MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 140126 bp
Accession: NZ_CP015379 Location: 4145893..4286018 Organism: Hafnia alvei strain HUMV-5920 Replicon: chromosome
Accession: NZ_CP015379 Location: 4145893..4286018 Organism: Hafnia alvei strain HUMV-5920 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6V27_RS18800 () | 4140922..4141542 | + | 621 | WP_063587293.1 | lipoprotein insertase outer membrane protein LolB | - |
| A6V27_RS18805 () | 4141539..4142411 | + | 873 | WP_043492961.1 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase | - |
| A6V27_RS18810 () | 4142704..4143651 | + | 948 | WP_008813270.1 | ribose-phosphate diphosphokinase | - |
| A6V27_RS18815 () | 4143849..4144121 | - | 273 | WP_025801841.1 | stress-induced protein YchH | - |
| A6V27_RS18820 () | 4144436..4145026 | + | 591 | WP_025801839.1 | aminoacyl-tRNA hydrolase | - |
| A6V27_RS18825 () | 4145162..4146253 | + | 1092 | WP_025801837.1 | redox-regulated ATPase YchF | - |
| A6V27_RS18830 () | 4146669..4147619 | - | 951 | WP_063587294.1 | aminoimidazole riboside kinase | - |
| A6V27_RS21280 () | 4147646..4148070 | - | 425 | Protein_3674 | carbohydrate porin | - |
| A6V27_RS18840 () | 4148120..4149547 | - | 1428 | WP_063587296.1 | glycoside hydrolase family 32 protein | - |
| A6V27_RS18845 () | 4149568..4150809 | - | 1242 | WP_063587297.1 | MFS transporter | - |
| A6V27_RS18850 () | 4151242..4152237 | + | 996 | WP_063587298.1 | LacI family DNA-binding transcriptional regulator | - |
| A6V27_RS18855 () | 4152995..4154461 | + | 1467 | WP_063587299.1 | basic amino acid/polyamine antiporter | - |
| A6V27_RS18860 () | 4154568..4156940 | + | 2373 | WP_063587300.1 | arginine decarboxylase | - |
| A6V27_RS18865 () | 4157014..4158525 | + | 1512 | WP_071892826.1 | basic amino acid/polyamine antiporter | - |
| A6V27_RS18870 () | 4158959..4159609 | + | 651 | WP_063587301.1 | metal-binding protein ZinT | - |
| A6V27_RS18875 () | 4160320..4161569 | + | 1250 | Protein_3682 | formyl-CoA transferase | - |
| A6V27_RS18880 () | 4161639..4163333 | + | 1695 | WP_063587302.1 | oxalyl-CoA decarboxylase | - |
| A6V27_RS18885 () | 4163345..4164493 | + | 1149 | WP_063587303.1 | CoA:oxalate CoA-transferase | - |
| A6V27_RS18890 () | 4164527..4165489 | + | 963 | WP_063587304.1 | transporter YfdV | - |
| A6V27_RS18900 () | 4166479..4168016 | - | 1538 | Protein_3686 | DHA2 family efflux MFS transporter permease subunit | - |
| A6V27_RS18905 () | 4168025..4169176 | - | 1152 | WP_063587306.1 | putative multidrug resistance protein EmrK | VF |
| A6V27_RS18910 () | 4169409..4170164 | - | 756 | WP_063587307.1 | HTH-type transcriptional regulator GadW | VF |
| A6V27_RS18915 () | 4170385..4172664 | - | 2280 | WP_063587308.1 | FdhF/YdeP family oxidoreductase | - |
| A6V27_RS18920 () | 4173554..4173889 | - | 336 | WP_025801799.1 | multidrug DMT transporter | - |
| A6V27_RS18925 () | 4174124..4175392 | + | 1269 | WP_063587309.1 | MASE1 domain-containing protein | - |
| A6V27_RS18930 () | 4175431..4176750 | + | 1320 | WP_063587310.1 | hypothetical protein | - |
