11280 | + | 702 | WP_004152355.1 | DNA methylase | - |
| A6P56_RS29430 () | 11280..11501 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| A6P56_RS29435 () | 11511..11930 | + | 420 | WP_022644879.1 | DUF1380 domain-containing protein | - |
| A6P56_RS29440 () | 11984..12751 | + | 768 | WP_022644878.1 | hypothetical protein | - |
| A6P56_RS34415 () | 13432..13860 | + | 429 | WP_022644877.1 | antirestriction protein | - |
| A6P56_RS29455 () | 13903..14409 | + | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| A6P56_RS29460 () | 14452..14643 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| A6P56_RS29465 () | 14831..15094 | + | 264 | WP_022644876.1 | DNA polymerase III subunit theta | - |
| A6P56_RS29470 () | 15119..15439 | + | 321 | WP_022644875.1 | hypothetical protein | - |
| A6P56_RS29485 () | 16240..16797 | + | 558 | WP_020314935.1 | single-stranded DNA-binding protein | - |
| A6P56_RS29490 () | 16847..17095 | + | 249 | WP_020314938.1 | DUF905 domain-containing protein | - |
| A6P56_RS29495 () | 17164..19164 | + | 2001 | WP_020314932.1 | ParB/RepB/Spo0J family partition protein | - |
| A6P56_RS29500 () | 19205..19639 | + | 435 | WP_032072073.1 | conjugation system SOS inhibitor PsiB | - |
| A6P56_RS29505 () | 19636..20364 | + | 729 | WP_032072072.1 | plasmid SOS inhibition protein A | - |
| A6P56_RS29510 () | 20361..20684 | + | 324 | WP_022644947.1 | hypothetical protein | - |
| A6P56_RS29520 () | 21480..21707 | + | 228 | WP_022644716.1 | hypothetical protein | - |
| A6P56_RS29525 () | 21800..22030 | + | 231 | WP_020804025.1 | hypothetical protein | - |
| A6P56_RS29530 () | 22079..22954 | + | 876 | WP_022644946.1 | DUF4942 domain-containing protein | - |
| A6P56_RS29550 () | 23740..24078 | + | 339 | WP_022644945.1 | hypothetical protein | - |
| A6P56_RS29555 () | 24134..24481 | + | 348 | WP_022644944.1 | hypothetical protein | - |
| A6P56_RS29560 () | 24574..24720 | + | 147 | WP_022644943.1 | hypothetical protein | - |
| A6P56_RS34145 () | 24768..25310 | + | 543 | WP_022644942.1 | hypothetical protein | - |
| A6P56_RS29570 () | 25353..25895 | + | 543 | WP_022644941.1 | antirestriction protein | - |
| A6P56_RS29575 () | 25919..26401 | - | 483 | WP_022644940.1 | hypothetical protein | VF |
| A6P56_RS29580 () | 26847..27239 | + | 393 | WP_022644939.1 | relaxosome protein TraM | - |
| A6P56_RS29585 () | 27474..28175 | + | 702 | WP_022644938.1 | hypothetical protein | - |
| A6P56_RS29590 () | 28260..28460 | + | 201 | WP_032072063.1 | TraY domain-containing protein | - |
| A6P56_RS29595 () | 28529..28897 | + | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| A6P56_RS29600 () | 28911..29216 | + | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| A6P56_RS29605 () | 29236..29802 | + | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| A6P56_RS29610 () | 29789..30529 | + | 741 | WP_004152497.1 | type-F conjugative transfer system secretin TraK | - |
| A6P56_RS29615 () | 30529..31953 | + | 1425 | WP_022644937.1 | conjugal transfer protein TraB | - |
| A6P56_RS29620 () | 32067..32651 | + | 585 | WP_004161368.1 | type IV conjugative transfer system lipoprotein TraV | - |
| A6P56_RS29625 () | 32783..33193 | + | 411 | WP_004152499.1 | hypothetical protein | - |
| A6P56_RS29630 () | 33299..33517 | + | 219 | WP_004152501.1 | hypothetical protein | - |
| A6P56_RS29635 () | 33518..33829 | + | 312 | WP_004152502.1 | hypothetical protein | - |
| A6P56_RS29640 () | 33896..34300 | + | 405 | WP_004152503.1 | hypothetical protein | - |
| A6P56_RS34420 () | 34343..34732 | + | 390 | WP_004153076.1 | hypothetical protein | - |
| A6P56_RS29650 () | 34740..35138 | + | 399 | WP_011977783.1 | hypothetical protein | - |
| A6P56_RS29655 () | 35210..37849 | + | 2640 | WP_022644936.1 | type IV secretion system protein TraC | - |
| A6P56_RS29660 () | 37849..38241 | + | 393 | WP_022644935.1 | type-F conjugative transfer system protein TrbI | - |
