MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 69245 bp
Accession: NZ_CP015342 Location: 2297781..2367025 Organism: Legionella pneumophila strain D-7632 Replicon: chromosome
Accession: NZ_CP015342 Location: 2297781..2367025 Organism: Legionella pneumophila strain D-7632 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A5478_RS10265 () | 2293007..2294044 | - | 1038 | WP_014844318.1 | lpg2050 family Dot/Icm T4SS effector | - |
| A5478_RS10270 () | 2294212..2295240 | + | 1029 | WP_014844319.1 | type 2 isopentenyl-diphosphate Delta-isomerase | - |
| A5478_RS10275 () | 2295231..2296529 | + | 1299 | WP_014844320.1 | hydroxymethylglutaryl-CoA reductase, degradative | - |
| A5478_RS10280 () | 2296526..2297404 | + | 879 | WP_027224831.1 | hypothetical protein | - |
| A5478_RS10300 () | 2297897..2298901 | - | 1005 | WP_010947770.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| A5478_RS10305 () | 2298814..2299116 | - | 303 | WP_010947771.1 | helix-turn-helix domain-containing protein | - |
| A5478_RS10315 () | 2299526..2300149 | + | 624 | WP_010947772.1 | helix-turn-helix domain-containing protein | - |
| A5478_RS10320 () | 2300146..2300352 | - | 207 | WP_021436844.1 | hypothetical protein | - |
| A5478_RS10325 () | 2300513..2301820 | + | 1308 | WP_010947773.1 | hypothetical protein | - |
| A5478_RS10330 () | 2301803..2303008 | - | 1206 | WP_010947774.1 | MFS transporter | - |
| A5478_RS10335 () | 2303052..2303822 | - | 771 | WP_010947775.1 | methylase | - |
| A5478_RS10340 () | 2303831..2304049 | - | 219 | WP_015444251.1 | hypothetical protein | - |
| A5478_RS10345 () | 2304333..2306099 | + | 1767 | WP_010947776.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| A5478_RS10350 () | 2306096..2307904 | + | 1809 | WP_010947777.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| A5478_RS10355 () | 2307986..2308828 | + | 843 | WP_010947778.1 | aldo/keto reductase | - |
| A5478_RS10360 () | 2308839..2309339 | + | 501 | WP_010947779.1 | GNAT family N-acetyltransferase | - |
| A5478_RS10365 () | 2309362..2310144 | + | 783 | WP_010947780.1 | NYN domain-containing protein | - |
| A5478_RS10370 () | 2310159..2310536 | + | 378 | WP_010947781.1 | nucleoside triphosphate pyrophosphohydrolase | - |
| A5478_RS10375 () | 2310842..2312293 | + | 1452 | WP_010947782.1 | IS4 family transposase ISLpn5 | Transposase |
| A5478_RS10380 () | 2312364..2313884 | - | 1521 | WP_010947783.1 | group II intron reverse transcriptase/maturase | - |
| A5478_RS10385 () | 2314732..2315106 | + | 375 | WP_010947785.1 | hypothetical protein | - |
| A5478_RS10390 () | 2315304..2316911 | - | 1608 | WP_010947786.1 | hypothetical protein | - |
| A5478_RS10395 () | 2316914..2317405 | - | 492 | WP_015444248.1 | hypothetical protein | - |
| A5478_RS10400 () | 2317416..2318252 | - | 837 | WP_010947788.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| A5478_RS10405 () | 2318845..2319936 | - | 1092 | WP_010947789.1 | DUF4917 family protein | - |
| A5478_RS10410 () | 2320168..2326113 | - | 5946 | WP_010947790.1 | conjugative transfer relaxase/helicase TraI | - |
| A5478_RS10415 () | 2326134..2328026 | - | 1893 | WP_010947791.1 | type IV conjugative transfer system coupling protein TraD | - |
| A5478_RS15845 () | 2328091..2328555 | + | 465 | WP_021437030.1 | hypothetical protein | - |
| A5478_RS10425 () | 2328559..2331279 | - | 2721 | WP_015444244.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| A5478_RS10430 () | 2331285..2332670 | - | 1386 | WP_010947793.1 | conjugal transfer protein TraH | - |
| A5478_RS10435 () | 2332667..2333089 | - | 423 | WP_010947794.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| A5478_RS10440 () | 2333079..2333861 | - | 783 | WP_010947795.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| A5478_RS10445 () | 2333854..2335665 | - | 1812 | WP_010947796.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| A5478_RS10450 () | 2335665..2336333 | - | 669 | WP_015444243.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| A5478_RS10455 () | 2336349..2337344 | - | 996 | WP_010947798.1 | TraU family protein | - |
| A5478_RS10460 () | 2337341..2337949 | - | 609 | WP_010947799.1 | type-F conjugative transfer system protein TraW | - |
| A5478_RS10465 () | 2337946..2338281 | - | 336 | WP_015444242.1 | TrbI F-type domain-containing protein | - |
| A5478_RS10470 () | 2338274..2340826 | - | 2553 | WP_015444241.1 | type IV secretion system protein TraC | - |