| A6V27_RS18935 () | 4176947..4177996 | - | 1050 | WP_040046879.1 | hypothetical protein | VF |
| A6V27_RS18940 () | 4178023..4178610 | - | 588 | WP_052439976.1 | BMC domain-containing protein | - |
| A6V27_RS18945 () | 4178617..4179945 | - | 1329 | WP_145916010.1 | SLBB domain-containing protein | - |
| A6V27_RS18950 () | 4179962..4180516 | - | 555 | WP_063587311.1 | BMC domain-containing protein | - |
| A6V27_RS18955 () | 4180529..4181188 | - | 660 | WP_040046881.1 | ethanolamine utilization microcompartment protein EutL | - |
| A6V27_RS18960 () | 4181200..4182081 | - | 882 | WP_063587312.1 | ethanolamine ammonia-lyase subunit EutC | - |
| A6V27_RS18965 () | 4182100..4183461 | - | 1362 | WP_063587313.1 | ethanolamine ammonia-lyase subunit EutB | - |
| A6V27_RS18970 () | 4183474..4184886 | - | 1413 | WP_063587314.1 | ethanolamine ammonia-lyase reactivating factor EutA | - |
| A6V27_RS18975 () | 4184888..4186135 | - | 1248 | WP_025801779.1 | ethanolamine utilization protein EutH | - |
| A6V27_RS18980 () | 4186170..4187384 | - | 1215 | WP_063587315.1 | NAD-dependent methanol dehydrogenase | VF |
| A6V27_RS18985 () | 4187377..4188219 | - | 843 | WP_063587316.1 | ethanolamine utilization protein EutJ | - |
| A6V27_RS18990 () | 4188231..4189658 | - | 1428 | WP_063587317.1 | Aldehyde-alcohol dehydrogenase | VF |
| A6V27_RS18995 () | 4189853..4190140 | - | 288 | WP_025801770.1 | ethanolamine utilization microcompartment protein EutN | - |
| A6V27_RS19000 () | 4190277..4190570 | - | 294 | WP_005189879.1 | ethanolamine utilization microcompartment protein EutM | - |
| A6V27_RS19005 () | 4190735..4191697 | - | 963 | Protein_3707 | phosphate acetyltransferase | - |
| A6V27_RS19010 () | 4191687..4192541 | - | 855 | WP_063587319.1 | ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT | - |
| A6V27_RS19015 () | 4192579..4193328 | - | 750 | WP_063587320.1 | ethanolamine utilization acetate kinase EutQ | - |
| A6V27_RS19020 () | 4193328..4193789 | - | 462 | WP_046457771.1 | EutP/PduV family microcompartment system protein | - |
| A6V27_RS19025 () | 4193792..4194127 | - | 336 | WP_025801761.1 | ethanolamine utilization microcompartment protein EutS | - |
| A6V27_RS19030 () | 4194523..4195863 | + | 1341 | WP_063587321.1 | AppA family phytase/histidine-type acid phosphatase | - |
| A6V27_RS19035 () | 4196096..4196464 | + | 369 | WP_063587322.1 | CHAP domain-containing protein | - |
| A6V27_RS19040 () | 4196464..4196964 | + | 501 | WP_063587323.1 | YbjP/YqhG family protein | - |
| A6V27_RS19045 () | 4197028..4197663 | - | 636 | WP_063587324.1 | Transcriptional regulatory protein RcsB | VF |
| A6V27_RS19050 () | 4197808..4198320 | - | 513 | WP_040046893.1 | hypothetical protein | - |
| A6V27_RS19055 () | 4198333..4199226 | - | 894 | WP_063587325.1 | hypothetical protein | - |
| A6V27_RS19060 () | 4199230..4199943 | - | 714 | WP_040046895.1 | hypothetical protein | - |
| A6V27_RS19065 () | 4199930..4202494 | - | 2565 | WP_063587326.1 | TcfC E-set like domain-containing protein | - |
| A6V27_RS19070 () | 4202511..4203026 | - | 516 | WP_063587327.1 | hypothetical protein | - |
