MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 29016 bp
Accession: NZ_CP015374 Location: 1..29016 Organism: Pandoraea pnomenusa strain MCB032 Replicon: plasmid unnamed 3
Accession: NZ_CP015374 Location: 1..29016 Organism: Pandoraea pnomenusa strain MCB032 Replicon: plasmid unnamed 3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6P55_RS26755 () | 44..932 | + | 889 | Protein_1 | replication initiator protein A | - |
| A6P55_RS25865 () | 1178..4086 | - | 2909 | Protein_2 | Tn3 family transposase TnpA_IS1071 | Transposase |
| A6P55_RS27250 () | 5704..5862 | - | 159 | WP_102906387.1 | hypothetical protein | - |
| A6P55_RS25870 () | 5859..6161 | - | 303 | WP_063599770.1 | hypothetical protein | - |
| A6P55_RS25875 () | 6165..7241 | - | 1077 | WP_063599771.1 | Type IV secretion system protein VirB6 | VF |
| A6P55_RS25880 () | 7243..7503 | - | 261 | WP_063599772.1 | EexN family lipoprotein | - |
| A6P55_RS25885 () | 7500..7997 | - | 498 | WP_063599773.1 | hypothetical protein | - |
| A6P55_RS25890 () | 8009..8734 | - | 726 | WP_063599774.1 | Type IV secretion system protein virB5 | VF |
| A6P55_RS25895 () | 9281..10531 | - | 1251 | WP_102906391.1 | type IV secretion system DNA-binding domain-containing protein | - |
| A6P55_RS25910 () | 11452..12159 | - | 708 | WP_063599778.1 | hypothetical protein | - |
| A6P55_RS25915 () | 12165..12593 | - | 429 | WP_146039731.1 | hypothetical protein | - |
| A6P55_RS25920 () | 13023..13385 | + | 363 | WP_014125923.1 | hypothetical protein | Relaxase |
| A6P55_RS25925 () | 13375..15759 | + | 2385 | WP_146041349.1 | hypothetical protein | - |
| A6P55_RS25930 () | 15918..16547 | + | 630 | WP_033455146.1 | AAA family ATPase | - |
| A6P55_RS25935 () | 16560..16775 | + | 216 | WP_014125926.1 | chromosome partitioning protein ParB | - |
| A6P55_RS25940 () | 16792..17490 | + | 699 | WP_063599781.1 | hypothetical protein | - |
| A6P55_RS26760 () | 17503..17694 | + | 192 | WP_081043765.1 | antitoxin VbhA family protein | - |
| A6P55_RS25945 () | 17711..18481 | - | 771 | WP_081256097.1 | hypothetical protein | - |
| A6P55_RS25950 () | 18612..19843 | - | 1232 | Protein_19 | DNA cytosine methyltransferase | - |
| A6P55_RS25955 () | 20149..20780 | - | 632 | Protein_20 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| A6P55_RS25960 () | 20922..21305 | - | 384 | WP_031943200.1 | hypothetical protein | - |
| A6P55_RS25965 () | 21302..21864 | - | 563 | Protein_22 | Tn3 family transposase ISPsy42 | Transposase |
| A6P55_RS25970 () | 22079..22360 | - | 282 | WP_060986098.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| A6P55_RS25975 () | 22347..22616 | - | 270 | WP_060986097.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| A6P55_RS25980 () | 22929..23396 | + | 468 | WP_063599784.1 | hypothetical protein | - |
| A6P55_RS25985 () | 23471..23755 | + | 285 | WP_063599785.1 | hypothetical protein | - |
| A6P55_RS25990 () | 23759..24067 | + | 309 | WP_063599782.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| A6P55_RS25995 () | 24158..24532 | + | 375 | WP_014125932.1 | hypothetical protein | - |
| A6P55_RS26000 () | 24637..24891 | + | 255 | WP_146039733.1 | hypothetical protein | - |
| A6P55_RS26005 () | 24888..26096 | + | 1209 | WP_081256098.1 | replication initiator protein A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|