| A5478_RS10475 () | 2340838..2341188 | - | 351 | WP_010947801.1 | type IV conjugative transfer system lipoprotein TraV | - |
| A5478_RS10480 () | 2341202..2342488 | - | 1287 | WP_015444240.1 | TraB/VirB10 family protein | - |
| A5478_RS10485 () | 2342490..2343203 | - | 714 | WP_010947803.1 | type-F conjugative transfer system secretin TraK | - |
| A5478_RS10490 () | 2343206..2343769 | - | 564 | WP_010947804.1 | type IV conjugative transfer system protein TraE | - |
| A5478_RS10495 () | 2343773..2344066 | - | 294 | WP_010947805.1 | type IV conjugative transfer system protein TraL | - |
| A5478_RS10500 () | 2344068..2344370 | - | 303 | WP_010947806.1 | fimbrial protein | - |
| A5478_RS10505 () | 2344385..2344621 | - | 237 | WP_010947807.1 | carbon storage regulator CsrA | - |
| A5478_RS10510 () | 2344635..2345012 | - | 378 | WP_025520140.1 | hypothetical protein | - |
| A5478_RS10515 () | 2344960..2345844 | - | 885 | WP_010947808.1 | hypothetical protein | - |
| A5478_RS10520 () | 2346017..2346697 | + | 681 | WP_015444237.1 | helix-turn-helix domain-containing protein | - |
| A5478_RS10525 () | 2346846..2347520 | + | 675 | WP_016356978.1 | IS701 family transposase ISAeme11 | Transposase |
| A5478_RS10530 () | 2347969..2348541 | + | 573 | WP_010947811.1 | Peptide methionine sulfoxide reductase MsrA | VF |
| A5478_RS10535 () | 2348525..2349022 | + | 498 | WP_015444236.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| A5478_RS10540 () | 2349015..2349602 | - | 588 | WP_010947813.1 | CDP-alcohol phosphatidyltransferase family protein | - |
| A5478_RS10545 () | 2349607..2351742 | - | 2136 | WP_010947814.1 | bifunctional TVP38/TMEM64 family protein/FAD-dependent oxidoreductase | - |
| A5478_RS10550 () | 2351761..2352642 | - | 882 | WP_010947815.1 | sterol desaturase family protein | - |
| A5478_RS15595 () | 2352749..2352895 | - | 147 | WP_010947816.1 | hypothetical protein | - |
| A5478_RS15600 () | 2353087..2353263 | + | 177 | WP_010947817.1 | MAPEG family protein | - |
| A5478_RS10555 () | 2353433..2353930 | - | 498 | WP_010947818.1 | DoxX family protein | - |
| A5478_RS10560 () | 2353920..2354699 | - | 780 | WP_010947819.1 | DNA-binding domain-containing protein | - |
| A5478_RS10565 () | 2354692..2355546 | - | 855 | WP_010947820.1 | DUF692 domain-containing protein | - |
| A5478_RS10570 () | 2355561..2355854 | - | 294 | WP_010947821.1 | DUF2282 domain-containing protein | - |
| A5478_RS10575 () | 2356044..2356565 | - | 522 | WP_010947822.1 | hypothetical protein | - |
| A5478_RS10580 () | 2356870..2357328 | - | 459 | WP_015444234.1 | hypothetical protein | - |
| A5478_RS10585 () | 2357902..2358129 | - | 228 | WP_015444232.1 | hypothetical protein | - |
| A5478_RS10590 () | 2358287..2358808 | - | 522 | WP_010947824.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| A5478_RS10595 () | 2358980..2359534 | + | 555 | WP_060871595.1 | carboxymuconolactone decarboxylase family protein | - |
| A5478_RS10600 () | 2359968..2360168 | + | 201 | WP_010947826.1 | ATP-dependent DNA helicase | - |
| A5478_RS10605 () | 2360262..2360645 | + | 384 | WP_010947827.1 | IS5 family transposase ISAli17 | Transposase |
| A5478_RS10610 () | 2360699..2361652 | - | 954 | WP_010947828.1 | Abi family protein | - |
| A5478_RS10615 () | 2362143..2363318 | - | 1176 | WP_027224832.1 | ISL3 family transposase ISLpn11 | Transposase |
| A5478_RS10620 () | 2363357..2364487 | - | 1131 | WP_064319116.1 | ISL3 family transposase ISLpn11 | Transposase |
| A5478_RS10625 () | 2364642..2365220 | + | 579 | WP_027224833.1 | hypothetical protein | - |
| A5478_RS10630 () | 2365325..2365891 | + | 567 | WP_027224834.1 | hypothetical protein | - |
| A5478_RS10635 () | 2366239..2366493 | + | 255 | WP_027224835.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| A5478_RS10640 () | 2366483..2366779 | + | 297 | WP_014844324.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A5478_RS10650 () | 2367240..2368254 | - | 1015 | Protein_2086 | transposase | - |
| A5478_RS10655 () | 2368517..2368726 | + | 210 | WP_010947832.1 | cold-shock protein | - |
| A5478_RS10660 () | 2368966..2370372 | + | 1407 | WP_014844326.1 | ATP-dependent RNA helicase DbpA | - |
| A5478_RS10665 () | 2370529..2371440 | + | 912 | WP_014844327.1 | cation diffusion facilitator family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|