| A6V27_RS19075 () | 4203080..4203622 | - | 543 | WP_025801741.1 | hypothetical protein | - |
| A6V27_RS19080 () | 4203980..4205230 | - | 1251 | WP_063587328.1 | protein TadG, associated with Flp pilus assembly | - |
| A6V27_RS19085 () | 4205206..4205577 | - | 372 | WP_043492874.1 | hypothetical protein | - |
| A6V27_RS19090 () | 4205578..4206165 | - | 588 | WP_081250316.1 | flp pilus assembly surface protein TadF | - |
| A6V27_RS19095 () | 4206128..4206619 | - | 492 | WP_038502153.1 | pilus assembly protein | - |
| A6V27_RS19100 () | 4206619..4207356 | - | 738 | WP_063587329.1 | tetratricopeptide repeat protein | - |
| A6V27_RS19105 () | 4207343..4208182 | - | 840 | WP_063587330.1 | type II secretion system F family protein | - |
| A6V27_RS19110 () | 4208182..4209054 | - | 873 | WP_063587331.1 | type II secretion system F family protein | - |
| A6V27_RS19115 () | 4209058..4210338 | - | 1281 | WP_040046905.1 | Putative conjugal transfer protein | VF |
| A6V27_RS19120 () | 4210339..4211466 | - | 1128 | WP_063587332.1 | hypothetical protein | - |
| A6V27_RS19125 () | 4211479..4211907 | - | 429 | Protein_3731 | hypothetical protein | - |
| A6V27_RS19130 () | 4211970..4213379 | - | 1410 | WP_063587334.1 | pilus assembly protein N-terminal domain-containing protein | - |
| A6V27_RS19135 () | 4213376..4214185 | - | 810 | WP_063587335.1 | hypothetical protein | - |
| A6V27_RS19140 () | 4214217..4214654 | - | 438 | WP_063587336.1 | prepilin peptidase | - |
| A6V27_RS19145 () | 4214808..4215044 | - | 237 | WP_025801724.1 | Flp family type IVb pilin | - |
| A6V27_RS19150 () | 4215218..4215808 | - | 591 | WP_063587337.1 | hypothetical protein | VF |
| A6V27_RS19155 () | 4216421..4217734 | - | 1314 | WP_063587338.1 | serine hydrolase | - |
| A6V27_RS19160 () | 4217924..4219576 | - | 1653 | WP_063587339.1 | malate dehydrogenase (quinone) | - |
| A6V27_RS19165 () | 4220033..4220884 | + | 852 | WP_063587340.1 | aldo/keto reductase | - |
| A6V27_RS19170 () | 4220950..4221939 | + | 990 | WP_063587341.1 | aldo/keto reductase | - |
| A6V27_RS19175 () | 4222102..4222536 | + | 435 | WP_063587342.1 | hypothetical protein | - |
| A6V27_RS19180 () | 4222640..4223653 | - | 1014 | WP_040046916.1 | magnesium transporter | - |
| A6V27_RS19185 () | 4224096..4224668 | - | 573 | WP_063587343.1 | TetR/AcrR family transcriptional regulator | - |
| A6V27_RS19190 () | 4224788..4226254 | + | 1467 | WP_063587644.1 | MFS transporter | - |
| A6V27_RS19195 () | 4226277..4226798 | + | 522 | WP_063587344.1 | VTT domain-containing protein | - |
| A6V27_RS19200 () | 4226888..4227235 | + | 348 | WP_063587345.1 | nitrous oxide-stimulated promoter family protein | - |
| A6V27_RS19205 () | 4227536..4229689 | + | 2154 | WP_063587346.1 | Colicin I receptor | VF |
| A6V27_RS19210 () | 4229692..4230528 | + | 837 | WP_040046955.1 | Hemin-binding periplasmic protein HmuT | VF |
| A6V27_RS19215 () | 4230574..4231071 | + | 498 | WP_040046920.1 | hypothetical protein | VF |
| A6V27_RS19220 () | 4231189..4232163 | + | 975 | WP_145916012.1 | Hemin transport system permease protein HmuU | VF |