| A6P56_RS29665 () | 38238..38873 | + | 636 | WP_020325113.1 | type-F conjugative transfer system protein TraW | - |
| A6P56_RS29670 () | 38908..39309 | + | 402 | WP_022644934.1 | hypothetical protein | - |
| A6P56_RS29675 () | 39306..40295 | + | 990 | WP_015632509.1 | conjugal transfer pilus assembly protein TraU | - |
| A6P56_RS29680 () | 40308..40946 | + | 639 | WP_022644933.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| A6P56_RS29685 () | 41005..42960 | + | 1956 | WP_022644932.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| A6P56_RS29690 () | 42992..43246 | + | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| A6P56_RS29695 () | 43224..43472 | + | 249 | WP_022644931.1 | hypothetical protein | - |
| A6P56_RS29700 () | 43485..43811 | + | 327 | WP_004152676.1 | hypothetical protein | - |
| A6P56_RS29705 () | 43832..44584 | + | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| A6P56_RS29710 () | 44595..44834 | + | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| A6P56_RS29715 () | 44806..45363 | + | 558 | WP_022644930.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| A6P56_RS29720 () | 45409..45852 | + | 444 | WP_004194305.1 | F-type conjugal transfer protein TrbF | - |
| A6P56_RS29725 () | 45830..47209 | + | 1380 | WP_075995129.1 | F-type conjugal transfer protein TraH | - |
| A6P56_RS29730 () | 47209..50058 | + | 2850 | WP_004152624.1 | conjugal transfer mating pair stabilization protein TraG | - |
| A6P56_RS29735 () | 50071..50619 | + | 549 | WP_004152623.1 | conjugal transfer entry exclusion protein TraS | - |
| A6P56_RS29740 () | 50803..51534 | + | 732 | WP_004152622.1 | complement resistance protein TraT | - |
| A6P56_RS34160 () | 51726..52415 | + | 690 | WP_022644928.1 | hypothetical protein | - |
| A6P56_RS29750 () | 52544..54856 | + | 2313 | Protein_69 | type IV conjugative transfer system coupling protein TraD | - |
| A6P56_RS29755 () | 54856..60117 | + | 5262 | WP_022644926.1 | Multifunctional conjugation protein TraI | Relaxase |
| A6P56_RS29760 () | 60198..60923 | + | 726 | WP_032072081.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| A6P56_RS29765 () | 61080..61673 | + | 594 | WP_022644924.1 | fertility inhibition protein FinO | - |
| A6P56_RS32805 () | 61834..62436 | + | 603 | WP_072216873.1 | hypothetical protein | - |
| A6P56_RS29775 () | 62486..63109 | + | 624 | WP_022644923.1 | hypothetical protein | - |
| A6P56_RS29780 () | 63115..63765 | + | 651 | WP_022644922.1 | DUF2726 domain-containing protein | - |
| A6P56_RS29790 () | 64219..64725 | + | 507 | WP_072216876.1 | Phospholipase D | VF |
| A6P56_RS29795 () | 64857..65114 | + | 258 | WP_022644919.1 | replication regulatory protein RepA | - |
| A6P56_RS29805 () | 65357..65434 | + | 78 | WP_011201829.1 | RepA leader peptide Tap | - |
| A6P56_RS29810 () | 65427..66446 | + | 1020 | WP_032408924.1 | replication initiation protein | - |
| A6P56_RS29820 () | 67462..68367 | + | 906 | WP_022644917.1 | hypothetical protein | - |
| A6P56_RS29830 () | 68736..69317 | + | 582 | WP_032408940.1 | DUF2913 family protein | - |
| A6P56_RS29835 () | 69357..70310 | - | 954 | WP_022644915.1 | Recombination-promoting nuclease RpnA | VF |
| A6P56_RS29840 () | 70418..71005 | - | 588 | WP_022644914.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| A6P56_RS29850 () | 71545..72063 | + | 519 | WP_022644913.1 | hypothetical protein | - |
| A6P56_RS29855 () | 72385..73032 | + | 648 | WP_022644912.1 | AAA family ATPase | - |
| A6P56_RS29860 () | 73023..73298 | + | 276 | WP_032072061.1 | hypothetical protein | - |
| A6P56_RS29865 () | 73499..73699 | - | 201 | WP_022644911.1 | hypothetical protein | - |
| A6P56_RS29870 () | 73801..75072 | - | 1272 | WP_022644910.1 | Y-family DNA polymerase | - |
