MGE detailed information
MGE type: Genomic_island MGE length: 18706 bp
Accession: NZ_CP015241 Location: 2887001..2905706 Organism: Escherichia coli strain 2013C-4465 Replicon: chromosome
Accession: NZ_CP015241 Location: 2887001..2905706 Organism: Escherichia coli strain 2013C-4465 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A5955_RS14195 () | 2882119..2883297 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| A5955_RS14200 () | 2883365..2884207 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| A5955_RS14205 () | 2884473..2886689 | - | 2217 | WP_064032176.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| A5955_RS14210 () | 2887001..2887267 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| A5955_RS14215 () | 2887264..2888031 | - | 768 | Protein_2682 | hypothetical protein | - |
| A5955_RS14220 () | 2888041..2889192 | - | 1152 | WP_001358746.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| A5955_RS14225 () | 2889308..2890588 | - | 1281 | WP_001037387.1 | DUF445 domain-containing protein | - |
| A5955_RS14230 () | 2890629..2891861 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| A5955_RS14235 () | 2892328..2893260 | + | 933 | WP_000181144.1 | hypothetical protein | VF |
| A5955_RS14240 () | 2893503..2894915 | - | 1413 | WP_000199330.1 | PLP-dependent aminotransferase family protein | - |
| A5955_RS14245 () | 2895092..2895256 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| A5955_RS30260 () | 2895353..2896235 | + | 883 | Protein_2689 | DUF262 domain-containing protein | - |
| A5955_RS30265 () | 2896283..2897446 | + | 1164 | Protein_2690 | DUF1524 domain-containing protein | - |
| A5955_RS14260 () | 2897493..2897834 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - () | 2897829..2897905 | + | 77 | NuclAT_37 | - | Antitoxin Detail |
| - () | 2897829..2897905 | + | 77 | NuclAT_37 | - | Antitoxin Detail |
| - () | 2897829..2897905 | + | 77 | NuclAT_37 | - | Antitoxin Detail |
| - () | 2897829..2897905 | + | 77 | NuclAT_37 | - | Antitoxin Detail |
| - () | 2897829..2897905 | + | 77 | NuclAT_38 | - | Antitoxin Detail |
| - () | 2897829..2897905 | + | 77 | NuclAT_38 | - | Antitoxin Detail |
| - () | 2897829..2897905 | + | 77 | NuclAT_38 | - | Antitoxin Detail |
| - () | 2897829..2897905 | + | 77 | NuclAT_38 | - | Antitoxin Detail |
| A5955_RS14265 () | 2898055..2899809 | - | 1755 | WP_000110083.1 | restriction endonuclease subunit S | - |
| A5955_RS14270 () | 2899809..2901278 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| A5955_RS14275 () | 2901345..2903777 | - | 2433 | WP_000819006.1 | DEAD/DEAH box helicase family protein | - |
| A5955_RS14280 () | 2904055..2904339 | + | 285 | WP_001418369.1 | DUF262 domain-containing protein | - |
| A5955_RS14285 () | 2904348..2905706 | + | 1359 | WP_024201864.1 | DUF262 domain-containing protein | - |
| A5955_RS14290 () | 2905775..2906731 | - | 957 | WP_001297640.1 | GTPase | - |
| A5955_RS14295 () | 2906742..2906945 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| A5955_RS14300 () | 2906995..2909145 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| A5955_RS14310 () | 2909438..2909980 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.001 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.001 |