| A6V27_RS19225 () | 4232211..4232783 | - | 573 | WP_040046922.1 | DedA family protein | - |
| A6V27_RS19230 () | 4233075..4234184 | + | 1110 | WP_040046923.1 | sodium-potassium/proton antiporter ChaA | - |
| A6V27_RS19235 () | 4234369..4234653 | + | 285 | WP_040046924.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| A6V27_RS19240 () | 4234644..4235126 | + | 483 | WP_040046925.1 | GNAT family N-acetyltransferase | Toxin Detail |
| A6V27_RS19245 () | 4235147..4235989 | - | 843 | WP_063587348.1 | DMT family transporter | - |
| A6V27_RS19250 () | 4236142..4236930 | - | 789 | WP_025801705.1 | phosphate starvation-inducible protein PhoH | - |
| A6V27_RS19255 () | 4237454..4237888 | + | 435 | WP_025801704.1 | Rrf2 family transcriptional regulator | - |
| A6V27_RS19260 () | 4237978..4238622 | - | 645 | WP_025801703.1 | Protein phosphatase CheZ | VF |
| A6V27_RS19265 () | 4238632..4239021 | - | 390 | WP_025801702.1 | Chemotaxis protein CheY | VF |
| A6V27_RS19270 () | 4239057..4240109 | - | 1053 | WP_025801701.1 | Chemotaxis response regulator protein-glutamate methylesterase | VF |
| A6V27_RS19275 () | 4240106..4240981 | - | 876 | WP_025801700.1 | Chemotaxis protein methyltransferase | VF |
| A6V27_RS19280 () | 4241049..4242680 | - | 1632 | WP_063587645.1 | Methyl-accepting chemotaxis protein IV | VF |
| A6V27_RS19285 () | 4242934..4244598 | - | 1665 | WP_063587349.1 | Methyl-accepting chemotaxis protein I | VF |
| A6V27_RS19290 () | 4244840..4245334 | - | 495 | WP_040046929.1 | Chemotaxis protein CheW | VF |
| A6V27_RS19295 () | 4245412..4247451 | - | 2040 | WP_063587350.1 | Chemotaxis protein CheA | VF |
| A6V27_RS19300 () | 4247461..4248449 | - | 989 | Protein_3766 | Motility protein B | VF |
| A6V27_RS19305 () | 4248446..4249339 | - | 894 | WP_040046931.1 | Motility protein A | VF |
| A6V27_RS19310 () | 4249523..4250104 | - | 582 | WP_025801693.1 | Flagellar transcriptional regulator FlhC | VF |
| A6V27_RS19315 () | 4250107..4250457 | - | 351 | WP_025801692.1 | Flagellar transcriptional regulator FlhD | VF |
| A6V27_RS19320 () | 4251568..4251987 | + | 420 | WP_040046933.1 | universal stress protein | - |
| A6V27_RS19325 () | 4252148..4252378 | + | 231 | WP_046360852.1 | (4Fe-4S)-binding protein | - |
| A6V27_RS19330 () | 4252389..4252661 | + | 273 | WP_025801688.1 | N-acetyltransferase | - |
| A6V27_RS19335 () | 4252747..4253652 | + | 906 | WP_063587351.1 | Putative acetyl-hydrolase LipR | VF |
| A6V27_RS19340 () | 4253709..4254224 | - | 516 | WP_081250318.1 | DUF2501 domain-containing protein | - |
| A6V27_RS19345 () | 4254583..4256355 | + | 1773 | WP_040046936.1 | peptidoglycan glycosyltransferase FtsI | - |
| A6V27_RS19350 () | 4256719..4258326 | + | 1608 | WP_063587353.1 | phosphoethanolamine transferase | - |
| A6V27_RS19355 () | 4258838..4260202 | + | 1365 | WP_063587354.1 | GGDEF domain-containing protein | - |
| A6V27_RS19360 () | 4260210..4260914 | - | 705 | WP_063587355.1 | DUF2461 domain-containing protein | - |
| A6V27_RS19365 () | 4260989..4261561 | - | 573 | WP_063587356.1 | hydrolase | - |