| A6P56_RS29875 () | 75084..75533 | - | 450 | WP_044596206.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| A6P56_RS29880 () | 75530..75775 | - | 246 | WP_022644908.1 | DinI-like family protein | - |
| A6P56_RS29885 () | 75979..76209 | + | 231 | WP_022644907.1 | hypothetical protein | - |
| A6P56_RS29895 () | 76645..77577 | + | 933 | WP_022644906.1 | DUF1281 domain-containing protein | - |
| A6P56_RS29900 () | 77612..77845 | + | 234 | WP_004194746.1 | hypothetical protein | - |
| A6P56_RS29905 () | 77842..78177 | + | 336 | WP_022644905.1 | hypothetical protein | - |
| A6P56_RS34425 () | 78221..78491 | + | 271 | Protein_95 | hypothetical protein | - |
| A6P56_RS29910 () | 78563..79264 | + | 702 | WP_004152355.1 | DNA methylase | - |
| A6P56_RS29915 () | 79264..79485 | + | 222 | WP_022644904.1 | hypothetical protein | - |
| A6P56_RS29920 () | 79495..79914 | + | 420 | WP_022644903.1 | DUF1380 domain-containing protein | - |
| A6P56_RS29925 () | 79968..80735 | + | 768 | WP_032072058.1 | hypothetical protein | - |
| A6P56_RS34430 () | 81416..81844 | + | 429 | WP_022644901.1 | antirestriction protein | - |
| A6P56_RS29940 () | 81889..82395 | + | 507 | WP_022644900.1 | antirestriction protein ArdA | - |
| A6P56_RS29945 () | 82438..82629 | + | 192 | WP_022644899.1 | hypothetical protein | - |
| A6P56_RS29950 () | 82823..83077 | + | 255 | WP_025404029.1 | DNA polymerase III subunit theta | - |
| A6P56_RS29955 () | 83113..83433 | + | 321 | WP_022644897.1 | hypothetical protein | - |
| A6P56_RS29970 () | 84108..84650 | + | 543 | WP_022644896.1 | single-stranded DNA-binding protein | - |
| A6P56_RS29975 () | 84699..84947 | + | 249 | WP_022644895.1 | DUF905 domain-containing protein | - |
| A6P56_RS29980 () | 85016..87016 | + | 2001 | WP_022644894.1 | ParB/RepB/Spo0J family partition protein | - |
| A6P56_RS29985 () | 87061..87492 | + | 432 | WP_015632482.1 | conjugation system SOS inhibitor PsiB | - |
| A6P56_RS29990 () | 87489..88217 | + | 729 | WP_022644893.1 | plasmid SOS inhibition protein A | - |
| A6P56_RS29995 () | 88214..88540 | + | 327 | WP_015632484.1 | hypothetical protein | - |
| A6P56_RS32085 () | 88729..90104 | + | 1376 | WP_087439983.1 | IS3 family transposase | - |
| A6P56_RS30015 () | 90274..91314 | + | 1041 | WP_022644891.1 | ATP-binding protein | - |
| A6P56_RS30020 () | 91520..93802 | + | 2283 | WP_162859354.1 | S8 family peptidase | - |
| A6P56_RS30025 () | 94236..95768 | - | 1533 | WP_015065592.1 | IS3 family transposase ISKpn38 | Transposase |
| A6P56_RS30030 () | 95857..97197 | + | 1341 | WP_004196353.1 | ISNCY family transposase ISCARN112 | Transposase |
| A6P56_RS30035 () | 97453..97875 | - | 423 | WP_032072095.1 | nickel resistance OB fold protein NcrY | - |
| A6P56_RS30040 () | 98037..99167 | - | 1131 | WP_004196366.1 | Ni(II)/Co(II) efflux transporter permease subunit NcrC | - |
| A6P56_RS30045 () | 99180..99449 | - | 270 | WP_004196355.1 | nickel-sensing transcriptional repressor NcrB | - |
| A6P56_RS30050 () | 99555..100853 | - | 1299 | WP_004196314.1 | nickel resistance membrane nickel efflux protein NirA | - |
| A6P56_RS30055 () | 101087..101845 | - | 759 | WP_004196325.1 | hypothetical protein | - |
| A6P56_RS30060 () | 101899..102819 | - | 921 | WP_004196315.1 | hypothetical protein | - |
| A6P56_RS30065 () | 102882..103253 | - | 372 | WP_004196359.1 | hypothetical protein | - |
| A6P56_RS32825 () | 103378..103570 | - | 193 | Protein_123 | MFS transporter | - |
| A6P56_RS30070 () | 103654..103809 | + | 156 | Protein_124 | chromate resistance protein | - |
| A6P56_RS30075 () | 104165..105484 | + | 1320 | WP_004152397.1 | IS1182 family transposase ISKpn6 | Transposase |
| A6P56_RS30080 () | 105734..106615 | - | 882 | WP_004152396.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| A6P56_RS30095 () | 106934..107713 | - | 780 | WP_004152394.1 | IS21 family transposase ISKpn7 | Transposase |
| A6P56_RS30100 () | 107710..108735 | - | 1026 | WP_004199214.1 | IS21 family transposase ISKpn7 | Transposase |
| A6P56_RS30105 () | 108842..111871 | - | 3030 | WP_004152392.1 | Tn3 family transposase ISPsy42 | Transposase |
| A6P56_RS30110 () | 111981..113696 | + | 1716 | WP_004152391.1 | Tn3-like element Tn4401 family resolvase TnpR | - |
| A6P56_RS30115 () | 113748..114647 | - | 900 | Protein_131 | Tn3 family transposase TnpA_Tn3 | Transposase |
| A6P56_RS30120 () | 114811..115368 | + | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| A6P56_RS30125 () | 115602..116156 | + | 555 | WP_014454105.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| A6P56_RS30130 () | 116226..117014 | + | 789 | WP_001206315.1 | Streptomycin 3''-adenylyltransferase | ARG |
| A6P56_RS30135 () | 117074..117898 | + | 825 | WP_000722315.1 | Beta-lactamase OXA-18 | ARG |
| A6P56_RS30140 () | 118098..118415 | + | 318 | Protein_136 | recombinase family protein | - |
| A6P56_RS30145 () | 118598..119458 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| A6P56_RS30150 () | 119668..120072 | + | 405 | Protein_138 | IS91 family transposase ISPps1 | Transposase |
| A6P56_RS30160 () | 120179..121015 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| A6P56_RS30165 () | 121015..121818 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| A6P56_RS30170 () | 121879..122694 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| A6P56_RS30180 () | 123024..123200 | + | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| A6P56_RS30185 () | 123382..124386 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| A6P56_RS30190 () | 124465..126231 | - | 1767 | Protein_144 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| A6P56_RS30200 () | 126283..126987 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| A6P56_RS30205 () | 127023..127328 | + | 306 | WP_025404032.1 | IncN plasmid KikA protein | - |
| A6P56_RS30210 () | 127364..127675 | + | 312 | WP_001452736.1 | hypothetical protein | - |
| A6P56_RS30215 () | 127884..128372 | + | 489 | WP_064577928.1 | restriction endonuclease | - |
| A6P56_RS30220 () | 128377..128583 | + | 207 | WP_001749967.1 | hypothetical protein | - |
| A6P56_RS30225 () | 128594..128866 | - | 273 | Protein_150 | IS1 family transposase IS1X2 | Transposase |
| A6P56_RS30230 () | 128995..130398 | + | 1404 | WP_072094655.1 | DNA cytosine methyltransferase | - |
| A6P56_RS30235 () | 130432..131646 | - | 1215 | WP_004098817.1 | type II site-specific deoxyribonuclease | - |
| A6P56_RS34190 () | 131702..131767 | + | 66 | Protein_153 | EAL domain-containing protein | - |
| A6P56_RS30245 () | 131907..132671 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| A6P56_RS30260 () | 132814..133080 | - | 267 | WP_001144737.1 | hypothetical protein | Relaxase |
| A6P56_RS30265 () | 133301..133774 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| A6P56_RS30270 () | 133930..134697 | + | 768 | Protein_157 | IS91 family transposase ISAzo26 | Transposase |
| A6P56_RS30275 () | 134750..135454 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| A6P56_RS30280 () | 135501..135737 | - | 237 | WP_001348075.1 | AAA family ATPase | - |
| A6P56_RS30285 () | 135811..136227 | - | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| A6P56_RS30290 () | 136224..136454 | - | 231 | WP_001261282.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| A6P56_RS30295 () | 136411..136871 | + | 461 | Protein_162 | hypothetical protein | - |
| A6P56_RS34195 () | 136999..137319 | + | 321 | WP_032072060.1 | hypothetical protein | - |
| A6P56_RS30300 () | 137368..138006 | + | 639 | WP_022644887.1 | hypothetical protein | - |
| A6P56_RS30305 () | 138009..138794 | + | 786 | WP_022644886.1 | site-specific integrase | - |
| A6P56_RS30310 () | 138852..139109 | - | 258 | WP_032408936.1 | hypothetical protein | - |
| A6P56_RS34200 () | 139238..139351 | - | 114 | WP_032072094.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|