| A6V27_RS19370 () | 4261836..4263020 | + | 1185 | WP_046360856.1 | multidrug efflux MFS transporter | - |
| A6V27_RS19375 () | 4263081..4264370 | - | 1290 | WP_040046942.1 | branched-chain amino acid transport system II carrier protein | - |
| A6V27_RS19380 () | 4264962..4265861 | - | 900 | WP_063587357.1 | DUF4434 domain-containing protein | - |
| A6V27_RS19385 () | 4265861..4268836 | - | 2976 | WP_063587358.1 | tetratricopeptide repeat protein | - |
| A6V27_RS19390 () | 4268833..4271055 | - | 2223 | WP_063587359.1 | phage adsorption protein NrfB | - |
| A6V27_RS19395 () | 4271579..4272460 | - | 882 | WP_063587360.1 | nickel/cobalt efflux protein RcnA | - |
| A6V27_RS19400 () | 4272580..4272852 | + | 273 | WP_040047185.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| A6V27_RS19405 () | 4272918..4273202 | - | 285 | WP_063587361.1 | GTP cyclohydrolase | - |
| A6V27_RS19410 () | 4273645..4273902 | - | 258 | WP_071892833.1 | hypothetical protein | - |
| A6V27_RS19415 () | 4274155..4275072 | + | 918 | WP_063587363.1 | M14 family metallocarboxypeptidase | - |
| A6V27_RS19420 () | 4275292..4276176 | - | 885 | WP_040047182.1 | HTH-type transcriptional regulator PgrR | VF |
| A6V27_RS19425 () | 4276349..4277476 | + | 1128 | WP_040047181.1 | alpha/beta hydrolase | - |
| A6V27_RS19430 () | 4277620..4278812 | + | 1193 | Protein_3792 | MFS transporter | - |
| A6V27_RS19445 () | 4280288..4280824 | + | 537 | WP_063587366.1 | cytochrome b | - |
| A6V27_RS21285 () | 4281376..4281575 | + | 200 | Protein_3794 | integrase | - |
| A6V27_RS19455 () | 4281854..4282345 | - | 492 | WP_063587368.1 | hypothetical protein | - |
| A6V27_RS19460 () | 4282338..4283348 | - | 1011 | WP_063587369.1 | IS91 family transposase ISWz1 | Transposase |
| A6V27_RS19465 () | 4283410..4283979 | - | 570 | WP_081250320.1 | helix-turn-helix domain containing protein | - |
| A6V27_RS19470 () | 4284095..4284307 | + | 213 | WP_063587370.1 | hypothetical protein | - |
| A6V27_RS19475 () | 4284410..4284919 | + | 510 | WP_063587371.1 | hypothetical protein | - |
| A6V27_RS19480 () | 4284988..4285215 | + | 228 | WP_063587372.1 | DUF2732 family protein | - |
| A6V27_RS19485 () | 4285215..4285433 | + | 219 | WP_063587373.1 | TraR/DksA family transcriptional regulator | - |
| A6V27_RS19490 () | 4285430..4287727 | + | 2298 | WP_063587374.1 | replication endonuclease | - |
| A6V27_RS19495 () | 4287829..4288014 | + | 186 | WP_061553748.1 | hypothetical protein | - |
| A6V27_RS19500 () | 4288342..4288815 | + | 474 | WP_081250321.1 | head completion/stabilization protein | - |
| A6V27_RS19505 () | 4288815..4289018 | + | 204 | WP_063587375.1 | tail protein X | - |
| A6V27_RS19510 () | 4289009..4289230 | + | 222 | WP_061553745.1 | phage holin family protein | - |
| A6V27_RS19515 () | 4289214..4289723 | + | 510 | WP_063587376.1 | lysozyme | - |
| A6V27_RS19520 () | 4289720..4290151 | + | 432 | WP_063587377.1 | Rz-like lysis system protein LysB | - |
| A6V27_RS19525 () | 4290241..4290708 | + | 468 | WP_063587378.1 | phage tail protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|